Project measure / variable:   Bennett4   CARN_base_HP

ID, description, units MPD:114781   CARN_base_HP   plasma carnitine amount, baseline   [µM]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma carnitine amount, baseline HP group

CC028/GeniUncCC004/TauUncCC024/GeniUncCC002/UncCC041/TauUncCC035/UncCC040/TauUncCC059/TauUncCC011/UncCC008/GeniUncCC036/UncCC019/TauUncCC045/GeniUncCC071/TauUncCC063/UncCC006/TauUncCC032/GeniUncCC030/GeniUncCC001/UncCC027/GeniUncCC037/TauUncCC012/GeniUnc µM 10152025303540femalemale


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means17.64   µM
Median of the strain means16.49   µM
SD of the strain means± 4.7049
Coefficient of variation (CV)0.2667
Min–max range of strain means12.68   –   32.05   µM
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1992.2715 94.8701 5.6483 < 0.0001
Residuals 79 1326.899 16.7962


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 22 (22)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
CC001/Unc f 13.64 3.1093   5 1.3905 0.228 10.6, 17.8 -0.85
CC002/Unc f 20.6 2.8452   5 1.2724 0.1381 16.6, 24.6 0.63
CC004/TauUnc f 26.24 3.6896   5 1.65 0.1406 21.8, 29.9 1.83
CC006/TauUnc f 14.325 6.1016   4 3.0508 0.4259 10.0, 23.3 -0.7
CC008/GeniUnc f 18.025 2.1438   4 1.0719 0.1189 16.5, 21.2 0.08
CC011/Unc f 18.4 2.9385   5 1.3142 0.1597 15.4, 23.3 0.16
CC012/GeniUnc f 12.68 1.9779   5 0.88453 0.156 10.4, 14.8 -1.05
CC019/TauUnc f 16.44 5.573   5 2.4923 0.339 7.7, 22.1 -0.25
CC024/GeniUnc f 23.0 0.28284   2   0.2 0.0123 22.8, 23.2 1.14
CC027/GeniUnc f 13.04 1.641   5 0.73389 0.1258 10.2, 14.3 -0.98
CC028/GeniUnc f 32.05 7.9985   4 3.9993 0.2496 22.3, 39.5 3.06
CC030/GeniUnc f 14.12 3.7131   5 1.6605 0.263 8.4, 18.1 -0.75
CC032/GeniUnc f 14.14 3.1817   5 1.4229 0.225 10.4, 18.3 -0.74
CC035/Unc f 19.08 4.4791   5 2.0031 0.2348 13.1, 24.1 0.31
CC036/Unc f 16.54 3.1326   5 1.4009 0.1894 14.2, 21.9 -0.23
CC037/TauUnc f 12.88 1.348   5 0.60283 0.1047 11.6, 14.8 -1.01
CC040/TauUnc f 18.66 4.635   5 2.0728 0.2484 13.1, 25.5 0.22
CC041/TauUnc f 19.18 7.997   5 3.5764 0.4169 11.2, 29.4 0.33
CC045/GeniUnc f 16.15 2.1393   4 1.0697 0.1325 13.4, 18.4 -0.32
CC059/TauUnc f 18.62 2.6061   5 1.1655 0.14 14.9, 21.3 0.21
CC063/Unc f 14.4 2.4515   3 1.4154 0.1702 11.9, 16.8 -0.69
CC071/TauUnc f 15.86 4.5181   5 2.0205 0.2849 11.0, 23.1 -0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 13.64 1.8328224067 17.2881417448 9.9918582552
CC002/Unc f 20.6 1.8328224067 24.2481417448 16.9518582552
CC004/TauUnc f 26.24 1.8328224067 29.8881417448 22.5918582552
CC006/TauUnc f 14.325 2.0491577461 18.4037464665 10.2462535335
CC008/GeniUnc f 18.025 2.0491577461 22.1037464665 13.9462535335
CC011/Unc f 18.4 1.8328224067 22.0481417448 14.7518582552
CC012/GeniUnc f 12.68 1.8328224067 16.3281417448 9.0318582552
CC019/TauUnc f 16.44 1.8328224067 20.0881417448 12.7918582552
CC024/GeniUnc f 23.0 2.897946676 28.7682185704 17.2317814296
CC027/GeniUnc f 13.04 1.8328224067 16.6881417448 9.3918582552
CC028/GeniUnc f 32.05 2.0491577461 36.1287464665 27.9712535335
CC030/GeniUnc f 14.12 1.8328224067 17.7681417448 10.4718582552
CC032/GeniUnc f 14.14 1.8328224067 17.7881417448 10.4918582552
CC035/Unc f 19.08 1.8328224067 22.7281417448 15.4318582552
CC036/Unc f 16.54 1.8328224067 20.1881417448 12.8918582552
CC037/TauUnc f 12.88 1.8328224067 16.5281417448 9.2318582552
CC040/TauUnc f 18.66 1.8328224067 22.3081417448 15.0118582552
CC041/TauUnc f 19.18 1.8328224067 22.8281417448 15.5318582552
CC045/GeniUnc f 16.15 2.0491577461 20.2287464665 12.0712535335
CC059/TauUnc f 18.62 1.8328224067 22.2681417448 14.9718582552
CC063/Unc f 14.4 2.3661635526 19.1097307408 9.6902692592
CC071/TauUnc f 15.86 1.8328224067 19.5081417448 12.2118582552




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA