Project measure / variable:   Bennett4   water_free_post_HP

ID, description, units MPD:114723   water_free_post_HP   free water mass, post-diet   [g]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure MRI
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  STRAIN COMPARISON PLOT
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Bennett4 - free water mass, post-diet HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.09146   g
Median of the strain means0.07934   g
SD of the strain means± 0.04318
Coefficient of variation (CV)0.4721
Min–max range of strain means0.0425   –   0.195   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 0.1781 0.0085 2.3161 0.0041
Residuals 78 0.2857 0.0037


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.044 0.04037   5 0.01806 0.9176 -1.1
CC002/Unc f 0.066 0.04159   5 0.0186 0.6302 -0.59
CC004/TauUnc f 0.174 0.09762   5 0.04366 0.561 0.07, 0.3 1.91
CC006/TauUnc f 0.0425 0.02062   4 0.01031 0.4851 0.02, 0.07 -1.13
CC008/GeniUnc f 0.07 0.0216   4 0.0108 0.3086 0.04, 0.09 -0.5
CC011/Unc f 0.124 0.06107   5 0.02731 0.4925 0.06, 0.2 0.75
CC012/GeniUnc f 0.054 0.02302   5 0.0103 0.4263 0.02, 0.07 -0.87
CC019/TauUnc f 0.1 0.03317   5 0.01483 0.3317 0.07, 0.14 0.2
CC024/GeniUnc f 0.09 0.11314   2   0.08 1.2571 0.01, 0.17 -0.03
CC027/GeniUnc f 0.136 0.17038   5 0.0762 1.2528 0.04, 0.44 1.03
CC028/GeniUnc f 0.195 0.06245   4 0.03122 0.3203 0.12, 0.26 2.4
CC030/GeniUnc f 0.046 0.03362   5 0.01503 0.7308 -1.05
CC032/GeniUnc f 0.138 0.04438   5 0.01985 0.3216 0.09, 0.21 1.08
CC035/Unc f 0.058 0.04604   5 0.02059 0.7939 0.01, 0.13 -0.77
CC036/Unc f 0.1375 0.06801   4 0.034 0.4946 0.07, 0.23 1.07
CC037/TauUnc f 0.07 0.04301   5 0.01924 0.6145 0.03, 0.13 -0.5
CC040/TauUnc f 0.082 0.0502   5 0.02245 0.6122 -0.22
CC041/TauUnc f 0.114 0.05128   5 0.02293 0.4499 0.03, 0.17 0.52
CC045/GeniUnc f 0.0525 0.025   4 0.0125 0.4762 0.04, 0.09 -0.9
CC059/TauUnc f 0.06 0.02   5 0.00894427 0.3333 0.03, 0.08 -0.73
CC063/Unc f 0.07667 0.01528   3 0.00881917 0.1992 0.06, 0.09 -0.34
CC071/TauUnc f 0.082 0.02588   5 0.01158 0.3157 0.05, 0.11 -0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.044 0.0270645793 0.0978814384 -0.0098814384
CC002/Unc f 0.066 0.0270645793 0.1198814384 0.0121185616
CC004/TauUnc f 0.174 0.0270645793 0.2278814384 0.1201185616
CC006/TauUnc f 0.0425 0.0302591196 0.1027412795 -0.0177412795
CC008/GeniUnc f 0.07 0.0302591196 0.1302412795 0.0097587205
CC011/Unc f 0.124 0.0270645793 0.1778814384 0.0701185616
CC012/GeniUnc f 0.054 0.0270645793 0.1078814384 0.0001185616
CC019/TauUnc f 0.1 0.0270645793 0.1538814384 0.0461185616
CC024/GeniUnc f 0.09 0.0427928573 0.1751940344 0.0048059656
CC027/GeniUnc f 0.136 0.0270645793 0.1898814384 0.0821185616
CC028/GeniUnc f 0.195 0.0302591196 0.2552412795 0.1347587205
CC030/GeniUnc f 0.046 0.0270645793 0.0998814384 -0.0078814384
CC032/GeniUnc f 0.138 0.0270645793 0.1918814384 0.0841185616
CC035/Unc f 0.058 0.0270645793 0.1118814384 0.0041185616
CC036/Unc f 0.1375 0.0302591196 0.1977412795 0.0772587205
CC037/TauUnc f 0.07 0.0270645793 0.1238814384 0.0161185616
CC040/TauUnc f 0.082 0.0270645793 0.1358814384 0.0281185616
CC041/TauUnc f 0.114 0.0270645793 0.1678814384 0.0601185616
CC045/GeniUnc f 0.0525 0.0302591196 0.1127412795 -0.0077412795
CC059/TauUnc f 0.06 0.0270645793 0.1138814384 0.0061185616
CC063/Unc f 0.0766666667 0.0349402216 0.1462273045 0.0071060288
CC071/TauUnc f 0.082 0.0270645793 0.1358814384 0.0281185616




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA