Project measure / variable:   Bennett4   X_amb_ave_HP

ID, description, units MPD:114875   X_amb_ave_HP   activity on x-axis ambulatory movement (beam breaks), average for day and night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis ambulatory movement (beam breaks), average for day and night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means669.6   n
Median of the strain means539.9   n
SD of the strain means± 420.2
Coefficient of variation (CV)0.6275
Min–max range of strain means327.9   –   2367.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 18255106.2604 869290.7743 21.4151 < 0.0001
Residuals 78 3166204.9116 40592.3707


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 475.4 58.37   5 26.104 0.1228 426.4, 574.6 -0.46
CC002/Unc f 443.4 110.5   5 49.415 0.2492 355.1, 605.5 -0.54
CC004/TauUnc f 2367.0 610.2   5 272.9 0.2578 1689.0, 3321.0 4.04
CC006/TauUnc f 944.0 25.944   4 12.972 0.0275 919.1, 973.1 0.65
CC008/GeniUnc f 653.9 156.0   4 77.99 0.2385 459.9, 839.0 -0.04
CC011/Unc f 562.4 259.2   5 115.9 0.461 248.5, 948.3 -0.26
CC012/GeniUnc f 327.9 23.624   5 10.565 0.072 287.0, 347.4 -0.81
CC019/TauUnc f 538.9 46.818   5 20.938 0.0869 487.2, 603.4 -0.31
CC024/GeniUnc f 478.4 76.16   2   53.85 0.1592 424.5, 532.2 -0.46
CC027/GeniUnc f 994.2 250.9   5 112.2 0.2524 803.6, 1364.0 0.77
CC028/GeniUnc f 495.3 71.53   4 35.765 0.1444 408.0, 577.1 -0.41
CC030/GeniUnc f 344.4 252.6   5 113.0 0.7335 40.382, 667.1 -0.77
CC032/GeniUnc f 676.0 110.3   5 49.33 0.1632 573.4, 810.3 0.02
CC035/Unc f 497.0 172.6   5 77.19 0.3473 291.1, 661.5 -0.41
CC036/Unc f 707.0 154.6   4 77.29 0.2186 476.7, 809.0 0.09
CC037/TauUnc f 513.8 120.9   5 54.05 0.2353 417.7, 722.1 -0.37
CC040/TauUnc f 647.7 143.1   5 64.02 0.221 471.9, 846.9 -0.05
CC041/TauUnc f 391.5 154.4   5 69.03 0.3943 234.5, 572.6 -0.66
CC045/GeniUnc f 927.5 183.2   4 91.62 0.1976 748.1, 1149.0 0.61
CC059/TauUnc f 520.7 99.82   5 44.642 0.1917 353.4, 598.3 -0.35
CC063/Unc f 684.7 81.58   3 47.103 0.1191 592.3, 746.7 0.04
CC071/TauUnc f 540.9 159.7   5 71.41 0.2952 313.3, 735.6 -0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 475.36 90.1025756148 654.7404485552 295.9795514448
CC002/Unc f 443.36 90.1025756148 622.7404485552 263.9795514448
CC004/TauUnc f 2367.0 90.1025756148 2546.3804485552 2187.6195514449
CC006/TauUnc f 944.05 100.7377420113 1144.6034384019 743.4965615981
CC008/GeniUnc f 653.9 100.7377420113 854.4534384019 453.3465615981
CC011/Unc f 562.36 90.1025756148 741.7404485552 382.9795514448
CC012/GeniUnc f 327.9 90.1025756148 507.2804485552 148.5195514448
CC019/TauUnc f 538.94 90.1025756148 718.3204485552 359.5595514448
CC024/GeniUnc f 478.35 142.4646809952 761.9753925685 194.7246074315
CC027/GeniUnc f 994.22 90.1025756148 1173.6004485552 814.8395514448
CC028/GeniUnc f 495.325 100.7377420113 695.8784384019 294.7715615981
CC030/GeniUnc f 344.4164 90.1025756148 523.7968485552 165.0359514448
CC032/GeniUnc f 676.02 90.1025756148 855.4004485552 496.6395514448
CC035/Unc f 497.0 90.1025756148 676.3804485552 317.6195514448
CC036/Unc f 707.025 100.7377420113 907.5784384019 506.4715615981
CC037/TauUnc f 513.76 90.1025756148 693.1404485552 334.3795514448
CC040/TauUnc f 647.7 90.1025756148 827.0804485552 468.3195514448
CC041/TauUnc f 391.5 90.1025756148 570.8804485552 212.1195514448
CC045/GeniUnc f 927.55 100.7377420113 1128.1034384019 726.9965615981
CC059/TauUnc f 520.72 90.1025756148 700.1004485552 341.3395514448
CC063/Unc f 684.7333333333 116.3219249355 916.3124966298 453.1541700369
CC071/TauUnc f 540.88 90.1025756148 720.2604485552 361.4995514448




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA