Project measure / variable:   Bennett4   X_fine_night_HFHS

ID, description, units MPD:114880   X_fine_night_HFHS   activity on x-axis fine movement (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis fine movement (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means426.9   n
Median of the strain means380.4   n
SD of the strain means± 112.2
Coefficient of variation (CV)0.2627
Min–max range of strain means318.6   –   743.5   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1139885.3828 54280.2563 1.832 0.0297
Residuals 76 2251838.5207 29629.4542


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 378.3 36.362   5 16.261 0.0961 337.9, 430.4 -0.43
CC002/Unc f 320.1 72.98   5 32.636 0.228 220.3, 399.4 -0.95
CC004/TauUnc f 597.0 167.7   5 75.01 0.281 402.9, 796.5 1.52
CC006/TauUnc f 427.6 234.6   4 117.3 0.5486 80.53, 594.4 0.01
CC008/GeniUnc f 325.0 105.2   4 52.58 0.3236 173.9, 410.9 -0.91
CC011/Unc f 419.5 86.42   5 38.647 0.206 277.1, 506.1 -0.07
CC012/GeniUnc f 318.6 56.33   4 28.164 0.1768 264.9, 384.4 -0.97
CC019/TauUnc f 341.6 43.154   5 19.299 0.1263 298.5, 411.4 -0.76
CC024/GeniUnc f 539.0 6.5054   2   4.6 0.0121 534.4, 543.6 1.0
CC027/GeniUnc f 617.3 71.23   5 31.855 0.1154 526.9, 690.1 1.7
CC028/GeniUnc f 375.5 115.6   4 57.78 0.3078 236.9, 518.2 -0.46
CC030/GeniUnc f 377.4 61.69   5 27.587 0.1635 299.0, 462.6 -0.44
CC032/GeniUnc f 404.3 90.1   5 40.294 0.2229 310.9, 520.6 -0.2
CC035/Unc f 367.7 112.2   5 50.17 0.3051 220.1, 525.2 -0.53
CC036/Unc f 461.2 108.8   5 48.67 0.236 302.4, 555.4 0.31
CC037/TauUnc f 382.4 209.3   5 93.62 0.5474 121.0, 580.0 -0.4
CC040/TauUnc f 422.3 62.54   4 31.268 0.1481 328.5, 455.6 -0.04
CC041/TauUnc f 332.1 155.0   5 69.3 0.4666 135.9, 535.1 -0.84
CC045/GeniUnc f 743.5 641.8   4 320.9 0.8632 383.6, 1703.0 2.82
CC059/TauUnc f 338.1 166.2   5 74.34 0.4916 115.8, 471.0 -0.79
CC063/Unc f 371.9 93.86   3 54.19 0.2524 274.6, 461.9 -0.49
CC071/TauUnc f 530.7 70.21   4 35.105 0.1323 451.3, 590.5 0.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 378.34 76.9798080271 531.6585751432 225.0214248568
CC002/Unc f 320.06 76.9798080271 473.3785751432 166.7414248568
CC004/TauUnc f 597.0 76.9798080271 750.3185751432 443.6814248568
CC006/TauUnc f 427.5825 86.0660418217 598.9978781168 256.1671218832
CC008/GeniUnc f 325.025 86.0660418217 496.4403781168 153.6096218832
CC011/Unc f 419.46 76.9798080271 572.7785751432 266.1414248568
CC012/GeniUnc f 318.575 86.0660418217 489.9903781168 147.1596218832
CC019/TauUnc f 341.6 76.9798080271 494.9185751432 188.2814248568
CC024/GeniUnc f 539.0 121.715763604 781.4179525321 296.5820474679
CC027/GeniUnc f 617.34 76.9798080271 770.6585751432 464.0214248568
CC028/GeniUnc f 375.525 86.0660418217 546.9403781168 204.1096218832
CC030/GeniUnc f 377.38 76.9798080271 530.6985751432 224.0614248568
CC032/GeniUnc f 404.26 76.9798080271 557.5785751432 250.9414248568
CC035/Unc f 367.74 76.9798080271 521.0585751432 214.4214248568
CC036/Unc f 461.16 76.9798080271 614.4785751432 307.8414248568
CC037/TauUnc f 382.4 76.9798080271 535.7185751432 229.0814248568
CC040/TauUnc f 422.275 86.0660418217 593.6903781168 250.8596218832
CC041/TauUnc f 332.08 76.9798080271 485.3985751432 178.7614248568
CC045/GeniUnc f 743.525 86.0660418217 914.9403781168 572.1096218832
CC059/TauUnc f 338.14 76.9798080271 491.4585751432 184.8214248568
CC063/Unc f 371.9 99.3805048277 569.8334293979 173.9665706021
CC071/TauUnc f 530.725 86.0660418217 702.1403781168 359.3096218832




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA