Project measure / variable:   Bennett4   CHO_base_HP

ID, description, units MPD:114769   CHO_base_HP   plasma choline amount, baseline   [µM]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma choline amount, baseline HP group

CC028/GeniUncCC040/TauUncCC006/TauUncCC024/GeniUncCC011/UncCC012/GeniUncCC035/UncCC002/UncCC036/UncCC008/GeniUncCC059/TauUncCC071/TauUncCC004/TauUncCC019/TauUncCC041/TauUncCC030/GeniUncCC027/GeniUncCC001/UncCC037/TauUncCC045/GeniUncCC063/UncCC032/GeniUnc µM 1618202224262830323436femalemale


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means23.658   µM
Median of the strain means23.17   µM
SD of the strain means± 3.1918
Coefficient of variation (CV)0.1349
Min–max range of strain means19.06   –   31.35   µM
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 884.9597 42.1409 2.8398 0.0004
Residuals 79 1172.3287 14.8396


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 22 (22)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
CC001/Unc f 21.3 4.4922   5 2.009 0.2109 17.2, 28.2 -0.74
CC002/Unc f 24.62 4.3734   5 1.9559 0.1776 21.1, 32.0 0.3
CC004/TauUnc f 22.62 4.9272   5 2.2035 0.2178 15.3, 28.9 -0.33
CC006/TauUnc f 27.775 6.1451   4 3.0726 0.2212 22.5, 36.6 1.29
CC008/GeniUnc f 24.025 2.5474   4 1.2737 0.106 21.7, 26.7 0.12
CC011/Unc f 25.74 3.9941   5 1.7862 0.1552 21.3, 32.1 0.65
CC012/GeniUnc f 25.2 2.6048   5 1.1649 0.1034 21.6, 27.8 0.48
CC019/TauUnc f 22.44 3.8978   5 1.7432 0.1737 17.8, 28.6 -0.38
CC024/GeniUnc f 27.55 3.3234   2   2.35 0.1206 25.2, 29.9 1.22
CC027/GeniUnc f 22.14 2.4684   5 1.1039 0.1115 20.7, 26.5 -0.48
CC028/GeniUnc f 31.35 3.3521   4 1.6761 0.1069 29.1, 36.3 2.41
CC030/GeniUnc f 22.32 2.5626   5 1.146 0.1148 19.0, 24.9 -0.42
CC032/GeniUnc f 19.06 1.9178   5 0.85767 0.1006 17.0, 21.2 -1.44
CC035/Unc f 24.86 2.1126   5 0.94478 0.085 22.9, 28.3 0.38
CC036/Unc f 24.38 2.8657   5 1.2816 0.1175 21.5, 28.3 0.23
CC037/TauUnc f 19.82 4.9847   5 2.2292 0.2515 15.7, 28.2 -1.2
CC040/TauUnc f 28.3 5.8805   5 2.6298 0.2078 20.4, 35.4 1.45
CC041/TauUnc f 22.36 5.3196   5 2.379 0.2379 15.8, 29.7 -0.41
CC045/GeniUnc f 19.2 1.7146   4 0.85732 0.0893 17.7, 21.6 -1.4
CC059/TauUnc f 23.48 3.0128   5 1.3474 0.1283 20.2, 27.5 -0.06
CC063/Unc f 19.067 2.2234   3 1.2837 0.1166 16.5, 20.4 -1.44
CC071/TauUnc f 22.86 4.0863   5 1.8275 0.1788 17.8, 28.2 -0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 21.3 1.722765415 24.7290787825 17.8709212175
CC002/Unc f 24.62 1.722765415 28.0490787825 21.1909212175
CC004/TauUnc f 22.62 1.722765415 26.0490787825 19.1909212175
CC006/TauUnc f 27.775 1.9261102886 31.6088266289 23.9411733711
CC008/GeniUnc f 24.025 1.9261102886 27.8588266289 20.1911733711
CC011/Unc f 25.74 1.722765415 29.1690787825 22.3109212175
CC012/GeniUnc f 25.2 1.722765415 28.6290787825 21.7709212175
CC019/TauUnc f 22.44 1.722765415 25.8690787825 19.0109212175
CC024/GeniUnc f 27.55 2.7239312928 32.9718496144 22.1281503856
CC027/GeniUnc f 22.14 1.722765415 25.5690787825 18.7109212175
CC028/GeniUnc f 31.35 1.9261102886 35.1838266289 27.5161733711
CC030/GeniUnc f 22.32 1.722765415 25.7490787825 18.8909212175
CC032/GeniUnc f 19.06 1.722765415 22.4890787825 15.6309212175
CC035/Unc f 24.86 1.722765415 28.2890787825 21.4309212175
CC036/Unc f 24.38 1.722765415 27.8090787825 20.9509212175
CC037/TauUnc f 19.82 1.722765415 23.2490787825 16.3909212175
CC040/TauUnc f 28.3 1.722765415 31.7290787825 24.8709212175
CC041/TauUnc f 22.36 1.722765415 25.7890787825 18.9309212175
CC045/GeniUnc f 19.2 1.9261102886 23.0338266289 15.3661733711
CC059/TauUnc f 23.48 1.722765415 26.9090787825 20.0509212175
CC063/Unc f 19.0666666667 2.2240805872 23.4935883391 14.6397449942
CC071/TauUnc f 22.86 1.722765415 26.2890787825 19.4309212175




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA