Project measure / variable:   Bennett4   XY_night_HP

ID, description, units MPD:114861   XY_night_HP   activity on x-axis plus y-axis (beam breaks), night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis (beam breaks), night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means2789.0   n
Median of the strain means2342.0   n
SD of the strain means± 1750.0
Coefficient of variation (CV)0.6275
Min–max range of strain means1433.0   –   10064.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 319253625.3208 15202553.5867 19.7884 < 0.0001
Residuals 78 59923880.8467 768254.8826


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 2213.0 333.5   5 149.2 0.1507 1862.0, 2721.0 -0.33
CC002/Unc f 1658.0 331.1   5 148.1 0.1997 1378.0, 2046.0 -0.65
CC004/TauUnc f 10064.0 2966.0   5 1326.0 0.2947 6946.0, 13995.0 4.16
CC006/TauUnc f 3863.0 321.5   4 160.7 0.0832 3383.0, 4063.0 0.61
CC008/GeniUnc f 2559.0 652.0   4 326.0 0.2548 1695.0, 3252.0 -0.13
CC011/Unc f 2294.0 888.7   5 397.4 0.3875 1292.0, 3635.0 -0.28
CC012/GeniUnc f 1433.0 55.16   5 24.667 0.0385 1373.0, 1497.0 -0.77
CC019/TauUnc f 2346.0 205.3   5 91.83 0.0875 2040.0, 2563.0 -0.25
CC024/GeniUnc f 2472.0 613.8   2   434.0 0.2483 2038.0, 2906.0 -0.18
CC027/GeniUnc f 3977.0 989.8   5 442.7 0.2489 3430.0, 5739.0 0.68
CC028/GeniUnc f 2019.0 189.1   4 94.57 0.0937 1856.0, 2224.0 -0.44
CC030/GeniUnc f 1463.0 993.6   5 444.3 0.6793 196.8, 2617.0 -0.76
CC032/GeniUnc f 2181.0 220.0   5 98.4 0.1009 1885.0, 2447.0 -0.35
CC035/Unc f 2220.0 705.5   5 315.5 0.3179 1371.0, 3000.0 -0.33
CC036/Unc f 3011.0 688.5   4 344.2 0.2287 2011.0, 3510.0 0.13
CC037/TauUnc f 2337.0 282.6   5 126.4 0.1209 1977.0, 2672.0 -0.26
CC040/TauUnc f 2783.0 637.0   5 284.9 0.2289 2025.0, 3747.0 0.0
CC041/TauUnc f 1866.0 664.1   5 297.0 0.3559 1114.0, 2654.0 -0.53
CC045/GeniUnc f 3122.0 542.4   4 271.2 0.1737 2518.0, 3653.0 0.19
CC059/TauUnc f 2199.0 392.4   5 175.5 0.1784 1581.0, 2617.0 -0.34
CC063/Unc f 2880.0 377.6   3 218.0 0.1311 2447.0, 3143.0 0.05
CC071/TauUnc f 2394.0 610.0   5 272.8 0.2549 1405.0, 2895.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 2213.4 391.983388079 2993.77897918 1433.02102082
CC002/Unc f 1658.2 391.983388079 2438.57897918 877.82102082
CC004/TauUnc f 10063.8000000001 391.983388079 10844.1789791801 9283.42102082
CC006/TauUnc f 3863.0 438.2507508977 4735.4902228292 2990.5097771708
CC008/GeniUnc f 2559.0 438.2507508977 3431.4902228292 1686.5097771708
CC011/Unc f 2293.6 391.983388079 3073.97897918 1513.22102082
CC012/GeniUnc f 1433.4 391.983388079 2213.77897918 653.02102082
CC019/TauUnc f 2346.2 391.983388079 3126.57897918 1565.82102082
CC024/GeniUnc f 2472.0 619.7801556397 3705.887506163 1238.112493837
CC027/GeniUnc f 3977.2 391.983388079 4757.57897918 3196.82102082
CC028/GeniUnc f 2018.75 438.2507508977 2891.2402228292 1146.2597771708
CC030/GeniUnc f 1462.7 391.983388079 2243.07897918 682.32102082
CC032/GeniUnc f 2180.6 391.983388079 2960.97897918 1400.22102082
CC035/Unc f 2219.6 391.983388079 2999.97897918 1439.22102082
CC036/Unc f 3010.75 438.2507508977 3883.2402228292 2138.2597771708
CC037/TauUnc f 2336.6 391.983388079 3116.97897918 1556.22102082
CC040/TauUnc f 2783.0 391.983388079 3563.37897918 2002.62102082
CC041/TauUnc f 1866.2 391.983388079 2646.57897918 1085.82102082
CC045/GeniUnc f 3122.0 438.2507508977 3994.4902228292 2249.5097771708
CC059/TauUnc f 2199.0 391.983388079 2979.37897918 1418.62102082
CC063/Unc f 2879.6666666667 506.0483780067 3887.1315966982 1872.2017366352
CC071/TauUnc f 2393.6 391.983388079 3173.97897918 1613.22102082




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA