Project measure / variable:   Bennett4   water_free_base_HFHS

ID, description, units MPD:114722   water_free_base_HFHS   free water mass, baseline   [g]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure MRI
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  STRAIN COMPARISON PLOT
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Bennett4 - free water mass, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.09789   g
Median of the strain means0.076   g
SD of the strain means± 0.07114
Coefficient of variation (CV)0.7268
Min–max range of strain means0.015   –   0.368   g
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 0.4999 0.0238 0.7803 0.7343
Residuals 80 2.4403 0.0305


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.044 0.02074   5 0.00927362 0.4713 0.02, 0.07 -0.76
CC002/Unc f 0.07 0.04796   5 0.02145 0.6851 0.02, 0.12 -0.39
CC004/TauUnc f 0.088 0.06723   5 0.03007 0.764 0.01, 0.19 -0.14
CC006/TauUnc f 0.18 0.07832   4 0.03916 0.4351 0.08, 0.26 1.15
CC008/GeniUnc f 0.105 0.05802   4 0.02901 0.5526 0.03, 0.17 0.1
CC011/Unc f 0.124 0.08473   5 0.03789 0.6833 0.05, 0.27 0.37
CC012/GeniUnc f 0.09 0.04301   5 0.01924 0.4779 0.04, 0.13 -0.11
CC019/TauUnc f 0.05 0.01225   5 0.00547723 0.2449 0.04, 0.07 -0.67
CC024/GeniUnc f 0.015 0.02121   2   0.015 1.4142 -1.17
CC027/GeniUnc f 0.114 0.13921   5 0.06226 1.2212 0.04, 0.36 0.23
CC028/GeniUnc f 0.125 0.04796   4 0.02398 0.3837 0.08, 0.18 0.38
CC030/GeniUnc f 0.076 0.02191   5 0.00979796 0.2883 0.05, 0.11 -0.31
CC032/GeniUnc f 0.074 0.07021   5 0.0314 0.9488 -0.34
CC035/Unc f 0.076 0.0498   5 0.02227 0.6553 -0.31
CC036/Unc f 0.054 0.06189   5 0.02768 1.1461 -0.62
CC037/TauUnc f 0.04 0.02449   5 0.01095 0.6124 0.01, 0.07 -0.81
CC040/TauUnc f 0.1 0.06364   5 0.02846 0.6364 0.04, 0.19 0.03
CC041/TauUnc f 0.072 0.05263   5 0.02354 0.731 0.02, 0.13 -0.36
CC045/GeniUnc f 0.15 0.17416   4 0.08708 1.1611 0.04, 0.41 0.73
CC059/TauUnc f 0.066 0.02966   5 0.01327 0.4495 0.03, 0.1 -0.45
CC063/Unc f 0.0725 0.02363   4 0.01181 0.3259 0.04, 0.09 -0.36
CC071/TauUnc f 0.368 0.72258   5 0.32315 1.9635 0.02, 1.66 3.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.044 0.0781076981 0.1994392729 -0.1114392729
CC002/Unc f 0.07 0.0781076981 0.2254392729 -0.0854392729
CC004/TauUnc f 0.088 0.0781076981 0.2434392729 -0.0674392729
CC006/TauUnc f 0.18 0.0873270612 0.3537863903 0.0062136097
CC008/GeniUnc f 0.105 0.0873270612 0.2787863903 -0.0687863903
CC011/Unc f 0.124 0.0781076981 0.2794392729 -0.0314392729
CC012/GeniUnc f 0.09 0.0781076981 0.2454392729 -0.0654392729
CC019/TauUnc f 0.05 0.0781076981 0.2054392729 -0.1054392729
CC024/GeniUnc f 0.015 0.1234991144 0.2607710701 -0.2307710701
CC027/GeniUnc f 0.114 0.0781076981 0.2694392729 -0.0414392729
CC028/GeniUnc f 0.125 0.0873270612 0.2987863903 -0.0487863903
CC030/GeniUnc f 0.076 0.0781076981 0.2314392729 -0.0794392729
CC032/GeniUnc f 0.074 0.0781076981 0.2294392729 -0.0814392729
CC035/Unc f 0.076 0.0781076981 0.2314392729 -0.0794392729
CC036/Unc f 0.054 0.0781076981 0.2094392729 -0.1014392729
CC037/TauUnc f 0.04 0.0781076981 0.1954392729 -0.1154392729
CC040/TauUnc f 0.1 0.0781076981 0.2554392729 -0.0554392729
CC041/TauUnc f 0.072 0.0781076981 0.2274392729 -0.0834392729
CC045/GeniUnc f 0.15 0.0873270612 0.3237863903 -0.0237863903
CC059/TauUnc f 0.066 0.0781076981 0.2214392729 -0.0894392729
CC063/Unc f 0.0725 0.0873270612 0.2462863903 -0.1012863903
CC071/TauUnc f 0.368 0.0781076981 0.5234392729 0.2125607271




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA