Project measure / variable:   Bennett4   water_free_base_HP

ID, description, units MPD:114721   water_free_base_HP   free water mass, baseline   [g]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure MRI
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  STRAIN COMPARISON PLOT
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Bennett4 - free water mass, baseline HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.08534   g
Median of the strain means0.079   g
SD of the strain means± 0.0342
Coefficient of variation (CV)0.4007
Min–max range of strain means0.036   –   0.1775   g
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 0.1053 0.005 1.2269 0.2533
Residuals 79 0.323 0.0041


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.036 0.01517   5 0.00678233 0.4213 0.02, 0.06 -1.44
CC002/Unc f 0.066 0.04037   5 0.01806 0.6117 -0.57
CC004/TauUnc f 0.098 0.05167   5 0.02311 0.5273 0.04, 0.16 0.37
CC006/TauUnc f 0.1775 0.08421   4 0.04211 0.4744 0.06, 0.26 2.69
CC008/GeniUnc f 0.0575 0.04992   4 0.02496 0.8681 0.01, 0.11 -0.81
CC011/Unc f 0.062 0.06301   5 0.02818 1.0163 0.01, 0.16 -0.68
CC012/GeniUnc f 0.07 0.02915   5 0.01304 0.4165 0.05, 0.12 -0.45
CC019/TauUnc f 0.08 0.04743   5 0.02121 0.5929 0.01, 0.14 -0.16
CC024/GeniUnc f 0.11 0.05657   2   0.04 0.5143 0.07, 0.15 0.72
CC027/GeniUnc f 0.07 0.08093   5 0.03619 1.1562 -0.45
CC028/GeniUnc f 0.125 0.04435   4 0.02217 0.3548 0.07, 0.17 1.16
CC030/GeniUnc f 0.11 0.06633   5 0.02966 0.603 0.02, 0.2 0.72
CC032/GeniUnc f 0.106 0.05595   5 0.02502 0.5278 0.05, 0.19 0.6
CC035/Unc f 0.0775 0.04113   4 0.02056 0.5307 0.04, 0.13 -0.23
CC036/Unc f 0.068 0.03114   5 0.01393 0.458 0.04, 0.12 -0.51
CC037/TauUnc f 0.086 0.02074   5 0.00927362 0.2411 0.07, 0.12 0.02
CC040/TauUnc f 0.082 0.05215   5 0.02332 0.636 -0.1
CC041/TauUnc f 0.078 0.02588   5 0.01158 0.3319 0.05, 0.1 -0.21
CC045/GeniUnc f 0.08 0.01826   4 0.00912871 0.2282 0.06, 0.1 -0.16
CC059/TauUnc f 0.042 0.03768   5 0.01685 0.8972 -1.27
CC063/Unc f 0.15 0.22015   4 0.11008 1.4677 0.03, 0.48 1.89
CC071/TauUnc f 0.046 0.03912   5 0.01749 0.8503 0.01, 0.11 -1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.036 0.0285960518 0.0929190173 -0.0209190173
CC002/Unc f 0.066 0.0285960518 0.1229190173 0.0090809827
CC004/TauUnc f 0.098 0.0285960518 0.1549190173 0.0410809827
CC006/TauUnc f 0.1775 0.0319713578 0.2411373959 0.1138626041
CC008/GeniUnc f 0.0575 0.0319713578 0.1211373959 -0.0061373959
CC011/Unc f 0.062 0.0285960518 0.1189190173 0.0050809827
CC012/GeniUnc f 0.07 0.0285960518 0.1269190173 0.0130809827
CC019/TauUnc f 0.08 0.0285960518 0.1369190173 0.0230809827
CC024/GeniUnc f 0.11 0.0452143279 0.1999968684 0.0200031316
CC027/GeniUnc f 0.07 0.0285960518 0.1269190173 0.0130809827
CC028/GeniUnc f 0.125 0.0319713578 0.1886373959 0.0613626041
CC030/GeniUnc f 0.11 0.0285960518 0.1669190173 0.0530809827
CC032/GeniUnc f 0.106 0.0285960518 0.1629190173 0.0490809827
CC035/Unc f 0.0775 0.0319713578 0.1411373959 0.0138626041
CC036/Unc f 0.068 0.0285960518 0.1249190173 0.0110809827
CC037/TauUnc f 0.086 0.0285960518 0.1429190173 0.0290809827
CC040/TauUnc f 0.082 0.0285960518 0.1389190173 0.0250809827
CC041/TauUnc f 0.078 0.0285960518 0.1349190173 0.0210809827
CC045/GeniUnc f 0.08 0.0319713578 0.1436373959 0.0163626041
CC059/TauUnc f 0.042 0.0285960518 0.0989190173 -0.0149190173
CC063/Unc f 0.15 0.0319713578 0.2136373959 0.0863626041
CC071/TauUnc f 0.046 0.0285960518 0.1029190173 -0.0109190173




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA