Project measure / variable:   Bennett4   XY_ave_HFHS

ID, description, units MPD:114864   XY_ave_HFHS   activity on x-axis plus y-axis (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1932.0   n
Median of the strain means1734.0   n
SD of the strain means± 782.8
Coefficient of variation (CV)0.4053
Min–max range of strain means1210.0   –   4506.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 56400264.4978 2685726.8808 2.19 0.0071
Residuals 76 93205068.2942 1226382.4776


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1388.0 242.9   5 108.6 0.175 1083.0, 1687.0 -0.69
CC002/Unc f 1493.0 205.7   5 91.97 0.1378 1156.0, 1716.0 -0.56
CC004/TauUnc f 3345.0 1265.0   5 565.9 0.3783 2352.0, 5454.0 1.81
CC006/TauUnc f 1851.0 543.2   4 271.6 0.2935 1070.0, 2312.0 -0.1
CC008/GeniUnc f 1550.0 489.2   4 244.6 0.3156 934.9, 1996.0 -0.49
CC011/Unc f 2047.0 619.5   5 277.0 0.3027 1269.0, 2921.0 0.15
CC012/GeniUnc f 1250.0 216.6   4 108.3 0.1732 1055.0, 1551.0 -0.87
CC019/TauUnc f 1497.0 173.9   5 77.78 0.1162 1198.0, 1630.0 -0.56
CC024/GeniUnc f 2224.0 123.0   2   87.0 0.0553 2137.0, 2311.0 0.37
CC027/GeniUnc f 3015.0 426.4   5 190.7 0.1414 2534.0, 3584.0 1.38
CC028/GeniUnc f 1399.0 339.7   4 169.8 0.2428 964.2, 1771.0 -0.68
CC030/GeniUnc f 1464.0 229.3   5 102.6 0.1567 1212.0, 1824.0 -0.6
CC032/GeniUnc f 1896.0 294.9   5 131.9 0.1556 1474.0, 2284.0 -0.05
CC035/Unc f 1490.0 415.6   5 185.9 0.2789 1077.0, 2168.0 -0.56
CC036/Unc f 1946.0 442.3   5 197.8 0.2273 1291.0, 2470.0 0.02
CC037/TauUnc f 1720.0 716.7   5 320.5 0.4168 774.5, 2400.0 -0.27
CC040/TauUnc f 1939.0 464.5   4 232.2 0.2395 1267.0, 2302.0 0.01
CC041/TauUnc f 1210.0 551.2   5 246.5 0.4557 499.9, 1852.0 -0.92
CC045/GeniUnc f 4506.0 4959.0   4 2479.0 1.1005 1871.0, 11942.0 3.29
CC059/TauUnc f 1360.0 601.9   5 269.2 0.4426 499.9, 1868.0 -0.73
CC063/Unc f 1747.0 470.4   3 271.6 0.2693 1306.0, 2242.0 -0.24
CC071/TauUnc f 2157.0 314.9   4 157.5 0.146 1751.0, 2504.0 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1388.2 495.253970717 2374.5837682948 401.8162317052
CC002/Unc f 1492.6 495.253970717 2478.9837682948 506.2162317052
CC004/TauUnc f 3345.0 495.253970717 4331.3837682948 2358.6162317052
CC006/TauUnc f 1850.75 553.710772325 2953.5605789048 747.9394210952
CC008/GeniUnc f 1549.975 553.710772325 2652.7855789048 447.1644210952
CC011/Unc f 2046.8 495.253970717 3033.1837682948 1060.4162317052
CC012/GeniUnc f 1250.5 553.710772325 2353.3105789048 147.6894210952
CC019/TauUnc f 1496.6 495.253970717 2482.9837682948 510.2162317052
CC024/GeniUnc f 2224.0 783.065283854 3783.6096774157 664.3903225843
CC027/GeniUnc f 3014.6 495.253970717 4000.9837682948 2028.2162317052
CC028/GeniUnc f 1399.05 553.710772325 2501.8605789048 296.2394210952
CC030/GeniUnc f 1463.8 495.253970717 2450.1837682948 477.4162317052
CC032/GeniUnc f 1895.6 495.253970717 2881.9837682948 909.2162317052
CC035/Unc f 1490.2 495.253970717 2476.5837682948 503.8162317052
CC036/Unc f 1945.8 495.253970717 2932.1837682948 959.4162317052
CC037/TauUnc f 1719.5 495.253970717 2705.8837682948 733.1162317052
CC040/TauUnc f 1939.25 553.710772325 3042.0605789048 836.4394210952
CC041/TauUnc f 1209.56 495.253970717 2195.9437682948 223.1762317052
CC045/GeniUnc f 4505.75 553.710772325 5608.5605789048 3402.9394210952
CC059/TauUnc f 1359.82 495.253970717 2346.2037682948 373.4362317052
CC063/Unc f 1746.6666666667 639.37012691 3020.0826358584 473.2506974749
CC071/TauUnc f 2157.0 553.710772325 3259.8105789048 1054.1894210952




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA