Project measure / variable:   Bennett4   X_day_HP

ID, description, units MPD:114865   X_day_HP   activity on x-axis total (beam breaks), day   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis total (beam breaks), day HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means617.7   n
Median of the strain means533.4   n
SD of the strain means± 235.0
Coefficient of variation (CV)0.3804
Min–max range of strain means274.9   –   1213.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 5320228.2385 253344.2018 4.2246 < 0.0001
Residuals 78 4677549.9085 59968.5886


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 501.6 101.2   5 45.252 0.2017 376.5, 657.9 -0.49
CC002/Unc f 603.4 109.4   5 48.914 0.1813 479.5, 779.8 -0.06
CC004/TauUnc f 1213.0 679.2   5 303.7 0.5597 629.5, 2056.0 2.53
CC006/TauUnc f 782.1 188.7   4 94.37 0.2413 617.6, 1028.0 0.7
CC008/GeniUnc f 794.5 79.76   4 39.879 0.1004 701.5, 894.4 0.75
CC011/Unc f 624.4 351.6   5 157.2 0.563 87.06, 1050.0 0.03
CC012/GeniUnc f 471.3 54.62   5 24.429 0.1159 407.6, 552.2 -0.62
CC019/TauUnc f 444.2 52.22   5 23.356 0.1176 384.9, 505.9 -0.74
CC024/GeniUnc f 382.5 108.5   2   76.7 0.2836 305.8, 459.2 -1.0
CC027/GeniUnc f 907.5 361.3   5 161.6 0.3982 625.3, 1538.0 1.23
CC028/GeniUnc f 556.1 118.3   4 59.15 0.2127 426.8, 708.1 -0.26
CC030/GeniUnc f 274.9 260.3   5 116.4 0.9468 -1.46
CC032/GeniUnc f 905.1 244.1   5 109.2 0.2697 619.6, 1165.0 1.22
CC035/Unc f 513.6 183.5   5 82.05 0.3572 350.8, 762.9 -0.44
CC036/Unc f 578.9 121.7   4 60.86 0.2103 449.2, 728.8 -0.17
CC037/TauUnc f 528.0 233.3   5 104.3 0.4418 384.9, 929.0 -0.38
CC040/TauUnc f 520.1 152.8   5 68.33 0.2937 377.0, 773.8 -0.42
CC041/TauUnc f 366.7 112.5   5 50.32 0.3069 279.3, 560.8 -1.07
CC045/GeniUnc f 1078.0 273.7   4 136.9 0.254 826.6, 1465.0 1.96
CC059/TauUnc f 538.7 89.76   5 40.143 0.1666 398.4, 648.9 -0.34
CC063/Unc f 478.7 104.2   3 60.16 0.2177 363.4, 566.1 -0.59
CC071/TauUnc f 526.8 221.1   5 98.88 0.4197 290.6, 877.9 -0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 501.64 109.5158331668 719.6692754486 283.6107245514
CC002/Unc f 603.42 109.5158331668 821.4492754486 385.3907245514
CC004/TauUnc f 1213.46 109.5158331668 1431.4892754486 995.4307245514
CC006/TauUnc f 782.1 122.4424237868 1025.8641404941 538.3358595059
CC008/GeniUnc f 794.525 122.4424237868 1038.2891404941 550.7608595059
CC011/Unc f 624.412 109.5158331668 842.4412754486 406.3827245514
CC012/GeniUnc f 471.28 109.5158331668 689.3092754486 253.2507245514
CC019/TauUnc f 444.18 109.5158331668 662.2092754486 226.1507245514
CC024/GeniUnc f 382.5 173.1597363291 727.2345535069 37.7654464931
CC027/GeniUnc f 907.46 109.5158331668 1125.4892754486 689.4307245514
CC028/GeniUnc f 556.1 122.4424237868 799.8641404941 312.3358595059
CC030/GeniUnc f 274.88 109.5158331668 492.9092754486 56.8507245514
CC032/GeniUnc f 905.06 109.5158331668 1123.0892754486 687.0307245514
CC035/Unc f 513.58 109.5158331668 731.6092754486 295.5507245514
CC036/Unc f 578.875 122.4424237868 822.6391404941 335.1108595059
CC037/TauUnc f 528.0 109.5158331668 746.0292754486 309.9707245514
CC040/TauUnc f 520.12 109.5158331668 738.1492754486 302.0907245514
CC041/TauUnc f 366.66 109.5158331668 584.6892754486 148.6307245514
CC045/GeniUnc f 1077.9 122.4424237868 1321.6641404941 834.1358595059
CC059/TauUnc f 538.66 109.5158331668 756.6892754486 320.6307245514
CC063/Unc f 478.7333333333 141.384332667 760.2079175994 197.2587490673
CC071/TauUnc f 526.84 109.5158331668 744.8692754486 308.8107245514




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA