Project measure / variable:   Bennett4   X_night_HP

ID, description, units MPD:114867   X_night_HP   activity on x-axis total (beam breaks), night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis total (beam breaks), night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1430.0   n
Median of the strain means1196.0   n
SD of the strain means± 860.5
Coefficient of variation (CV)0.6017
Min–max range of strain means748.6   –   4969.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 77123540.94 3672549.5686 21.0299 < 0.0001
Residuals 78 13621515.6075 174634.8155


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1099.0 167.4   5 74.85 0.1523 915.4, 1361.0 -0.38
CC002/Unc f 849.5 179.9   5 80.47 0.2118 669.9, 1069.0 -0.67
CC004/TauUnc f 4969.0 1314.0   5 587.8 0.2645 3652.0, 6584.0 4.11
CC006/TauUnc f 1988.0 182.1   4 91.05 0.0916 1718.0, 2097.0 0.65
CC008/GeniUnc f 1296.0 288.4   4 144.2 0.2225 930.2, 1597.0 -0.16
CC011/Unc f 1156.0 433.7   5 194.0 0.375 668.9, 1802.0 -0.32
CC012/GeniUnc f 748.6 29.88   5 13.363 0.0399 702.6, 779.6 -0.79
CC019/TauUnc f 1201.0 89.47   5 40.011 0.0745 1087.0, 1312.0 -0.27
CC024/GeniUnc f 1268.0 312.5   2   221.0 0.2465 1047.0, 1489.0 -0.19
CC027/GeniUnc f 2063.0 593.2   5 265.3 0.2876 1747.0, 3122.0 0.74
CC028/GeniUnc f 1071.0 119.6   4 59.78 0.1117 963.2, 1190.0 -0.42
CC030/GeniUnc f 779.5 542.8   5 242.8 0.6964 103.0, 1378.0 -0.76
CC032/GeniUnc f 1116.0 109.5   5 48.989 0.0982 989.6, 1234.0 -0.36
CC035/Unc f 1120.0 360.7   5 161.3 0.3219 659.1, 1511.0 -0.36
CC036/Unc f 1605.0 342.7   4 171.3 0.2136 1096.0, 1836.0 0.2
CC037/TauUnc f 1180.0 145.9   5 65.26 0.1236 1006.0, 1349.0 -0.29
CC040/TauUnc f 1439.0 315.8   5 141.2 0.2195 1079.0, 1943.0 0.01
CC041/TauUnc f 941.9 349.7   5 156.4 0.3713 587.1, 1386.0 -0.57
CC045/GeniUnc f 1638.0 207.3   4 103.7 0.1265 1416.0, 1823.0 0.24
CC059/TauUnc f 1190.0 206.6   5 92.41 0.1737 854.2, 1387.0 -0.28
CC063/Unc f 1520.0 197.2   3 113.9 0.1298 1298.0, 1675.0 0.1
CC071/TauUnc f 1223.0 289.2   5 129.3 0.2364 793.8, 1463.0 -0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1099.28 186.8875680621 1471.3445670737 727.2154329263
CC002/Unc f 849.48 186.8875680621 1221.5445670737 477.4154329263
CC004/TauUnc f 4969.2 186.8875680621 5341.2645670737 4597.1354329263
CC006/TauUnc f 1988.25 208.9466531682 2404.2308319979 1572.2691680021
CC008/GeniUnc f 1296.3 208.9466531682 1712.2808319979 880.3191680021
CC011/Unc f 1156.4 186.8875680621 1528.4645670737 784.3354329263
CC012/GeniUnc f 748.56 186.8875680621 1120.6245670737 376.4954329263
CC019/TauUnc f 1201.4 186.8875680621 1573.4645670737 829.3354329263
CC024/GeniUnc f 1268.0 295.4951907229 1856.2857342987 679.7142657013
CC027/GeniUnc f 2062.8 186.8875680621 2434.8645670737 1690.7354329263
CC028/GeniUnc f 1070.675 208.9466531682 1486.6558319979 654.6941680021
CC030/GeniUnc f 779.46 186.8875680621 1151.5245670737 407.3954329263
CC032/GeniUnc f 1115.52 186.8875680621 1487.5845670737 743.4554329263
CC035/Unc f 1120.5 186.8875680621 1492.5645670737 748.4354329263
CC036/Unc f 1604.75 208.9466531682 2020.7308319979 1188.7691680021
CC037/TauUnc f 1180.4 186.8875680621 1552.4645670737 808.3354329263
CC040/TauUnc f 1438.6 186.8875680621 1810.6645670737 1066.5354329263
CC041/TauUnc f 941.92 186.8875680621 1313.9845670737 569.8554329263
CC045/GeniUnc f 1638.5 208.9466531682 2054.4808319979 1222.5191680021
CC059/TauUnc f 1189.64 186.8875680621 1561.7045670737 817.5754329263
CC063/Unc f 1520.0 241.2708129059 2000.3332906635 1039.6667093365
CC071/TauUnc f 1223.16 186.8875680621 1595.2245670737 851.0954329263




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA