Project measure / variable:   Bennett4   X_amb_ave_HFHS

ID, description, units MPD:114876   X_amb_ave_HFHS   activity on x-axis ambulatory movement (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis ambulatory movement (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means631.8   n
Median of the strain means534.0   n
SD of the strain means± 350.0
Coefficient of variation (CV)0.5539
Min–max range of strain means366.2   –   1883.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 11090710.4415 528129.0686 2.0309 0.0135
Residuals 76 19763444.0053 260045.3159


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 399.6 67.54   5 30.206 0.169 327.3, 478.4 -0.66
CC002/Unc f 392.7 126.1   5 56.38 0.321 212.1, 515.1 -0.68
CC004/TauUnc f 1205.0 416.4   5 186.2 0.3456 718.1, 1762.0 1.64
CC006/TauUnc f 564.6 321.4   4 160.7 0.5693 98.47, 834.6 -0.19
CC008/GeniUnc f 492.8 190.8   4 95.41 0.3872 267.0, 682.0 -0.4
CC011/Unc f 536.7 178.7   5 79.9 0.3329 361.3, 809.8 -0.27
CC012/GeniUnc f 368.2 93.98   4 46.992 0.2552 289.2, 502.3 -0.75
CC019/TauUnc f 480.9 61.94   5 27.701 0.1288 380.6, 538.9 -0.43
CC024/GeniUnc f 728.0 67.25   2   47.55 0.0924 680.5, 775.6 0.27
CC027/GeniUnc f 1063.0 220.2   5 98.49 0.2071 782.2, 1338.0 1.23
CC028/GeniUnc f 394.5 148.7   4 74.35 0.3769 234.4, 590.2 -0.68
CC030/GeniUnc f 475.5 68.82   5 30.776 0.1447 409.9, 551.5 -0.45
CC032/GeniUnc f 622.1 137.3   5 61.42 0.2208 460.5, 836.5 -0.03
CC035/Unc f 440.9 182.2   5 81.47 0.4132 207.2, 707.3 -0.55
CC036/Unc f 663.2 146.6   5 65.56 0.2211 469.9, 877.4 0.09
CC037/TauUnc f 536.7 284.9   5 127.4 0.5308 198.7, 810.4 -0.27
CC040/TauUnc f 651.6 210.6   4 105.3 0.3231 358.8, 855.9 0.06
CC041/TauUnc f 366.2 178.5   5 79.82 0.4874 165.1, 583.7 -0.76
CC045/GeniUnc f 1883.0 2373.0   4 1186.0 1.2603 577.4, 5440.0 3.58
CC059/TauUnc f 439.0 210.6   5 94.2 0.4798 141.6, 624.9 -0.55
CC063/Unc f 531.2 217.6   3 125.6 0.4097 329.1, 761.6 -0.29
CC071/TauUnc f 664.6 153.8   4 76.88 0.2314 488.5, 862.1 0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 399.64 228.0549564731 853.8508103012 -54.5708103012
CC002/Unc f 392.72 228.0549564731 846.9308103012 -61.4908103012
CC004/TauUnc f 1204.8 228.0549564731 1659.0108103012 750.5891896988
CC006/TauUnc f 564.5675 254.9731926398 1072.3906239744 56.7443760256
CC008/GeniUnc f 492.775 254.9731926398 1000.5981239744 -15.0481239744
CC011/Unc f 536.68 228.0549564731 990.8908103012 82.4691896988
CC012/GeniUnc f 368.2 254.9731926398 876.0231239744 -139.6231239744
CC019/TauUnc f 480.9 228.0549564731 935.1108103012 26.6891896988
CC024/GeniUnc f 728.05 360.5865470728 1446.2203492112 9.8796507888
CC027/GeniUnc f 1063.3 228.0549564731 1517.5108103012 609.0891896988
CC028/GeniUnc f 394.525 254.9731926398 902.3481239744 -113.2981239744
CC030/GeniUnc f 475.5 228.0549564731 929.7108103012 21.2891896988
CC032/GeniUnc f 622.14 228.0549564731 1076.3508103012 167.9291896988
CC035/Unc f 440.86 228.0549564731 895.0708103012 -13.3508103012
CC036/Unc f 663.2 228.0549564731 1117.4108103012 208.9891896988
CC037/TauUnc f 536.7 228.0549564731 990.9108103012 82.4891896988
CC040/TauUnc f 651.65 254.9731926398 1159.4731239744 143.8268760256
CC041/TauUnc f 366.16 228.0549564731 820.3708103012 -88.0508103012
CC045/GeniUnc f 1882.95 254.9731926398 2390.7731239744 1375.1268760256
CC059/TauUnc f 439.04 228.0549564731 893.2508103012 -15.1708103012
CC063/Unc f 531.2333333333 294.4176828135 1117.616967988 -55.1503013213
CC071/TauUnc f 664.65 254.9731926398 1172.4731239744 156.8268760256




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA