Project measure / variable:   Bennett4   water_free_post_HFHS

ID, description, units MPD:114724   water_free_post_HFHS   free water mass, post-diet   [g]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure MRI
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  STRAIN COMPARISON PLOT
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Bennett4 - free water mass, post-diet HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.15691   g
Median of the strain means0.11   g
SD of the strain means± 0.21494
Coefficient of variation (CV)1.3698
Min–max range of strain means0.05   –   1.0975   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 3.9175 0.1865 1.1314 0.3365
Residuals 76 12.5315 0.1649


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.058 0.0228   5 0.0102 0.3932 0.03, 0.08 -0.46
CC002/Unc f 0.104 0.06877   5 0.03076 0.6613 0.04, 0.22 -0.25
CC004/TauUnc f 0.18 0.11358   5 0.05079 0.631 0.09, 0.37 0.11
CC006/TauUnc f 0.1925 0.13376   4 0.06688 0.6949 0.05, 0.37 0.17
CC008/GeniUnc f 0.1275 0.02062   4 0.01031 0.1617 0.11, 0.15 -0.14
CC011/Unc f 0.172 0.05263   5 0.02354 0.306 0.11, 0.24 0.07
CC012/GeniUnc f 0.08 0.02944   4 0.01472 0.368 0.04, 0.11 -0.36
CC019/TauUnc f 0.11 0.02121   5 0.00948683 0.1928 0.09, 0.14 -0.22
CC024/GeniUnc f 0.06 0.01414   2   0.01 0.2357 0.05, 0.07 -0.45
CC027/GeniUnc f 0.082 0.05762   5 0.02577 0.7027 0.03, 0.18 -0.35
CC028/GeniUnc f 0.2075 0.025   4 0.0125 0.1205 0.18, 0.24 0.24
CC030/GeniUnc f 0.082 0.05263   5 0.02354 0.6418 0.04, 0.17 -0.35
CC032/GeniUnc f 0.112 0.07563   5 0.03382 0.6753 -0.21
CC035/Unc f 0.052 0.03421   5 0.0153 0.6578 -0.49
CC036/Unc f 0.136 0.06107   5 0.02731 0.4491 0.07, 0.21 -0.1
CC037/TauUnc f 0.122 0.05215   5 0.02332 0.4275 0.06, 0.19 -0.16
CC040/TauUnc f 0.1425 0.05252   4 0.02626 0.3686 0.07, 0.19 -0.07
CC041/TauUnc f 0.072 0.0228   5 0.0102 0.3167 0.05, 0.1 -0.4
CC045/GeniUnc f 0.1025 0.07136   4 0.03568 0.6962 0.02, 0.18 -0.25
CC059/TauUnc f 0.05 0.05745   5 0.02569 1.1489 -0.5
CC063/Unc f 0.11 0.01   3 0.0057735 0.0909 0.1, 0.12 -0.22
CC071/TauUnc f 1.0975 2.0223   4 1.0112 1.8427 0.04, 4.13 4.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.058 0.1815976611 0.4196830876 -0.3036830876
CC002/Unc f 0.104 0.1815976611 0.4656830876 -0.2576830876
CC004/TauUnc f 0.18 0.1815976611 0.5416830876 -0.1816830876
CC006/TauUnc f 0.1925 0.2030323574 0.5968739851 -0.2118739851
CC008/GeniUnc f 0.1275 0.2030323574 0.5318739851 -0.2768739851
CC011/Unc f 0.172 0.1815976611 0.5336830876 -0.1896830876
CC012/GeniUnc f 0.08 0.2030323574 0.4843739851 -0.3243739851
CC019/TauUnc f 0.11 0.1815976611 0.4716830876 -0.2516830876
CC024/GeniUnc f 0.06 0.2871311135 0.6318711741 -0.5118711741
CC027/GeniUnc f 0.082 0.1815976611 0.4436830876 -0.2796830876
CC028/GeniUnc f 0.2075 0.2030323574 0.6118739851 -0.1968739851
CC030/GeniUnc f 0.082 0.1815976611 0.4436830876 -0.2796830876
CC032/GeniUnc f 0.112 0.1815976611 0.4736830876 -0.2496830876
CC035/Unc f 0.052 0.1815976611 0.4136830876 -0.3096830876
CC036/Unc f 0.136 0.1815976611 0.4976830876 -0.2256830876
CC037/TauUnc f 0.122 0.1815976611 0.4836830876 -0.2396830876
CC040/TauUnc f 0.1425 0.2030323574 0.5468739851 -0.2618739851
CC041/TauUnc f 0.072 0.1815976611 0.4336830876 -0.2896830876
CC045/GeniUnc f 0.1025 0.2030323574 0.5068739851 -0.3018739851
CC059/TauUnc f 0.05 0.1815976611 0.4116830876 -0.3116830876
CC063/Unc f 0.11 0.2344415724 0.5769308583 -0.3569308583
CC071/TauUnc f 1.0975 0.2030323574 1.5018739851 0.6931260149




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA