Project measure / variable:   Bennett4   XY_day_HFHS

ID, description, units MPD:114860   XY_day_HFHS   activity on x-axis plus y-axis (beam breaks), day   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis (beam breaks), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1112.0   n
Median of the strain means1026.0   n
SD of the strain means± 380.5
Coefficient of variation (CV)0.3421
Min–max range of strain means593.5   –   2018.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 13530514.9465 644310.2355 2.9507 0.0003
Residuals 76 16595107.1127 218356.6725


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 1033.0 324.6   5 145.2 0.3142 676.6, 1473.0 -0.21
CC002/Unc f 1187.0 209.7   5 93.8 0.1767 960.8, 1493.0 0.2
CC004/TauUnc f 1494.0 541.3   5 242.1 0.3624 587.0, 1973.0 1.0
CC006/TauUnc f 790.0 185.2   4 92.59 0.2344 579.5, 1031.0 -0.85
CC008/GeniUnc f 1275.0 578.0   4 289.0 0.4532 559.8, 1806.0 0.43
CC011/Unc f 1432.0 432.4   5 193.4 0.3021 982.5, 1998.0 0.84
CC012/GeniUnc f 841.3 46.554   4 23.277 0.0553 780.9, 885.9 -0.71
CC019/TauUnc f 945.2 231.1   5 103.4 0.2445 539.2, 1095.0 -0.44
CC024/GeniUnc f 1134.0 254.9   2   180.2 0.2248 953.5, 1314.0 0.06
CC027/GeniUnc f 1986.0 300.9   5 134.6 0.1515 1521.0, 2329.0 2.3
CC028/GeniUnc f 863.3 246.6   4 123.3 0.2857 498.9, 1022.0 -0.65
CC030/GeniUnc f 737.3 182.5   5 81.61 0.2475 568.1, 1035.0 -0.99
CC032/GeniUnc f 1326.0 487.2   5 217.9 0.3674 877.4, 2140.0 0.56
CC035/Unc f 1018.0 322.0   5 144.0 0.3164 637.3, 1474.0 -0.25
CC036/Unc f 919.6 420.4   5 188.0 0.4572 327.9, 1328.0 -0.51
CC037/TauUnc f 929.5 479.7   5 214.5 0.5161 175.0, 1302.0 -0.48
CC040/TauUnc f 1193.0 436.0   4 218.0 0.3654 565.0, 1567.0 0.21
CC041/TauUnc f 644.8 372.5   5 166.6 0.5777 118.0, 1102.0 -1.23
CC045/GeniUnc f 2018.0 1504.0   4 751.9 0.7451 966.4, 4231.0 2.38
CC059/TauUnc f 793.5 463.6   5 207.3 0.5842 253.7, 1241.0 -0.84
CC063/Unc f 593.5 267.4   3 154.4 0.4506 367.1, 888.5 -1.36
CC071/TauUnc f 1316.0 187.5   4 93.73 0.1425 1159.0, 1588.0 0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 1033.12 208.9768755318 1449.3335190457 616.9064809543
CC002/Unc f 1186.96 208.9768755318 1603.1735190457 770.7464809543
CC004/TauUnc f 1493.6 208.9768755318 1909.8135190457 1077.3864809543
CC006/TauUnc f 790.0 233.6432497073 1255.3408608703 324.6591391297
CC008/GeniUnc f 1275.2 233.6432497073 1740.5408608703 809.8591391297
CC011/Unc f 1431.5 208.9768755318 1847.7135190457 1015.2864809543
CC012/GeniUnc f 841.275 233.6432497073 1306.6158608703 375.9341391297
CC019/TauUnc f 945.24 208.9768755318 1361.4535190457 529.0264809543
CC024/GeniUnc f 1133.75 330.4214524929 1791.8413565692 475.6586434308
CC027/GeniUnc f 1986.4 208.9768755318 2402.6135190457 1570.1864809543
CC028/GeniUnc f 863.325 233.6432497073 1328.6658608703 397.9841391297
CC030/GeniUnc f 737.32 208.9768755318 1153.5335190457 321.1064809543
CC032/GeniUnc f 1326.08 208.9768755318 1742.2935190457 909.8664809543
CC035/Unc f 1017.88 208.9768755318 1434.0935190457 601.6664809543
CC036/Unc f 919.64 208.9768755318 1335.8535190457 503.4264809543
CC037/TauUnc f 929.46 208.9768755318 1345.6735190457 513.2464809543
CC040/TauUnc f 1193.25 233.6432497073 1658.5908608703 727.9091391297
CC041/TauUnc f 644.78 208.9768755318 1060.9935190457 228.5664809543
CC045/GeniUnc f 2018.35 233.6432497073 2483.6908608703 1553.0091391297
CC059/TauUnc f 793.52 208.9768755318 1209.7335190457 377.3064809543
CC063/Unc f 593.4666666667 269.7879862257 1130.7960092435 56.1373240898
CC071/TauUnc f 1315.75 233.6432497073 1781.0908608703 850.4091391297




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA