Project measure / variable:   Bennett4   X_fine_day_HFHS

ID, description, units MPD:114878   X_fine_day_HFHS   activity on x-axis fine movement (beam breaks), day   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis fine movement (beam breaks), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means224.9   n
Median of the strain means226.1   n
SD of the strain means± 49.287
Coefficient of variation (CV)0.2192
Min–max range of strain means125.0   –   336.4   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 215662.2397 10269.6305 1.4464 0.1243
Residuals 76 539625.9691 7100.3417


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 257.7 70.42   5 31.495 0.2733 186.8, 348.4 0.67
CC002/Unc f 249.8 37.729   5 16.873 0.151 207.5, 300.5 0.51
CC004/TauUnc f 236.5 113.0   5 50.53 0.4777 80.82, 350.6 0.24
CC006/TauUnc f 160.7 91.38   4 45.691 0.5686 35.118, 247.4 -1.3
CC008/GeniUnc f 253.2 128.9   4 64.45 0.509 62.59, 343.8 0.57
CC011/Unc f 271.4 90.6   5 40.518 0.3339 182.0, 422.0 0.94
CC012/GeniUnc f 199.6 11.005   4 5.5025 0.0551 184.8, 211.4 -0.51
CC019/TauUnc f 201.8 49.865   5 22.3 0.2471 122.4, 248.7 -0.47
CC024/GeniUnc f 270.5 45.75   2   32.35 0.1691 238.2, 302.9 0.93
CC027/GeniUnc f 336.4 32.195   5 14.398 0.0957 300.1, 386.5 2.26
CC028/GeniUnc f 192.5 78.18   4 39.092 0.4061 76.53, 247.1 -0.66
CC030/GeniUnc f 199.6 41.709   5 18.653 0.2089 143.2, 245.0 -0.51
CC032/GeniUnc f 241.4 56.58   5 25.303 0.2344 195.6, 330.9 0.34
CC035/Unc f 215.6 91.72   5 41.018 0.4254 90.5, 327.6 -0.19
CC036/Unc f 204.5 92.96   5 41.573 0.4546 52.29, 294.6 -0.41
CC037/TauUnc f 177.7 124.9   5 55.86 0.703 25.824, 287.6 -0.96
CC040/TauUnc f 240.0 68.35   4 34.176 0.2848 144.8, 307.1 0.31
CC041/TauUnc f 166.3 102.9   5 46.003 0.6186 15.176, 268.6 -1.19
CC045/GeniUnc f 279.8 141.9   4 70.93 0.507 143.7, 477.4 1.11
CC059/TauUnc f 184.1 99.19   5 44.361 0.5387 40.706, 284.6 -0.83
CC063/Unc f 125.0 60.45   3 34.903 0.4838 55.35, 164.4 -2.03
CC071/TauUnc f 283.2 47.064   4 23.532 0.1662 233.2, 326.7 1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 257.68 37.6837941245 332.7337805853 182.6262194147
CC002/Unc f 249.78 37.6837941245 324.8337805853 174.7262194147
CC004/TauUnc f 236.504 37.6837941245 311.5577805853 161.4502194147
CC006/TauUnc f 160.7045 42.1317626563 244.6171776785 76.7918223215
CC008/GeniUnc f 253.2475 42.1317626563 337.1601776785 169.3348223215
CC011/Unc f 271.36 37.6837941245 346.4137805853 196.3062194147
CC012/GeniUnc f 199.625 42.1317626563 283.5376776785 115.7123223215
CC019/TauUnc f 201.84 37.6837941245 276.8937805853 126.7862194147
CC024/GeniUnc f 270.55 59.5833101552 389.220446828 151.879553172
CC027/GeniUnc f 336.44 37.6837941245 411.4937805853 261.3862194147
CC028/GeniUnc f 192.5075 42.1317626563 276.4201776785 108.5948223215
CC030/GeniUnc f 199.64 37.6837941245 274.6937805853 124.5862194147
CC032/GeniUnc f 241.36 37.6837941245 316.4137805853 166.3062194147
CC035/Unc f 215.6 37.6837941245 290.6537805853 140.5462194147
CC036/Unc f 204.498 37.6837941245 279.5517805853 129.4442194147
CC037/TauUnc f 177.6708 37.6837941245 252.7245805853 102.6170194147
CC040/TauUnc f 239.975 42.1317626563 323.8876776785 156.0623223215
CC041/TauUnc f 166.2952 37.6837941245 241.3489805853 91.2414194147
CC045/GeniUnc f 279.825 42.1317626563 363.7376776785 195.9123223215
CC059/TauUnc f 184.1212 37.6837941245 259.1749805853 109.0674194147
CC063/Unc f 124.95 48.6495690221 221.8440140923 28.0559859077
CC071/TauUnc f 283.225 42.1317626563 367.1376776785 199.3123223215




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA