Project measure / variable:   Bennett4   health_base_HFHS

ID, description, units MPD:114796   health_base_HFHS   metabolic health score, baseline   [score]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - metabolic health score, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means-0.16837   score
Median of the strain means-0.36248   score
SD of the strain means± 1.5873
Coefficient of variation (CV)-9.4273
Min–max range of strain means-2.367   –   3.2736   score
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 256.0606 12.1934 2.4382 0.0024
Residuals 79 395.0802 5.001


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f -2.367 1.6397   5 0.7333 -0.6927 -4.2486, 0.24884 -1.39
CC002/Unc f -0.57117 2.2623   5 1.0117 -3.9607 -2.6867, 2.9523 -0.25
CC004/TauUnc f -0.1102 1.0346   5 0.46268 -9.3882 -0.93325, 1.4989 0.04
CC006/TauUnc f -1.8095 1.6328   4 0.81641 -0.9023 -4.1979, -0.57427 -1.03
CC008/GeniUnc f 0.05733 0.90557   4 0.45279 15.7958 -0.95092, 0.9237 0.14
CC011/Unc f 0.15136 1.5611   5 0.69815 10.3142 -2.575, 1.2209 0.2
CC012/GeniUnc f 1.8364 1.1666   5 0.5217 0.6353 0.22237, 3.3138 1.26
CC019/TauUnc f 3.2736 1.6528   5 0.73915 0.5049 1.7055, 5.8537 2.17
CC024/GeniUnc f -0.78624 0.9097   2   0.64325 -1.157 -1.4295, -0.14299 -0.39
CC027/GeniUnc f 0.31976 2.2584   5 1.01 7.0628 -1.8436, 3.6936 0.31
CC028/GeniUnc f -1.2767 1.5088   4 0.75438 -1.1817 -2.6944, 0.81304 -0.7
CC030/GeniUnc f -1.9467 1.2249   5 0.54777 -0.6292 -3.5409, -0.3119 -1.12
CC032/GeniUnc f 1.7694 2.1836   5 0.97654 1.2341 -2.0064, 3.3581 1.22
CC035/Unc f -0.85891 2.6525   5 1.1862 -3.0882 -5.026, 1.6332 -0.44
CC036/Unc f -1.5158 3.1967   5 1.4296 -2.109 -6.7179, 1.572 -0.85
CC037/TauUnc f 2.2689 1.4925   5 0.66747 0.6578 0.67547, 4.1612 1.54
CC040/TauUnc f 1.106 4.9984   5 2.2353 4.5193 -5.0796, 8.2953 0.8
CC041/TauUnc f -2.1491 1.929   5 0.86265 -0.8976 -4.9281, -0.38372 -1.25
CC045/GeniUnc f -1.9007 2.779   4 1.3895 -1.4621 -4.0063, 2.1925 -1.09
CC059/TauUnc f -0.70602 1.7025   5 0.76137 -2.4113 -2.8536, 1.6571 -0.34
CC063/Unc f -0.1538 2.7444   3 1.5845 -17.844 -3.198, 2.1308 0.01
CC071/TauUnc f 1.6649 2.612   5 1.1681 1.5689 -1.7303, 5.1672 1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f -2.367032 1.000101451 -0.3763798565 -4.3576841435
CC002/Unc f -0.571174 1.000101451 1.4194781435 -2.5618261435
CC004/TauUnc f -0.1102 1.000101451 1.8804521435 -2.1008521435
CC006/TauUnc f -1.8095425 1.1181474145 0.4160742562 -4.0351592562
CC008/GeniUnc f 0.05733 1.1181474145 2.2829467562 -2.1682867562
CC011/Unc f 0.151356 1.000101451 2.1420081435 -1.8392961435
CC012/GeniUnc f 1.836374 1.000101451 3.8270261435 -0.1542781435
CC019/TauUnc f 3.2736 1.000101451 5.2642521435 1.2829478565
CC024/GeniUnc f -0.786245 1.5812992382 2.3612524012 -3.9337424012
CC027/GeniUnc f 0.319756 1.000101451 2.3104081435 -1.6708961435
CC028/GeniUnc f -1.27674 1.1181474145 0.9488767562 -3.5023567562
CC030/GeniUnc f -1.94668 1.000101451 0.0439721435 -3.9373321435
CC032/GeniUnc f 1.7694 1.000101451 3.7600521435 -0.2212521435
CC035/Unc f -0.858914 1.000101451 1.1317381435 -2.8495661435
CC036/Unc f -1.51576 1.000101451 0.4748921435 -3.5064121435
CC037/TauUnc f 2.268874 1.000101451 4.2595261435 0.2782218565
CC040/TauUnc f 1.106 1.000101451 3.0966521435 -0.8846521435
CC041/TauUnc f -2.149084 1.000101451 -0.1584318565 -4.1397361435
CC045/GeniUnc f -1.9007 1.1181474145 0.3249167562 -4.1263167562
CC059/TauUnc f -0.706024 1.000101451 1.2846281435 -2.6966761435
CC063/Unc f -0.1538 1.2911254215 2.4161208666 -2.7237208666
CC071/TauUnc f 1.664904 1.000101451 3.6555561435 -0.3257481435




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA