Project measure / variable:   Bennett4   NEFA_post_HFHS

ID, description, units MPD:114760   NEFA_post_HFHS   plasma nonesterified fatty acid amount, post-diet   [mEq/L]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Bennett4 - plasma nonesterified fatty acid amount, post-diet HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.82673   mEq/L
Median of the strain means0.76365   mEq/L
SD of the strain means± 0.15706
Coefficient of variation (CV)0.19
Min–max range of strain means0.57   –   1.105   mEq/L
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2.2545 0.1074 1.7107 0.0474
Residuals 76 4.7696 0.0628


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.999 0.09099   5 0.04069 0.0911 0.9, 1.08 1.1
CC002/Unc f 1.089 0.31671   5 0.14164 0.2908 0.6, 1.44 1.67
CC004/TauUnc f 0.728 0.09731   5 0.04352 0.1337 0.6, 0.84 -0.63
CC006/TauUnc f 0.7275 0.11587   4 0.05793 0.1593 0.57, 0.84 -0.63
CC008/GeniUnc f 0.7725 0.20982   4 0.10491 0.2716 0.57, 1.02 -0.35
CC011/Unc f 0.942 0.25154   5 0.11249 0.267 0.63, 1.32 0.73
CC012/GeniUnc f 0.747 0.29554   5 0.13217 0.3956 0.33, 1.14 -0.51
CC019/TauUnc f 0.705 0.06708   5 0.03 0.0952 0.63, 0.81 -0.78
CC024/GeniUnc f 0.705 0.23335   2   0.165 0.331 0.54, 0.87 -0.78
CC027/GeniUnc f 0.78 0.33136   5 0.14819 0.4248 0.48, 1.29 -0.3
CC028/GeniUnc f 0.79125 0.30481   4 0.1524 0.3852 0.405, 1.05 -0.23
CC030/GeniUnc f 0.7284 0.16097   5 0.07199 0.221 0.54, 0.96 -0.63
CC032/GeniUnc f 1.05 0.34857   5 0.15588 0.332 0.6, 1.56 1.42
CC035/Unc f 0.66 0.20125   5 0.09 0.3049 0.45, 0.99 -1.06
CC036/Unc f 0.852 0.32021   5 0.1432 0.3758 0.45, 1.215 0.16
CC037/TauUnc f 0.57 0.1423   5 0.06364 0.2497 0.42, 0.75 -1.63
CC040/TauUnc f 0.735 0.22782   4 0.11391 0.31 0.45, 0.96 -0.58
CC041/TauUnc f 0.7548 0.14978   5 0.06699 0.1984 0.66, 1.02 -0.46
CC045/GeniUnc f 1.0537 0.44537   4 0.22269 0.4227 0.675, 1.68 1.45
CC059/TauUnc f 0.693 0.19338   5 0.08648 0.279 0.48, 0.99 -0.85
CC063/Unc f 1.0 0.22517   3 0.13 0.2252 0.78, 1.23 1.1
CC071/TauUnc f 1.105 0.44607   3 0.25754 0.4037 0.84, 1.62 1.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.999 0.1120340585 1.2221351657 0.7758648343
CC002/Unc f 1.089 0.1120340585 1.3121351657 0.8658648343
CC004/TauUnc f 0.728 0.1120340585 0.9511351657 0.5048648343
CC006/TauUnc f 0.7275 0.1252578853 0.9769726993 0.4780273007
CC008/GeniUnc f 0.7725 0.1252578853 1.0219726993 0.5230273007
CC011/Unc f 0.942 0.1120340585 1.1651351657 0.7188648343
CC012/GeniUnc f 0.747 0.1120340585 0.9701351657 0.5238648343
CC019/TauUnc f 0.705 0.1120340585 0.9281351657 0.4818648343
CC024/GeniUnc f 0.705 0.1771414002 1.0578076748 0.3521923252
CC027/GeniUnc f 0.78 0.1120340585 1.0031351657 0.5568648343
CC028/GeniUnc f 0.79125 0.1252578853 1.0407226993 0.5417773007
CC030/GeniUnc f 0.7284 0.1120340585 0.9515351657 0.5052648343
CC032/GeniUnc f 1.05 0.1120340585 1.2731351657 0.8268648343
CC035/Unc f 0.66 0.1120340585 0.8831351657 0.4368648343
CC036/Unc f 0.852 0.1120340585 1.0751351657 0.6288648343
CC037/TauUnc f 0.57 0.1120340585 0.7931351657 0.3468648343
CC040/TauUnc f 0.735 0.1252578853 0.9844726993 0.4855273007
CC041/TauUnc f 0.7548 0.1120340585 0.9779351657 0.5316648343
CC045/GeniUnc f 1.05375 0.1252578853 1.3032226993 0.8042773007
CC059/TauUnc f 0.693 0.1120340585 0.9161351657 0.4698648343
CC063/Unc f 1.0 0.1446353476 1.2880662602 0.7119337398
CC071/TauUnc f 1.105 0.1446353476 1.3930662602 0.8169337398




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA