Project measure / variable:   Bennett4   XY_ave_HP

ID, description, units MPD:114863   XY_ave_HP   activity on x-axis plus y-axis (beam breaks), average for day and night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis (beam breaks), average for day and night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1987.0   n
Median of the strain means1684.0   n
SD of the strain means± 1058.0
Coefficient of variation (CV)0.5324
Min–max range of strain means988.7   –   6263.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 116119760.9805 5529512.4276 16.7449 < 0.0001
Residuals 78 25757286.6278 330221.6234


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1599.0 169.5   5 75.79 0.106 1439.0, 1886.0 -0.37
CC002/Unc f 1401.0 240.8   5 107.7 0.1718 1213.0, 1697.0 -0.55
CC004/TauUnc f 6263.0 1880.0   5 841.0 0.3003 4138.0, 9188.0 4.04
CC006/TauUnc f 2650.0 120.7   4 60.33 0.0455 2547.0, 2822.0 0.63
CC008/GeniUnc f 2059.0 440.8   4 220.4 0.2141 1481.0, 2553.0 0.07
CC011/Unc f 1763.0 778.8   5 348.3 0.4418 731.0, 2843.0 -0.21
CC012/GeniUnc f 1144.0 61.95   5 27.705 0.0542 1047.0, 1217.0 -0.8
CC019/TauUnc f 1619.0 150.6   5 67.35 0.093 1418.0, 1792.0 -0.35
CC024/GeniUnc f 1641.0 173.9   2   123.0 0.106 1518.0, 1764.0 -0.33
CC027/GeniUnc f 2845.0 534.7   5 239.1 0.1879 2444.0, 3640.0 0.81
CC028/GeniUnc f 1526.0 154.0   4 77.01 0.1009 1345.0, 1682.0 -0.44
CC030/GeniUnc f 988.7 665.3   5 297.5 0.6729 98.38, 1762.0 -0.94
CC032/GeniUnc f 1949.0 285.4   5 127.7 0.1465 1618.0, 2358.0 -0.04
CC035/Unc f 1609.0 465.0   5 208.0 0.289 1068.0, 2027.0 -0.36
CC036/Unc f 2039.0 363.3   4 181.7 0.1782 1506.0, 2323.0 0.05
CC037/TauUnc f 1656.0 307.1   5 137.4 0.1855 1348.0, 2150.0 -0.31
CC040/TauUnc f 1868.0 340.8   5 152.4 0.1825 1409.0, 2288.0 -0.11
CC041/TauUnc f 1292.0 405.9   5 181.5 0.3142 878.4, 1713.0 -0.66
CC045/GeniUnc f 2561.0 491.4   4 245.7 0.1919 2010.0, 3113.0 0.54
CC059/TauUnc f 1601.0 264.8   5 118.4 0.1654 1150.0, 1846.0 -0.36
CC063/Unc f 1925.0 189.1   3 109.2 0.0982 1718.0, 2089.0 -0.06
CC071/TauUnc f 1712.0 481.5   5 215.3 0.2813 937.2, 2213.0 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1599.2 256.9909038986 2110.8295877378 1087.5704122621
CC002/Unc f 1401.2 256.9909038986 1912.8295877378 889.5704122622
CC004/TauUnc f 6262.8 256.9909038986 6774.4295877379 5751.1704122622
CC006/TauUnc f 2650.0 287.3245653582 3222.019268741 2077.980731259
CC008/GeniUnc f 2059.25 287.3245653582 2631.269268741 1487.230731259
CC011/Unc f 1762.8 256.9909038986 2274.4295877378 1251.1704122622
CC012/GeniUnc f 1143.6 256.9909038986 1655.2295877378 631.9704122621
CC019/TauUnc f 1618.8 256.9909038986 2130.4295877378 1107.1704122622
CC024/GeniUnc f 1641.0 406.3382971326 2449.9574077923 832.0425922077
CC027/GeniUnc f 2845.0 256.9909038986 3356.6295877378 2333.3704122622
CC028/GeniUnc f 1525.75 287.3245653582 2097.769268741 953.730731259
CC030/GeniUnc f 988.716 256.9909038986 1500.3455877378 477.0864122622
CC032/GeniUnc f 1948.8 256.9909038986 2460.4295877378 1437.1704122622
CC035/Unc f 1609.0 256.9909038986 2120.6295877378 1097.3704122622
CC036/Unc f 2039.25 287.3245653582 2611.269268741 1467.230731259
CC037/TauUnc f 1655.6 256.9909038986 2167.2295877378 1143.9704122622
CC040/TauUnc f 1867.6 256.9909038986 2379.2295877378 1355.9704122622
CC041/TauUnc f 1291.82 256.9909038986 1803.4495877378 780.1904122622
CC045/GeniUnc f 2560.75 287.3245653582 3132.769268741 1988.730731259
CC059/TauUnc f 1601.2 256.9909038986 2112.8295877378 1089.5704122622
CC063/Unc f 1924.6666666667 331.7738303087 2585.1776242452 1264.1557090881
CC071/TauUnc f 1711.64 256.9909038986 2223.2695877378 1200.0104122622




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA