Project measure / variable:   Bennett4   PC_base_HP

ID, description, units MPD:114777   PC_base_HP   plasma phosphocholine amount, baseline   [µM]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma phosphocholine amount, baseline HP group

CC040/TauUncCC011/UncCC004/TauUncCC041/TauUncCC006/TauUncCC008/GeniUncCC002/UncCC035/UncCC028/GeniUncCC027/GeniUncCC059/TauUncCC045/GeniUncCC024/GeniUncCC001/UncCC036/UncCC071/TauUncCC012/GeniUncCC019/TauUncCC030/GeniUncCC037/TauUncCC063/UncCC032/GeniUnc µM 345678910111213femalemale


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means5.8099   µM
Median of the strain means5.79   µM
SD of the strain means± 1.1221
Coefficient of variation (CV)0.1931
Min–max range of strain means4.08   –   7.7667   µM
Mean sample size per strain4.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 109.1267 5.1965 3.0983 0.0002
Residuals 68 114.0512 1.6772


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 22 (22)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
CC001/Unc f 5.36 0.6229   5 0.27857 0.1162 4.6, 6.0 -0.4
CC002/Unc f 6.22 1.2112   5 0.54166 0.1947 4.9, 7.6 0.37
CC004/TauUnc f 7.6 1.5875   4 0.79373 0.2089 5.5, 9.3 1.6
CC006/TauUnc f 6.875 2.7512   4 1.3756 0.4002 4.4, 10.8 0.95
CC008/GeniUnc f 6.7333 0.87369   3 0.50442 0.1298 6.0, 7.7 0.82
CC011/Unc f 7.66 1.0597   5 0.47392 0.1383 6.1, 8.7 1.65
CC012/GeniUnc f 4.86 0.92358   5 0.41304 0.19 3.8, 5.6 -0.85
CC019/TauUnc f 4.78 0.88713   5 0.39674 0.1856 4.1, 5.8 -0.92
CC024/GeniUnc f 5.5 0.14142   2   0.1 0.0257 5.4, 5.6 -0.28
CC027/GeniUnc f 5.95 0.54467   4 0.27234 0.0915 5.4, 6.7 0.12
CC028/GeniUnc f 6.0 0.65574   3 0.37859 0.1093 5.4, 6.7 0.17
CC030/GeniUnc f 4.68 1.3554   5 0.60614 0.2896 3.5, 6.2 -1.01
CC032/GeniUnc f 4.08 0.42071   5 0.18815 0.1031 3.4, 4.5 -1.54
CC035/Unc f 6.025 0.70887   4 0.35444 0.1177 5.4, 6.9 0.19
CC036/Unc f 5.32 0.56303   5 0.25179 0.1058 4.9, 6.3 -0.44
CC037/TauUnc f 4.52 0.75961   5 0.33971 0.1681 3.8, 5.7 -1.15
CC040/TauUnc f 7.7667 4.2736   3 2.4673 0.5502 5.2, 12.7 1.74
CC041/TauUnc f 7.175 1.4454   4 0.7227 0.2014 6.1, 9.3 1.22
CC045/GeniUnc f 5.7 0.60828   3 0.35119 0.1067 5.3, 6.4 -0.1
CC059/TauUnc f 5.88 1.0895   5 0.48724 0.1853 4.2, 7.2 0.06
CC063/Unc f 4.1667 0.50332   3 0.29059 0.1208 3.7, 4.7 -1.46
CC071/TauUnc f 4.9667 0.20817   3 0.12019 0.0419 4.8, 5.2 -0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 5.36 0.5791758005 6.5157273157 4.2042726843
CC002/Unc f 6.22 0.5791758005 7.3757273157 5.0642726843
CC004/TauUnc f 7.6 0.6475382304 8.8921424206 6.3078575794
CC006/TauUnc f 6.875 0.6475382304 8.1671424206 5.5828575794
CC008/GeniUnc f 6.7333333333 0.7477127432 8.2253708821 5.2412957846
CC011/Unc f 7.66 0.5791758005 8.8157273157 6.5042726843
CC012/GeniUnc f 4.86 0.5791758005 6.0157273157 3.7042726843
CC019/TauUnc f 4.78 0.5791758005 5.9357273157 3.6242726843
CC024/GeniUnc f 5.5 0.9157573476 7.3273653358 3.6726346642
CC027/GeniUnc f 5.95 0.6475382304 7.2421424206 4.6578575794
CC028/GeniUnc f 6.0 0.7477127432 7.4920375488 4.5079624512
CC030/GeniUnc f 4.68 0.5791758005 5.8357273157 3.5242726843
CC032/GeniUnc f 4.08 0.5791758005 5.2357273157 2.9242726843
CC035/Unc f 6.025 0.6475382304 7.3171424206 4.7328575794
CC036/Unc f 5.32 0.5791758005 6.4757273157 4.1642726843
CC037/TauUnc f 4.52 0.5791758005 5.6757273157 3.3642726843
CC040/TauUnc f 7.7666666667 0.7477127432 9.2587042154 6.2746291179
CC041/TauUnc f 7.175 0.6475382304 8.4671424206 5.8828575794
CC045/GeniUnc f 5.7 0.7477127432 7.1920375488 4.2079624512
CC059/TauUnc f 5.88 0.5791758005 7.0357273157 4.7242726843
CC063/Unc f 4.1666666667 0.7477127432 5.6587042154 2.6746291179
CC071/TauUnc f 4.9666666667 0.7477127432 6.4587042154 3.4746291179




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA