Project measure / variable:   Bennett4   X_night_HFHS

ID, description, units MPD:114868   X_night_HFHS   activity on x-axis total (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis total (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1361.0   n
Median of the strain means1162.0   n
SD of the strain means± 671.9
Coefficient of variation (CV)0.4935
Min–max range of strain means798.1   –   3724.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 40828574.8597 1944217.8505 1.8624 0.0264
Residuals 76 79337735.4302 1043917.5714


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 888.7 85.49   5 38.231 0.0962 815.2, 1021.0 -0.7
CC002/Unc f 798.1 243.6   5 108.9 0.3052 468.9, 1054.0 -0.84
CC004/TauUnc f 2494.0 963.9   5 431.1 0.3865 1451.0, 3561.0 1.69
CC006/TauUnc f 1364.0 789.6   4 394.8 0.5789 223.2, 2044.0 0.0
CC008/GeniUnc f 912.3 255.7   4 127.8 0.2802 562.8, 1142.0 -0.67
CC011/Unc f 1138.0 314.0   5 140.4 0.276 633.0, 1428.0 -0.33
CC012/GeniUnc f 833.8 220.3   4 110.2 0.2642 659.2, 1147.0 -0.79
CC019/TauUnc f 1033.0 84.52   5 37.799 0.0818 940.1, 1148.0 -0.49
CC024/GeniUnc f 1676.0 54.45   2   38.5 0.0325 1638.0, 1715.0 0.47
CC027/GeniUnc f 2075.0 464.6   5 207.8 0.2239 1448.0, 2627.0 1.06
CC028/GeniUnc f 949.6 358.6   4 179.3 0.3777 594.4, 1440.0 -0.61
CC030/GeniUnc f 1129.0 174.8   5 78.19 0.1548 947.4, 1407.0 -0.35
CC032/GeniUnc f 1232.0 418.7   5 187.2 0.3398 876.2, 1913.0 -0.19
CC035/Unc f 963.2 343.7   5 153.7 0.3568 517.5, 1472.0 -0.59
CC036/Unc f 1520.0 328.5   5 146.9 0.2162 1153.0, 1927.0 0.24
CC037/TauUnc f 1187.0 642.3   5 287.2 0.541 351.4, 1840.0 -0.26
CC040/TauUnc f 1351.0 304.2   4 152.1 0.2251 922.1, 1618.0 -0.02
CC041/TauUnc f 901.4 417.0   5 186.5 0.4626 425.9, 1387.0 -0.68
CC045/GeniUnc f 3724.0 4679.0   4 2339.0 1.2562 1240.0, 10740.0 3.52
CC059/TauUnc f 983.4 451.9   5 202.1 0.4595 317.4, 1336.0 -0.56
CC063/Unc f 1305.0 449.9   3 259.8 0.3448 853.2, 1753.0 -0.08
CC071/TauUnc f 1494.0 270.1   4 135.1 0.1808 1151.0, 1811.0 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 888.7 456.9283469975 1798.7516732852 -21.3516732852
CC002/Unc f 798.12 456.9283469975 1708.1716732852 -111.9316732852
CC004/TauUnc f 2494.2 456.9283469975 3404.2516732852 1584.1483267148
CC006/TauUnc f 1364.05 510.8614223666 2381.5187022516 346.5812977484
CC008/GeniUnc f 912.35 510.8614223666 1929.8187022516 -105.1187022516
CC011/Unc f 1137.8 456.9283469975 2047.8516732852 227.7483267148
CC012/GeniUnc f 833.8 510.8614223666 1851.2687022516 -183.6687022516
CC019/TauUnc f 1033.2 456.9283469975 1943.2516732852 123.1483267148
CC024/GeniUnc f 1676.5 722.467152004 3115.4180380144 237.5819619856
CC027/GeniUnc f 2075.2 456.9283469975 2985.2516732852 1165.1483267148
CC028/GeniUnc f 949.6 510.8614223666 1967.0687022516 -67.8687022516
CC030/GeniUnc f 1129.28 456.9283469975 2039.3316732852 219.2283267148
CC032/GeniUnc f 1232.16 456.9283469975 2142.2116732852 322.1083267148
CC035/Unc f 963.22 456.9283469975 1873.2716732852 53.1683267148
CC036/Unc f 1519.8 456.9283469975 2429.8516732852 609.7483267148
CC037/TauUnc f 1187.26 456.9283469975 2097.3116732852 277.2083267148
CC040/TauUnc f 1351.275 510.8614223666 2368.7437022516 333.8062977484
CC041/TauUnc f 901.4 456.9283469975 1811.4516732852 -8.6516732852
CC045/GeniUnc f 3724.5 510.8614223666 4741.9687022516 2707.0312977484
CC059/TauUnc f 983.42 456.9283469975 1893.4716732852 73.3683267148
CC063/Unc f 1304.7333333333 589.8919594439 2479.6049916073 129.8616750594
CC071/TauUnc f 1494.5 510.8614223666 2511.9687022516 477.0312977484




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA