Project measure / variable:   Bennett4   RER_day_HFHS

ID, description, units MPD:114836   RER_day_HFHS   respiratory exchange ratio (VCO2/O2), day   [ratio]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - respiratory exchange ratio (VCO2/O2), day HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.7847   ratio
Median of the strain means0.78853   ratio
SD of the strain means± 0.02647
Coefficient of variation (CV)0.0337
Min–max range of strain means0.73569   –   0.8253   ratio
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 0.0646 0.0031 2.1175 0.0095
Residuals 76 0.1104 0.0015


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.75065 0.02231   5 0.00997537 0.0297 0.72765, 0.77818 -1.29
CC002/Unc f 0.81941 0.03916   5 0.01751 0.0478 0.76629, 0.85959 1.31
CC004/TauUnc f 0.80683 0.04921   5 0.02201 0.061 0.75194, 0.85747 0.84
CC006/TauUnc f 0.82109 0.05335   4 0.02668 0.065 0.76359, 0.89176 1.37
CC008/GeniUnc f 0.75896 0.03493   4 0.01746 0.046 0.72265, 0.79282 -0.97
CC011/Unc f 0.78655 0.0408   5 0.01825 0.0519 0.73035, 0.83376 0.07
CC012/GeniUnc f 0.7759 0.01807   4 0.00903575 0.0233 0.75112, 0.79324 -0.33
CC019/TauUnc f 0.80596 0.04576   5 0.02046 0.0568 0.75347, 0.87741 0.8
CC024/GeniUnc f 0.77889 0.0061589   2   0.004355 0.0079 0.77453, 0.78324 -0.22
CC027/GeniUnc f 0.81528 0.03242   5 0.0145 0.0398 0.76971, 0.85417 1.16
CC028/GeniUnc f 0.79279 0.01514   4 0.0075704 0.0191 0.77047, 0.80241 0.31
CC030/GeniUnc f 0.74674 0.02144   5 0.00958632 0.0287 0.72141, 0.76565 -1.43
CC032/GeniUnc f 0.79384 0.05315   5 0.02377 0.067 0.74059, 0.85224 0.35
CC035/Unc f 0.76637 0.03731   5 0.01668 0.0487 0.72559, 0.81453 -0.69
CC036/Unc f 0.80169 0.04085   5 0.01827 0.051 0.76512, 0.86928 0.64
CC037/TauUnc f 0.76115 0.03173   5 0.01419 0.0417 0.72253, 0.78612 -0.89
CC040/TauUnc f 0.80158 0.0356   4 0.0178 0.0444 0.75729, 0.83112 0.64
CC041/TauUnc f 0.7502 0.03216   5 0.01438 0.0429 0.71912, 0.80341 -1.3
CC045/GeniUnc f 0.79051 0.063   4 0.0315 0.0797 0.74176, 0.88288 0.22
CC059/TauUnc f 0.77796 0.03228   5 0.01444 0.0415 0.75741, 0.83376 -0.25
CC063/Unc f 0.73569 0.00200043   3 0.00115495 0.0027 0.73412, 0.73794 -1.85
CC071/TauUnc f 0.8253 0.04461   4 0.0223 0.0541 0.77718, 0.88018 1.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.750648 0.0170413006 0.7845886917 0.7167073083
CC002/Unc f 0.819408 0.0170413006 0.8533486917 0.7854673083
CC004/TauUnc f 0.806834 0.0170413006 0.8407746917 0.7728933083
CC006/TauUnc f 0.8210925 0.0190527533 0.8590393469 0.7831456531
CC008/GeniUnc f 0.758955 0.0190527533 0.7969018469 0.7210081531
CC011/Unc f 0.78655 0.0170413006 0.8204906917 0.7526093083
CC012/GeniUnc f 0.7758975 0.0190527533 0.8138443469 0.7379506531
CC019/TauUnc f 0.805964 0.0170413006 0.8399046917 0.7720233083
CC024/GeniUnc f 0.778885 0.0269446622 0.8325499456 0.7252200544
CC027/GeniUnc f 0.815282 0.0170413006 0.8492226917 0.7813413083
CC028/GeniUnc f 0.79279 0.0190527533 0.8307368469 0.7548431531
CC030/GeniUnc f 0.746742 0.0170413006 0.7806826917 0.7128013083
CC032/GeniUnc f 0.793836 0.0170413006 0.8277766917 0.7598953083
CC035/Unc f 0.766372 0.0170413006 0.8003126917 0.7324313083
CC036/Unc f 0.801694 0.0170413006 0.8356346917 0.7677533083
CC037/TauUnc f 0.761154 0.0170413006 0.7950946917 0.7272133083
CC040/TauUnc f 0.80158 0.0190527533 0.8395268469 0.7636331531
CC041/TauUnc f 0.750196 0.0170413006 0.7841366917 0.7162553083
CC045/GeniUnc f 0.7905125 0.0190527533 0.8284593469 0.7525656531
CC059/TauUnc f 0.77796 0.0170413006 0.8119006917 0.7440193083
CC063/Unc f 0.7356866667 0.0220002245 0.7795039113 0.6918694221
CC071/TauUnc f 0.825305 0.0190527533 0.8632518469 0.7873581531




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA