Project measure / variable:   Bennett4   X_fine_ave_HP

ID, description, units MPD:114881   X_fine_ave_HP   activity on x-axis fine movement (beam breaks), average for day and night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis fine movement (beam breaks), average for day and night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means352.8   n
Median of the strain means330.3   n
SD of the strain means± 104.7
Coefficient of variation (CV)0.2966
Min–max range of strain means182.7   –   724.4   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1130377.031 53827.4777 10.1887 < 0.0001
Residuals 78 412077.3369 5283.0428


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 325.0 14.985   5 6.7016 0.0461 307.4, 344.8 -0.27
CC002/Unc f 282.2 29.891   5 13.368 0.1059 237.7, 314.7 -0.67
CC004/TauUnc f 724.4 180.3   5 80.65 0.2489 512.0, 999.1 3.55
CC006/TauUnc f 435.8 29.004   4 14.502 0.0666 395.1, 462.7 0.79
CC008/GeniUnc f 391.6 30.449   4 15.225 0.0778 355.9, 425.0 0.37
CC011/Unc f 328.1 131.4   5 58.78 0.4007 129.5, 477.7 -0.24
CC012/GeniUnc f 281.2 17.983   5 8.0424 0.0639 252.0, 300.6 -0.68
CC019/TauUnc f 283.7 18.567   5 8.3032 0.0655 258.7, 305.4 -0.66
CC024/GeniUnc f 346.8 26.022   2   18.4 0.075 328.4, 365.2 -0.06
CC027/GeniUnc f 484.2 70.69   5 31.615 0.146 416.3, 575.9 1.26
CC028/GeniUnc f 316.6 38.825   4 19.412 0.1226 287.0, 372.1 -0.35
CC030/GeniUnc f 182.7 123.3   5 55.15 0.6748 11.118, 329.0 -1.63
CC032/GeniUnc f 334.4 57.44   5 25.686 0.1718 262.4, 397.3 -0.18
CC035/Unc f 317.9 75.91   5 33.95 0.2388 209.5, 378.5 -0.33
CC036/Unc f 379.2 57.53   4 28.765 0.1517 322.7, 438.3 0.25
CC037/TauUnc f 340.5 54.28   5 24.275 0.1594 277.8, 416.9 -0.12
CC040/TauUnc f 327.5 30.982   5 13.856 0.0946 284.2, 360.8 -0.24
CC041/TauUnc f 260.0 64.53   5 28.861 0.2482 197.7, 351.6 -0.89
CC045/GeniUnc f 430.6 50.05   4 25.026 0.1162 373.1, 495.1 0.74
CC059/TauUnc f 341.8 43.984   5 19.67 0.1287 272.9, 382.4 -0.1
CC063/Unc f 314.6 13.328   3 7.6947 0.0424 304.2, 329.6 -0.36
CC071/TauUnc f 332.5 71.32   5 31.896 0.2145 228.9, 426.3 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 325.02 32.5055157799 389.7335108106 260.3064891894
CC002/Unc f 282.22 32.5055157799 346.9335108106 217.5064891894
CC004/TauUnc f 724.4 32.5055157799 789.1135108106 659.6864891894
CC006/TauUnc f 435.825 36.3422714638 508.1769046176 363.4730953824
CC008/GeniUnc f 391.55 36.3422714638 463.9019046176 319.1980953824
CC011/Unc f 328.06 32.5055157799 392.7735108106 263.3464891894
CC012/GeniUnc f 281.22 32.5055157799 345.9335108106 216.5064891894
CC019/TauUnc f 283.66 32.5055157799 348.3735108106 218.9464891894
CC024/GeniUnc f 346.8 51.3957331915 449.1210447738 244.4789552262
CC027/GeniUnc f 484.22 32.5055157799 548.9335108106 419.5064891894
CC028/GeniUnc f 316.65 36.3422714638 389.0019046176 244.2980953824
CC030/GeniUnc f 182.7436 32.5055157799 247.4571108106 118.0300891894
CC032/GeniUnc f 334.36 32.5055157799 399.0735108106 269.6464891894
CC035/Unc f 317.9 32.5055157799 382.6135108106 253.1864891894
CC036/Unc f 379.175 36.3422714638 451.5269046176 306.8230953824
CC037/TauUnc f 340.5 32.5055157799 405.2135108106 275.7864891894
CC040/TauUnc f 327.46 32.5055157799 392.1735108106 262.7464891894
CC041/TauUnc f 260.04 32.5055157799 324.7535108106 195.3264891894
CC045/GeniUnc f 430.65 36.3422714638 503.0019046176 358.2980953824
CC059/TauUnc f 341.82 32.5055157799 406.5335108106 277.1064891894
CC063/Unc f 314.5666666667 41.9644404252 398.1114498814 231.0218834519
CC071/TauUnc f 332.46 32.5055157799 397.1735108106 267.7464891894




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA