Project measure / variable:   Bennett4   CARN_post_HFHS

ID, description, units MPD:114784   CARN_post_HFHS   plasma carnitine amount, post-diet   [µM]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma carnitine amount, post-diet HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means19.281   µM
Median of the strain means18.21   µM
SD of the strain means± 3.5616
Coefficient of variation (CV)0.1847
Min–max range of strain means14.42   –   25.7   µM
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1105.0758 52.6227 2.9822 0.0003
Residuals 76 1341.0438 17.6453


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 14.42 1.6022   5 0.71652 0.1111 13.0, 16.5 -1.36
CC002/Unc f 24.44 5.1027   5 2.282 0.2088 18.5, 31.9 1.45
CC004/TauUnc f 24.96 4.3581   5 1.949 0.1746 19.8, 31.9 1.59
CC006/TauUnc f 16.0 4.7756   4 2.3878 0.2985 11.0, 22.5 -0.92
CC008/GeniUnc f 23.3 3.7256   4 1.8628 0.1599 18.4, 26.2 1.13
CC011/Unc f 18.86 5.4427   5 2.4341 0.2886 13.2, 26.5 -0.12
CC012/GeniUnc f 16.62 1.9842   5 0.88736 0.1194 14.1, 19.0 -0.75
CC019/TauUnc f 20.1 4.2872   5 1.9173 0.2133 14.4, 26.0 0.23
CC024/GeniUnc f 25.15 2.6163   2   1.85 0.104 23.3, 27.0 1.65
CC027/GeniUnc f 18.24 3.0411   5 1.36 0.1667 14.0, 22.2 -0.29
CC028/GeniUnc f 25.7 5.8782   4 2.9391 0.2287 21.3, 34.2 1.8
CC030/GeniUnc f 18.08 1.6634   5 0.74391 0.092 15.3, 19.8 -0.34
CC032/GeniUnc f 16.12 6.1218   5 2.7378 0.3798 6.7, 23.7 -0.89
CC035/Unc f 23.02 2.6281   5 1.1753 0.1142 19.5, 26.9 1.05
CC036/Unc f 20.18 2.7417   5 1.2261 0.1359 16.3, 22.8 0.25
CC037/TauUnc f 15.94 2.5725   5 1.1505 0.1614 11.8, 18.6 -0.94
CC040/TauUnc f 16.45 4.5684   4 2.2842 0.2777 12.8, 22.7 -0.79
CC041/TauUnc f 18.64 5.4482   5 2.4365 0.2923 11.2, 26.4 -0.18
CC045/GeniUnc f 17.325 6.8329   4 3.4165 0.3944 10.0, 25.5 -0.55
CC059/TauUnc f 18.18 3.8525   5 1.7229 0.2119 12.9, 23.0 -0.31
CC063/Unc f 17.433 3.2254   3 1.8622 0.185 14.0, 20.4 -0.52
CC071/TauUnc f 15.033 4.3936   3 2.5366 0.2923 10.0, 18.1 -1.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 14.42 1.8785799742 18.1615162796 10.6784837204
CC002/Unc f 24.44 1.8785799742 28.1815162796 20.6984837204
CC004/TauUnc f 24.96 1.8785799742 28.7015162796 21.2184837204
CC006/TauUnc f 16.0 2.1003162617 20.18314237 11.81685763
CC008/GeniUnc f 23.3 2.1003162617 27.48314237 19.11685763
CC011/Unc f 18.86 1.8785799742 22.6015162796 15.1184837204
CC012/GeniUnc f 16.62 1.8785799742 20.3615162796 12.8784837204
CC019/TauUnc f 20.1 1.8785799742 23.8415162796 16.3584837204
CC024/GeniUnc f 25.15 2.9702957426 31.065856673 19.234143327
CC027/GeniUnc f 18.24 1.8785799742 21.9815162796 14.4984837204
CC028/GeniUnc f 25.7 2.1003162617 29.88314237 21.51685763
CC030/GeniUnc f 18.08 1.8785799742 21.8215162796 14.3384837204
CC032/GeniUnc f 16.12 1.8785799742 19.8615162796 12.3784837204
CC035/Unc f 23.02 1.8785799742 26.7615162796 19.2784837204
CC036/Unc f 20.18 1.8785799742 23.9215162796 16.4384837204
CC037/TauUnc f 15.94 1.8785799742 19.6815162796 12.1984837204
CC040/TauUnc f 16.45 2.1003162617 20.63314237 12.26685763
CC041/TauUnc f 18.64 1.8785799742 22.3815162796 14.8984837204
CC045/GeniUnc f 17.325 2.1003162617 21.50814237 13.14185763
CC059/TauUnc f 18.18 1.8785799742 21.9215162796 14.4384837204
CC063/Unc f 17.4333333333 2.4252363181 22.2636100801 12.6030565866
CC071/TauUnc f 15.0333333333 2.4252363181 19.8636100801 10.2030565866




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA