Project measure / variable:   Bennett4   CHO_base_HP

ID, description, units MPD:114769   CHO_base_HP   plasma choline amount, baseline   [µM]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma choline amount, baseline HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means23.658   µM
Median of the strain means23.17   µM
SD of the strain means± 3.1918
Coefficient of variation (CV)0.1349
Min–max range of strain means19.06   –   31.35   µM
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 884.9597 42.1409 2.8398 0.0004
Residuals 79 1172.3287 14.8396


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 21.3 4.4922   5 2.009 0.2109 17.2, 28.2 -0.74
CC002/Unc f 24.62 4.3734   5 1.9559 0.1776 21.1, 32.0 0.3
CC004/TauUnc f 22.62 4.9272   5 2.2035 0.2178 15.3, 28.9 -0.33
CC006/TauUnc f 27.775 6.1451   4 3.0726 0.2212 22.5, 36.6 1.29
CC008/GeniUnc f 24.025 2.5474   4 1.2737 0.106 21.7, 26.7 0.12
CC011/Unc f 25.74 3.9941   5 1.7862 0.1552 21.3, 32.1 0.65
CC012/GeniUnc f 25.2 2.6048   5 1.1649 0.1034 21.6, 27.8 0.48
CC019/TauUnc f 22.44 3.8978   5 1.7432 0.1737 17.8, 28.6 -0.38
CC024/GeniUnc f 27.55 3.3234   2   2.35 0.1206 25.2, 29.9 1.22
CC027/GeniUnc f 22.14 2.4684   5 1.1039 0.1115 20.7, 26.5 -0.48
CC028/GeniUnc f 31.35 3.3521   4 1.6761 0.1069 29.1, 36.3 2.41
CC030/GeniUnc f 22.32 2.5626   5 1.146 0.1148 19.0, 24.9 -0.42
CC032/GeniUnc f 19.06 1.9178   5 0.85767 0.1006 17.0, 21.2 -1.44
CC035/Unc f 24.86 2.1126   5 0.94478 0.085 22.9, 28.3 0.38
CC036/Unc f 24.38 2.8657   5 1.2816 0.1175 21.5, 28.3 0.23
CC037/TauUnc f 19.82 4.9847   5 2.2292 0.2515 15.7, 28.2 -1.2
CC040/TauUnc f 28.3 5.8805   5 2.6298 0.2078 20.4, 35.4 1.45
CC041/TauUnc f 22.36 5.3196   5 2.379 0.2379 15.8, 29.7 -0.41
CC045/GeniUnc f 19.2 1.7146   4 0.85732 0.0893 17.7, 21.6 -1.4
CC059/TauUnc f 23.48 3.0128   5 1.3474 0.1283 20.2, 27.5 -0.06
CC063/Unc f 19.067 2.2234   3 1.2837 0.1166 16.5, 20.4 -1.44
CC071/TauUnc f 22.86 4.0863   5 1.8275 0.1788 17.8, 28.2 -0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 21.3 1.722765415 24.7290787825 17.8709212175
CC002/Unc f 24.62 1.722765415 28.0490787825 21.1909212175
CC004/TauUnc f 22.62 1.722765415 26.0490787825 19.1909212175
CC006/TauUnc f 27.775 1.9261102886 31.6088266289 23.9411733711
CC008/GeniUnc f 24.025 1.9261102886 27.8588266289 20.1911733711
CC011/Unc f 25.74 1.722765415 29.1690787825 22.3109212175
CC012/GeniUnc f 25.2 1.722765415 28.6290787825 21.7709212175
CC019/TauUnc f 22.44 1.722765415 25.8690787825 19.0109212175
CC024/GeniUnc f 27.55 2.7239312928 32.9718496144 22.1281503856
CC027/GeniUnc f 22.14 1.722765415 25.5690787825 18.7109212175
CC028/GeniUnc f 31.35 1.9261102886 35.1838266289 27.5161733711
CC030/GeniUnc f 22.32 1.722765415 25.7490787825 18.8909212175
CC032/GeniUnc f 19.06 1.722765415 22.4890787825 15.6309212175
CC035/Unc f 24.86 1.722765415 28.2890787825 21.4309212175
CC036/Unc f 24.38 1.722765415 27.8090787825 20.9509212175
CC037/TauUnc f 19.82 1.722765415 23.2490787825 16.3909212175
CC040/TauUnc f 28.3 1.722765415 31.7290787825 24.8709212175
CC041/TauUnc f 22.36 1.722765415 25.7890787825 18.9309212175
CC045/GeniUnc f 19.2 1.9261102886 23.0338266289 15.3661733711
CC059/TauUnc f 23.48 1.722765415 26.9090787825 20.0509212175
CC063/Unc f 19.0666666667 2.2240805872 23.4935883391 14.6397449942
CC071/TauUnc f 22.86 1.722765415 26.2890787825 19.4309212175




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA