Project measure / variable:   Bennett4   X_amb_day_HFHS

ID, description, units MPD:114872   X_amb_day_HFHS   activity on x-axis ambulatory movement (beam breaks), day   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis ambulatory movement (beam breaks), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means330.8   n
Median of the strain means288.9   n
SD of the strain means± 158.0
Coefficient of variation (CV)0.4776
Min–max range of strain means129.7   –   785.2   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2281933.582 108663.5039 2.8161 0.0005
Residuals 76 2932617.0278 38587.0662


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 289.0 103.7   5 46.385 0.3589 196.4, 446.4 -0.26
CC002/Unc f 308.4 94.75   5 42.374 0.3072 175.5, 430.9 -0.14
CC004/TauUnc f 512.7 218.5   5 97.69 0.4261 203.8, 760.8 1.15
CC006/TauUnc f 198.1 105.5   4 52.73 0.5323 54.24, 307.9 -0.84
CC008/GeniUnc f 398.1 232.0   4 116.0 0.5826 145.2, 632.9 0.43
CC011/Unc f 355.0 209.1   5 93.51 0.589 160.8, 697.6 0.15
CC012/GeniUnc f 221.2 27.153   4 13.576 0.1228 184.0, 242.1 -0.69
CC019/TauUnc f 270.2 85.74   5 38.345 0.3173 119.6, 334.8 -0.38
CC024/GeniUnc f 318.6 86.2   2   60.95 0.2705 257.7, 379.6 -0.08
CC027/GeniUnc f 673.9 108.2   5 48.387 0.1606 503.8, 783.9 2.17
CC028/GeniUnc f 216.5 70.3   4 35.151 0.3246 111.4, 258.9 -0.72
CC030/GeniUnc f 199.3 84.16   5 37.636 0.4224 129.6, 342.8 -0.83
CC032/GeniUnc f 416.4 161.9   5 72.4 0.3888 280.9, 683.7 0.54
CC035/Unc f 288.9 133.1   5 59.53 0.4607 122.0, 468.0 -0.27
CC036/Unc f 275.6 141.9   5 63.44 0.5148 89.35, 425.2 -0.35
CC037/TauUnc f 268.5 152.3   5 68.1 0.5672 50.82, 402.6 -0.39
CC040/TauUnc f 378.8 179.9   4 89.95 0.4749 124.0, 547.4 0.3
CC041/TauUnc f 167.6 108.5   5 48.521 0.6473 40.118, 323.2 -1.03
CC045/GeniUnc f 785.2 717.2   4 358.6 0.9134 298.3, 1844.0 2.88
CC059/TauUnc f 236.3 145.6   5 65.12 0.6163 77.82, 384.7 -0.6
CC063/Unc f 129.7 88.58   3 51.14 0.6828 77.47, 232.0 -1.27
CC071/TauUnc f 369.6 95.41   4 47.707 0.2582 277.5, 503.4 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 288.96 87.848808933 463.9260665417 113.9939334583
CC002/Unc f 308.44 87.848808933 483.4060665417 133.4739334583
CC004/TauUnc f 512.68 87.848808933 687.6460665417 337.7139334583
CC006/TauUnc f 198.11 98.2179542583 393.7280092715 2.4919907285
CC008/GeniUnc f 398.125 98.2179542583 593.7430092715 202.5069907285
CC011/Unc f 355.0 87.848808933 529.9660665417 180.0339334583
CC012/GeniUnc f 221.175 98.2179542583 416.7930092715 25.5569907285
CC019/TauUnc f 270.2 87.848808933 445.1660665417 95.2339334583
CC024/GeniUnc f 318.65 138.9011629806 595.2956417562 42.0043582438
CC027/GeniUnc f 673.86 87.848808933 848.8260665417 498.8939334583
CC028/GeniUnc f 216.55 98.2179542583 412.1680092715 20.9319907285
CC030/GeniUnc f 199.26 87.848808933 374.2260665417 24.2939334583
CC032/GeniUnc f 416.4 87.848808933 591.3660665417 241.4339334583
CC035/Unc f 288.94 87.848808933 463.9060665417 113.9739334583
CC036/Unc f 275.57 87.848808933 450.5360665417 100.6039334583
CC037/TauUnc f 268.504 87.848808933 443.4700665417 93.5379334583
CC040/TauUnc f 378.825 98.2179542583 574.4430092715 183.2069907285
CC041/TauUnc f 167.6116 87.848808933 342.5776665417 -7.3544665417
CC045/GeniUnc f 785.175 98.2179542583 980.7930092715 589.5569907285
CC059/TauUnc f 236.276 87.848808933 411.2420665417 61.3099334583
CC063/Unc f 129.7266666667 113.4123246605 355.6068872892 -96.1535539558
CC071/TauUnc f 369.6 98.2179542583 565.2180092715 173.9819907285




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA