Project measure / variable:   Bennett4   TG_base_HFHS

ID, description, units MPD:114762   TG_base_HFHS   plasma triglyceride amount, baseline   [mg/dL]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Bennett4 - plasma triglyceride amount, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means134.5   mg/dL
Median of the strain means127.2   mg/dL
SD of the strain means± 41.461
Coefficient of variation (CV)0.3083
Min–max range of strain means75.52   –   232.0   mg/dL
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 175272.5445 8346.3116 7.9796 < 0.0001
Residuals 79 82630.4092 1045.9545


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 163.1 16.928   5 7.5703 0.1038 148.0, 192.0 0.69
CC002/Unc f 216.2 36.786   5 16.451 0.1701 168.0, 250.0 1.97
CC004/TauUnc f 167.2 17.964   5 8.0337 0.1074 138.0, 183.0 0.79
CC006/TauUnc f 105.8 14.361   4 7.1807 0.1358 90.0, 123.0 -0.69
CC008/GeniUnc f 124.4 24.71   4 12.355 0.1987 101.5, 159.0 -0.24
CC011/Unc f 78.3 18.261   5 8.1664 0.2332 60.0, 99.0 -1.35
CC012/GeniUnc f 123.6 16.622   5 7.4337 0.1345 105.0, 144.0 -0.26
CC019/TauUnc f 103.5 25.5   5 11.404 0.2464 81.0, 147.0 -0.75
CC024/GeniUnc f 131.2 1.0607   2   0.75 0.0081 130.5, 132.0 -0.08
CC027/GeniUnc f 138.7 18.62   5 8.3271 0.1342 117.0, 156.0 0.1
CC028/GeniUnc f 117.8 23.157   4 11.579 0.1967 96.0, 150.0 -0.4
CC030/GeniUnc f 140.3 21.534   5 9.6302 0.1535 105.0, 160.0 0.14
CC032/GeniUnc f 125.4 23.155   5 10.355 0.1847 100.5, 162.0 -0.22
CC035/Unc f 94.2 12.112   5 5.4166 0.1286 75.0, 105.0 -0.97
CC036/Unc f 232.0 97.47   5 43.59 0.4202 136.0, 396.0 2.35
CC037/TauUnc f 75.52 16.142   5 7.2188 0.2137 51.0, 93.0 -1.42
CC040/TauUnc f 130.8 26.715   5 11.947 0.2042 99.0, 168.0 -0.09
CC041/TauUnc f 102.6 15.022   5 6.7183 0.1464 87.0, 121.5 -0.77
CC045/GeniUnc f 197.2 58.45   4 29.224 0.2963 117.0, 255.0 1.51
CC059/TauUnc f 96.6 20.169   5 9.02 0.2088 75.0, 117.0 -0.91
CC063/Unc f 129.1 34.383   3 19.851 0.2663 90.0, 154.5 -0.13
CC071/TauUnc f 164.7 25.816   5 11.545 0.1567 138.0, 198.0 0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 163.1 14.4634335233 191.8887442971 134.3112557029
CC002/Unc f 216.2 14.4634335233 244.9887442971 187.4112557029
CC004/TauUnc f 167.2 14.4634335233 195.9887442971 138.4112557029
CC006/TauUnc f 105.75 16.1706102731 137.9367946176 73.5632053824
CC008/GeniUnc f 124.375 16.1706102731 156.5617946176 92.1882053824
CC011/Unc f 78.3 14.4634335233 107.0887442971 49.5112557029
CC012/GeniUnc f 123.6 14.4634335233 152.3887442971 94.8112557029
CC019/TauUnc f 103.5 14.4634335233 132.2887442971 74.7112557029
CC024/GeniUnc f 131.25 22.86869636 176.7690014775 85.7309985225
CC027/GeniUnc f 138.7 14.4634335233 167.4887442971 109.9112557029
CC028/GeniUnc f 117.75 16.1706102731 149.9367946176 85.5632053824
CC030/GeniUnc f 140.3 14.4634335233 169.0887442971 111.5112557029
CC032/GeniUnc f 125.4 14.4634335233 154.1887442971 96.6112557029
CC035/Unc f 94.2 14.4634335233 122.9887442971 65.4112557029
CC036/Unc f 231.96 14.4634335233 260.7487442971 203.1712557029
CC037/TauUnc f 75.52 14.4634335233 104.3087442971 46.7312557029
CC040/TauUnc f 130.8 14.4634335233 159.5887442971 102.0112557029
CC041/TauUnc f 102.6 14.4634335233 131.3887442971 73.8112557029
CC045/GeniUnc f 197.25 16.1706102731 229.4367946176 165.0632053824
CC059/TauUnc f 96.6 14.4634335233 125.3887442971 67.8112557029
CC063/Unc f 129.1333333333 18.6722123882 166.2994424069 91.9672242597
CC071/TauUnc f 164.7 14.4634335233 193.4887442971 135.9112557029




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA