Project measure / variable:   Bennett4   XY_day_HP

ID, description, units MPD:114859   XY_day_HP   activity on x-axis plus y-axis (beam breaks), day   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis plus y-axis (beam breaks), day HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means1190.0   n
Median of the strain means1022.0   n
SD of the strain means± 456.8
Coefficient of variation (CV)0.3837
Min–max range of strain means514.7   –   2461.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 20473957.6974 974950.3665 4.4094 < 0.0001
Residuals 78 17246278.9037 221106.1398


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 984.8 201.6   5 90.18 0.2048 792.3, 1286.0 -0.45
CC002/Unc f 1147.0 175.6   5 78.51 0.153 980.9, 1422.0 -0.1
CC004/TauUnc f 2461.0 1388.0   5 620.8 0.564 1330.0, 4380.0 2.78
CC006/TauUnc f 1458.0 349.1   4 174.6 0.2395 1166.0, 1896.0 0.59
CC008/GeniUnc f 1560.0 248.8   4 124.4 0.1595 1267.0, 1855.0 0.81
CC011/Unc f 1232.0 694.3   5 310.5 0.5636 170.4, 2051.0 0.09
CC012/GeniUnc f 857.9 127.2   5 56.87 0.1482 715.2, 1062.0 -0.73
CC019/TauUnc f 891.2 102.8   5 45.967 0.1153 794.8, 1021.0 -0.66
CC024/GeniUnc f 809.9 265.0   2   187.3 0.3272 622.5, 997.2 -0.83
CC027/GeniUnc f 1736.0 634.9   5 283.9 0.3658 1190.0, 2828.0 1.19
CC028/GeniUnc f 1038.0 163.1   4 81.54 0.1571 833.8, 1229.0 -0.33
CC030/GeniUnc f 514.7 449.1   5 200.9 0.8727 -1.48
CC032/GeniUnc f 1717.0 431.7   5 193.1 0.2515 1192.0, 2268.0 1.15
CC035/Unc f 1007.0 318.4   5 142.4 0.3162 723.9, 1464.0 -0.4
CC036/Unc f 1088.0 156.3   4 78.14 0.1437 909.2, 1277.0 -0.22
CC037/TauUnc f 974.7 383.3   5 171.4 0.3932 716.8, 1629.0 -0.47
CC040/TauUnc f 968.7 281.0   5 125.7 0.2901 743.9, 1449.0 -0.49
CC041/TauUnc f 729.0 204.8   5 91.59 0.2809 536.9, 1075.0 -1.01
CC045/GeniUnc f 2000.0 519.7   4 259.9 0.2599 1503.0, 2727.0 1.77
CC059/TauUnc f 1009.0 186.6   5 83.43 0.1849 717.8, 1208.0 -0.4
CC063/Unc f 970.2 169.4   3 97.8 0.1746 791.9, 1129.0 -0.48
CC071/TauUnc f 1036.0 445.7   5 199.3 0.4302 469.2, 1680.0 -0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 984.8 210.288439906 1403.4521241919 566.1478758081
CC002/Unc f 1147.18 210.288439906 1565.8321241919 728.5278758081
CC004/TauUnc f 2461.2 210.288439906 2879.8521241919 2042.5478758081
CC006/TauUnc f 1457.5 235.1096232562 1925.5673043089 989.4326956911
CC008/GeniUnc f 1560.0 235.1096232562 2028.0673043089 1091.9326956911
CC011/Unc f 1231.88 210.288439906 1650.5321241919 813.2278758081
CC012/GeniUnc f 857.9 210.288439906 1276.5521241919 439.2478758081
CC019/TauUnc f 891.18 210.288439906 1309.8321241919 472.5278758081
CC024/GeniUnc f 809.85 332.4952178533 1471.7971298571 147.9028701429
CC027/GeniUnc f 1735.6 210.288439906 2154.2521241919 1316.9478758081
CC028/GeniUnc f 1037.95 235.1096232562 1506.0173043089 569.8826956911
CC030/GeniUnc f 514.66 210.288439906 933.3121241919 96.0078758081
CC032/GeniUnc f 1716.6 210.288439906 2135.2521241919 1297.9478758081
CC035/Unc f 1006.84 210.288439906 1425.4921241919 588.1878758081
CC036/Unc f 1087.8 235.1096232562 1555.8673043089 619.7326956911
CC037/TauUnc f 974.72 210.288439906 1393.3721241919 556.0678758081
CC040/TauUnc f 968.66 210.288439906 1387.3121241919 550.0078758081
CC041/TauUnc f 729.0 210.288439906 1147.6521241919 310.3478758081
CC045/GeniUnc f 1999.75 235.1096232562 2467.8173043089 1531.6826956911
CC059/TauUnc f 1008.94 210.288439906 1427.5921241919 590.2878758081
CC063/Unc f 970.1666666667 271.481208552 1510.6442349499 429.6890983834
CC071/TauUnc f 1036.06 210.288439906 1454.7121241919 617.4078758081




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA