Project measure / variable:   Bennett4   lean_pct_post_HFHS

ID, description, units MPD:114720   lean_pct_post_HFHS   percentage of body weight that is lean, post-diet   [%]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure MRI
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - percentage of body weight that is lean, post-diet HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means71.74   %
Median of the strain means73.72   %
SD of the strain means± 8.0146
Coefficient of variation (CV)0.1117
Min–max range of strain means58.06   –   87.01   %
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 5993.5505 285.4072 9.4212 < 0.0001
Residuals 76 2302.3529 30.2941


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 63.72 2.2578   5 1.0097 0.0354 60.21, 65.3 -1.0
CC002/Unc f 75.35 5.3599   5 2.397 0.0711 67.32, 81.0 0.45
CC004/TauUnc f 60.15 8.3901   5 3.7522 0.1395 52.85, 74.25 -1.45
CC006/TauUnc f 62.14 5.275   4 2.6375 0.0849 54.27, 65.37 -1.2
CC008/GeniUnc f 66.94 2.6557   4 1.3279 0.0397 63.68, 69.81 -0.6
CC011/Unc f 67.63 7.1065   5 3.1781 0.1051 56.38, 75.98 -0.51
CC012/GeniUnc f 76.26 4.4483   4 2.2242 0.0583 71.33, 80.61 0.56
CC019/TauUnc f 87.01 0.97763   5 0.43721 0.0112 86.19, 88.64 1.91
CC024/GeniUnc f 74.42 3.4719   2   2.455 0.0466 71.97, 76.88 0.33
CC027/GeniUnc f 77.99 4.4247   5 1.9788 0.0567 70.6, 81.99 0.78
CC028/GeniUnc f 58.06 3.7002   4 1.8501 0.0637 54.78, 62.61 -1.71
CC030/GeniUnc f 84.38 1.6566   5 0.74085 0.0196 82.06, 86.56 1.58
CC032/GeniUnc f 73.11 6.4939   5 2.9042 0.0888 66.82, 83.3 0.17
CC035/Unc f 74.32 6.8386   5 3.0583 0.092 64.98, 81.51 0.32
CC036/Unc f 81.42 2.5085   5 1.1218 0.0308 78.68, 85.35 1.21
CC037/TauUnc f 69.08 4.4669   5 1.9977 0.0647 63.74, 75.43 -0.33
CC040/TauUnc f 66.41 2.6913   4 1.3457 0.0405 62.92, 69.32 -0.67
CC041/TauUnc f 75.74 5.0489   5 2.2579 0.0667 69.71, 81.75 0.5
CC045/GeniUnc f 74.76 8.5364   4 4.2682 0.1142 63.6, 84.38 0.38
CC059/TauUnc f 72.61 4.326   5 1.9347 0.0596 67.87, 77.64 0.11
CC063/Unc f 59.12 9.9828   3 5.7636 0.1688 48.179, 67.73 -1.57
CC071/TauUnc f 77.7 9.9333   4 4.9667 0.1278 64.18, 87.92 0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 63.722 2.4614677206 68.6244378386 58.8195621614
CC002/Unc f 75.352 2.4614677206 80.2544378386 70.4495621614
CC004/TauUnc f 60.152 2.4614677206 65.0544378386 55.2495621614
CC006/TauUnc f 62.1425 2.7520045738 67.6235921313 56.6614078687
CC008/GeniUnc f 66.935 2.7520045738 72.4160921313 61.4539078687
CC011/Unc f 67.632 2.4614677206 72.5344378386 62.7295621614
CC012/GeniUnc f 76.2625 2.7520045738 81.7435921313 70.7814078687
CC019/TauUnc f 87.012 2.4614677206 91.9144378386 82.1095621614
CC024/GeniUnc f 74.425 3.891922192 82.1764348287 66.6735651713
CC027/GeniUnc f 77.99 2.4614677206 82.8924378386 73.0875621614
CC028/GeniUnc f 58.0625 2.7520045738 63.5435921313 52.5814078687
CC030/GeniUnc f 84.376 2.4614677206 89.2784378386 79.4735621614
CC032/GeniUnc f 73.108 2.4614677206 78.0104378386 68.2055621614
CC035/Unc f 74.316 2.4614677206 79.2184378386 69.4135621614
CC036/Unc f 81.418 2.4614677206 86.3204378386 76.5155621614
CC037/TauUnc f 69.076 2.4614677206 73.9784378386 64.1735621614
CC040/TauUnc f 66.405 2.7520045738 71.8860921313 60.9239078687
CC041/TauUnc f 75.74 2.4614677206 80.6424378386 70.8375621614
CC045/GeniUnc f 74.76 2.7520045738 80.2410921313 69.2789078687
CC059/TauUnc f 72.614 2.4614677206 77.5164378386 67.7115621614
CC063/Unc f 59.123 3.177741163 65.4520200349 52.7939799651
CC071/TauUnc f 77.7 2.7520045738 83.1810921313 72.2189078687




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA