Project measure / variable:   Bennett4   Y_night_HFHS

ID, description, units MPD:114886   Y_night_HFHS   activity on y-axis total (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis total (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1394.0   n
Median of the strain means1278.0   n
SD of the strain means± 609.0
Coefficient of variation (CV)0.4369
Min–max range of strain means825.7   –   3268.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 34371532.5292 1636739.6442 2.052 0.0124
Residuals 76 60621241.3142 797647.912


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 854.5 183.3   5 81.95 0.2145 674.9, 1161.0 -0.89
CC002/Unc f 1002.0 280.9   5 125.6 0.2802 719.9, 1468.0 -0.64
CC004/TauUnc f 2702.0 1584.0   5 708.3 0.5862 1346.0, 5375.0 2.15
CC006/TauUnc f 1564.0 196.1   4 98.06 0.1254 1337.0, 1808.0 0.28
CC008/GeniUnc f 911.8 151.5   4 75.74 0.1661 747.3, 1043.0 -0.79
CC011/Unc f 1524.0 891.6   5 398.7 0.5849 638.1, 3028.0 0.21
CC012/GeniUnc f 825.7 173.3   4 86.65 0.2099 669.4, 1069.0 -0.93
CC019/TauUnc f 1015.0 61.42   5 27.467 0.0605 917.5, 1075.0 -0.62
CC024/GeniUnc f 1638.0 62.93   2   44.5 0.0384 1593.0, 1682.0 0.4
CC027/GeniUnc f 1981.0 332.9   5 148.9 0.1681 1544.0, 2439.0 0.96
CC028/GeniUnc f 990.2 167.0   4 83.49 0.1686 835.2, 1178.0 -0.66
CC030/GeniUnc f 1061.0 308.7   5 138.1 0.2909 866.5, 1606.0 -0.55
CC032/GeniUnc f 1233.0 336.8   5 150.6 0.2732 945.0, 1779.0 -0.26
CC035/Unc f 1009.0 230.9   5 103.2 0.2287 802.5, 1390.0 -0.63
CC036/Unc f 1471.0 380.6   5 170.2 0.2588 1042.0, 1881.0 0.13
CC037/TauUnc f 1322.0 392.2   5 175.4 0.2966 711.1, 1741.0 -0.12
CC040/TauUnc f 1348.0 248.5   4 124.3 0.1844 1047.0, 1640.0 -0.08
CC041/TauUnc f 885.7 353.3   5 158.0 0.3989 455.8, 1325.0 -0.83
CC045/GeniUnc f 3268.0 3765.0   4 1882.0 1.152 1248.0, 8913.0 3.08
CC059/TauUnc f 950.7 317.9   5 142.2 0.3344 428.7, 1170.0 -0.73
CC063/Unc f 1595.0 228.6   3 132.0 0.1434 1391.0, 1842.0 0.33
CC071/TauUnc f 1516.0 241.1   4 120.6 0.159 1191.0, 1761.0 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 854.48 399.4115451583 1649.9770344675 58.9829655325
CC002/Unc f 1002.42 399.4115451583 1797.9170344675 206.9229655325
CC004/TauUnc f 2702.2 399.4115451583 3497.6970344675 1906.7029655325
CC006/TauUnc f 1563.5 446.555682986 2452.8927224845 674.1072775155
CC008/GeniUnc f 911.8 446.555682986 1801.1927224845 22.4072775155
CC011/Unc f 1524.42 399.4115451583 2319.9170344675 728.9229655325
CC012/GeniUnc f 825.7 446.555682986 1715.0927224845 -63.6927224845
CC019/TauUnc f 1014.94 399.4115451583 1810.4370344675 219.4429655325
CC024/GeniUnc f 1637.5 631.5251032336 2895.2912504135 379.7087495866
CC027/GeniUnc f 1980.8 399.4115451583 2776.2970344675 1185.3029655325
CC028/GeniUnc f 990.225 446.555682986 1879.6177224845 100.8322775155
CC030/GeniUnc f 1061.38 399.4115451583 1856.8770344675 265.8829655325
CC032/GeniUnc f 1232.82 399.4115451583 2028.3170344675 437.3229655325
CC035/Unc f 1009.32 399.4115451583 1804.8170344675 213.8229655325
CC036/Unc f 1470.8 399.4115451583 2266.2970344675 675.3029655325
CC037/TauUnc f 1322.42 399.4115451583 2117.9170344675 526.9229655325
CC040/TauUnc f 1347.5 446.555682986 2236.8927224845 458.1072775155
CC041/TauUnc f 885.74 399.4115451583 1681.2370344675 90.2429655325
CC045/GeniUnc f 3268.25 446.555682986 4157.6427224845 2378.8572775155
CC059/TauUnc f 950.7 399.4115451583 1746.1970344675 155.2029655325
CC063/Unc f 1594.6666666667 515.6380875603 2621.6489221501 567.6844111833
CC071/TauUnc f 1516.25 446.555682986 2405.6427224845 626.8572775155




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA