Project measure / variable:   Bennett4   CHO_post_HFHS

ID, description, units MPD:114772   CHO_post_HFHS   plasma choline amount, post-diet   [µM]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma choline amount, post-diet HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means19.641   µM
Median of the strain means20.0   µM
SD of the strain means± 3.1367
Coefficient of variation (CV)0.1597
Min–max range of strain means13.8   –   26.22   µM
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 924.3758 44.0179 3.045 0.0002
Residuals 76 1098.6442 14.4558


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 21.04 5.1096   5 2.2851 0.2429 15.8, 27.5 0.45
CC002/Unc f 23.62 3.8519   5 1.7226 0.1631 19.1, 28.6 1.27
CC004/TauUnc f 19.9 3.3121   5 1.4812 0.1664 15.1, 22.8 0.08
CC006/TauUnc f 20.875 4.5697   4 2.2849 0.2189 15.3, 26.1 0.39
CC008/GeniUnc f 20.525 1.5564   4 0.77822 0.0758 19.4, 22.7 0.28
CC011/Unc f 18.08 3.7178   5 1.6626 0.2056 14.1, 23.1 -0.5
CC012/GeniUnc f 22.68 4.616   5 2.0643 0.2035 18.1, 29.6 0.97
CC019/TauUnc f 18.4 2.3098   5 1.033 0.1255 14.8, 20.6 -0.4
CC024/GeniUnc f 15.95 1.0607   2   0.75 0.0665 15.2, 16.7 -1.18
CC027/GeniUnc f 21.02 1.9817   5 0.88623 0.0943 18.5, 23.4 0.44
CC028/GeniUnc f 23.6 5.8132   4 2.9066 0.2463 19.8, 32.1 1.26
CC030/GeniUnc f 15.98 1.3737   5 0.61433 0.086 13.7, 17.1 -1.17
CC032/GeniUnc f 13.8 1.5524   5 0.69426 0.1125 12.1, 15.7 -1.86
CC035/Unc f 18.66 3.0648   5 1.3706 0.1642 14.1, 22.5 -0.31
CC036/Unc f 26.22 5.1222   5 2.2907 0.1954 18.2, 30.8 2.1
CC037/TauUnc f 21.76 2.5599   5 1.1448 0.1176 18.2, 24.8 0.68
CC040/TauUnc f 22.75 5.3482   4 2.6741 0.2351 18.3, 30.5 0.99
CC041/TauUnc f 16.32 5.9184   5 2.6468 0.3626 9.5, 24.4 -1.06
CC045/GeniUnc f 17.475 3.1117   4 1.5558 0.1781 13.5, 20.1 -0.69
CC059/TauUnc f 17.82 4.7188   5 2.1103 0.2648 11.5, 21.6 -0.58
CC063/Unc f 15.533 2.2368   3 1.2914 0.144 13.1, 17.5 -1.31
CC071/TauUnc f 20.1 0.72111   3 0.41633 0.0359 19.3, 20.7 0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 21.04 1.7003437475 24.4265280689 17.6534719311
CC002/Unc f 23.62 1.7003437475 27.0065280689 20.2334719311
CC004/TauUnc f 19.9 1.7003437475 23.2865280689 16.5134719311
CC006/TauUnc f 20.875 1.9010421023 24.6612534849 17.0887465151
CC008/GeniUnc f 20.525 1.9010421023 24.3112534849 16.7387465151
CC011/Unc f 18.08 1.7003437475 21.4665280689 14.6934719311
CC012/GeniUnc f 22.68 1.7003437475 26.0665280689 19.2934719311
CC019/TauUnc f 18.4 1.7003437475 21.7865280689 15.0134719311
CC024/GeniUnc f 15.95 2.6884795237 21.3045710289 10.5954289711
CC027/GeniUnc f 21.02 1.7003437475 24.4065280689 17.6334719311
CC028/GeniUnc f 23.6 1.9010421023 27.3862534849 19.8137465151
CC030/GeniUnc f 15.98 1.7003437475 19.3665280689 12.5934719311
CC032/GeniUnc f 13.8 1.7003437475 17.1865280689 10.4134719311
CC035/Unc f 18.66 1.7003437475 22.0465280689 15.2734719311
CC036/Unc f 26.22 1.7003437475 29.6065280689 22.8334719311
CC037/TauUnc f 21.76 1.7003437475 25.1465280689 18.3734719311
CC040/TauUnc f 22.75 1.9010421023 26.5362534849 18.9637465151
CC041/TauUnc f 16.32 1.7003437475 19.7065280689 12.9334719311
CC045/GeniUnc f 17.475 1.9010421023 21.2612534849 13.6887465151
CC059/TauUnc f 17.82 1.7003437475 21.2065280689 14.4334719311
CC063/Unc f 15.5333333333 2.195134339 19.9053222707 11.1613443959
CC071/TauUnc f 20.1 2.195134339 24.4719889374 15.7280110626




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA