Project measure / variable:   Bennett4   X_amb_night_HFHS

ID, description, units MPD:114874   X_amb_night_HFHS   activity on x-axis ambulatory movement (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis ambulatory movement (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means934.7   n
Median of the strain means778.4   n
SD of the strain means± 567.3
Coefficient of variation (CV)0.607
Min–max range of strain means478.0   –   2981.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 29038435.3252 1382782.6345 1.8569 0.0269
Residuals 76 56594836.2525 744668.8981


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 510.4 64.89   5 29.021 0.1271 458.2, 623.1 -0.75
CC002/Unc f 478.0 170.6   5 76.3 0.3569 248.6, 654.2 -0.8
CC004/TauUnc f 1897.0 797.8   5 356.8 0.4205 1048.0, 2764.0 1.7
CC006/TauUnc f 936.4 557.7   4 278.8 0.5955 142.7, 1450.0 0.0
CC008/GeniUnc f 587.4 152.4   4 76.2 0.2594 388.8, 731.1 -0.61
CC011/Unc f 718.4 228.8   5 102.3 0.3185 355.9, 922.1 -0.38
CC012/GeniUnc f 515.2 168.5   4 84.26 0.3271 394.4, 762.4 -0.74
CC019/TauUnc f 691.6 49.97   5 22.347 0.0723 638.9, 742.9 -0.43
CC024/GeniUnc f 1137.0 48.083   2   34.0 0.0423 1103.0, 1171.0 0.36
CC027/GeniUnc f 1458.0 394.9   5 176.6 0.2709 921.2, 1937.0 0.92
CC028/GeniUnc f 574.0 246.5   4 123.3 0.4295 357.5, 921.5 -0.64
CC030/GeniUnc f 751.7 116.5   5 52.1 0.155 648.4, 944.0 -0.32
CC032/GeniUnc f 827.8 335.8   5 150.2 0.4056 565.4, 1392.0 -0.19
CC035/Unc f 595.5 232.6   5 104.0 0.3907 297.4, 946.6 -0.6
CC036/Unc f 1058.0 228.2   5 102.1 0.2156 821.5, 1371.0 0.22
CC037/TauUnc f 805.0 435.2   5 194.6 0.5406 230.4, 1260.0 -0.23
CC040/TauUnc f 929.0 246.8   4 123.4 0.2657 593.5, 1165.0 -0.01
CC041/TauUnc f 569.4 267.0   5 119.4 0.469 290.1, 852.0 -0.64
CC045/GeniUnc f 2981.0 4038.0   4 2019.0 1.3546 856.4, 9037.0 3.61
CC059/TauUnc f 645.0 287.8   5 128.7 0.4462 201.5, 865.1 -0.51
CC063/Unc f 932.7 356.2   3 205.7 0.3819 578.6, 1291.0 0.0
CC071/TauUnc f 964.0 214.7   4 107.4 0.2228 699.6, 1221.0 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 510.38 385.9193952263 1279.0050890029 -258.2450890029
CC002/Unc f 477.98 385.9193952263 1246.6050890029 -290.6450890029
CC004/TauUnc f 1897.2 385.9193952263 2665.8250890029 1128.5749109971
CC006/TauUnc f 936.425 431.4710007808 1795.7739741111 77.0760258889
CC008/GeniUnc f 587.425 431.4710007808 1446.7739741111 -271.9239741111
CC011/Unc f 718.4 385.9193952263 1487.0250890029 -50.2250890029
CC012/GeniUnc f 515.2 431.4710007808 1374.5489741111 -344.1489741111
CC019/TauUnc f 691.56 385.9193952263 1460.1850890029 -77.0650890029
CC024/GeniUnc f 1137.0 610.1921410749 2352.3029739994 -78.3029739994
CC027/GeniUnc f 1457.84 385.9193952263 2226.4650890029 689.2149109971
CC028/GeniUnc f 574.0 431.4710007808 1433.3489741111 -285.3489741111
CC030/GeniUnc f 751.72 385.9193952263 1520.3450890029 -16.9050890029
CC032/GeniUnc f 827.82 385.9193952263 1596.4450890029 59.1949109971
CC035/Unc f 595.48 385.9193952263 1364.1050890029 -173.1450890029
CC036/Unc f 1058.4 385.9193952263 1827.0250890029 289.7749109971
CC037/TauUnc f 804.98 385.9193952263 1573.6050890029 36.3549109971
CC040/TauUnc f 929.0 431.4710007808 1788.3489741111 69.6510258889
CC041/TauUnc f 569.38 385.9193952263 1338.0050890029 -199.2450890029
CC045/GeniUnc f 2981.05 431.4710007808 3840.3989741111 2121.7010258889
CC059/TauUnc f 645.0 385.9193952263 1413.6250890029 -123.6250890029
CC063/Unc f 932.7 498.2197968966 1924.9907230618 -59.5907230618
CC071/TauUnc f 963.975 431.4710007808 1823.3239741111 104.6260258889




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA