Project measure / variable:   Bennett4   Y_day_HFHS

ID, description, units MPD:114884   Y_day_HFHS   activity on y-axis total (beam breaks), day   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis total (beam breaks), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means556.6   n
Median of the strain means499.9   n
SD of the strain means± 186.6
Coefficient of variation (CV)0.3352
Min–max range of strain means310.8   –   976.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 3340711.597 159081.5046 3.1314 0.0001
Residuals 76 3860979.5217 50802.3621


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 486.6 175.3   5 78.4 0.3603 293.5, 718.3 -0.38
CC002/Unc f 628.9 135.0   5 60.38 0.2147 479.4, 786.1 0.39
CC004/TauUnc f 744.6 249.0   5 111.4 0.3344 302.4, 890.7 1.01
CC006/TauUnc f 431.2 64.67   4 32.337 0.15 350.2, 490.1 -0.67
CC008/GeniUnc f 624.0 234.3   4 117.2 0.3755 352.0, 829.5 0.36
CC011/Unc f 805.0 373.6   5 167.1 0.4641 539.6, 1426.0 1.33
CC012/GeniUnc f 420.4 15.174   4 7.5872 0.0361 410.5, 442.9 -0.73
CC019/TauUnc f 473.2 102.0   5 45.601 0.2155 297.2, 562.5 -0.45
CC024/GeniUnc f 544.8 123.2   2   87.15 0.2262 457.6, 631.9 -0.06
CC027/GeniUnc f 976.0 185.9   5 83.15 0.1905 716.8, 1212.0 2.25
CC028/GeniUnc f 454.1 105.0   4 52.5 0.2313 311.0, 537.5 -0.55
CC030/GeniUnc f 338.5 70.87   5 31.692 0.2094 253.4, 447.4 -1.17
CC032/GeniUnc f 668.4 274.4   5 122.7 0.4105 391.2, 1126.0 0.6
CC035/Unc f 513.2 108.6   5 48.567 0.2116 405.4, 677.9 -0.23
CC036/Unc f 439.7 191.1   5 85.47 0.4347 186.2, 639.4 -0.63
CC037/TauUnc f 483.3 220.0   5 98.39 0.4552 98.35, 611.5 -0.39
CC040/TauUnc f 574.3 196.9   4 98.44 0.3428 296.2, 760.2 0.09
CC041/TauUnc f 310.8 169.3   5 75.72 0.5448 62.71, 522.8 -1.32
CC045/GeniUnc f 953.3 647.9   4 324.0 0.6797 524.4, 1909.0 2.13
CC059/TauUnc f 373.1 224.0   5 100.2 0.6003 126.6, 571.2 -0.98
CC063/Unc f 338.8 136.2   3 78.61 0.4019 232.0, 492.1 -1.17
CC071/TauUnc f 663.0 73.83   4 36.914 0.1114 578.5, 757.8 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 486.62 100.7991687746 687.3789435233 285.8610564767
CC002/Unc f 628.86 100.7991687746 829.6189435233 428.1010564767
CC004/TauUnc f 744.56 100.7991687746 945.3189435233 543.8010564767
CC006/TauUnc f 431.225 112.6968967277 655.6803224046 206.7696775954
CC008/GeniUnc f 624.0 112.6968967277 848.4553224046 399.5446775954
CC011/Unc f 805.04 100.7991687746 1005.7989435233 604.2810564767
CC012/GeniUnc f 420.425 112.6968967277 644.8803224046 195.9696775954
CC019/TauUnc f 473.22 100.7991687746 673.9789435233 272.4610564767
CC024/GeniUnc f 544.75 159.3774797897 862.1777610914 227.3222389086
CC027/GeniUnc f 975.96 100.7991687746 1176.7189435233 775.2010564767
CC028/GeniUnc f 454.075 112.6968967277 678.5303224046 229.6196775954
CC030/GeniUnc f 338.46 100.7991687746 539.2189435233 137.7010564767
CC032/GeniUnc f 668.38 100.7991687746 869.1389435233 467.6210564767
CC035/Unc f 513.2 100.7991687746 713.9589435233 312.4410564767
CC036/Unc f 439.66 100.7991687746 640.4189435233 238.9010564767
CC037/TauUnc f 483.27 100.7991687746 684.0289435233 282.5110564767
CC040/TauUnc f 574.3 112.6968967277 798.7553224046 349.8446775954
CC041/TauUnc f 310.802 100.7991687746 511.5609435233 110.0430564767
CC045/GeniUnc f 953.275 112.6968967277 1177.7303224046 728.8196775954
CC059/TauUnc f 373.08 100.7991687746 573.8389435233 172.3210564767
CC063/Unc f 338.7666666667 130.1311673252 597.9453482893 79.587985044
CC071/TauUnc f 663.0 112.6968967277 887.4553224046 438.5446775954




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA