Project measure / variable:   Bennett4   fat_pct_post_HFHS

ID, description, units MPD:114712   fat_pct_post_HFHS   percentage of body weight that is fat, post-diet   [%]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure MRI
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - percentage of body weight that is fat, post-diet HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means20.644   %
Median of the strain means19.172   %
SD of the strain means± 8.5989
Coefficient of variation (CV)0.4165
Min–max range of strain means4.6849   –   35.744   %
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 7033.8975 334.9475 11.5215 < 0.0001
Residuals 76 2209.4349 29.0715


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 31.119 2.4217   5 1.083 0.0778 28.996, 34.667 1.22
CC002/Unc f 17.021 5.9521   5 2.6619 0.3497 11.13, 25.196 -0.42
CC004/TauUnc f 32.888 9.0287   5 4.0378 0.2745 18.34, 41.735 1.42
CC006/TauUnc f 30.666 6.168   4 3.084 0.2011 26.654, 39.833 1.17
CC008/GeniUnc f 26.829 2.7587   4 1.3794 0.1028 24.0, 30.095 0.72
CC011/Unc f 24.894 7.6121   5 3.4042 0.3058 16.316, 37.256 0.49
CC012/GeniUnc f 16.819 4.9735   4 2.4868 0.2957 12.21, 22.365 -0.44
CC019/TauUnc f 4.6849 1.1349   5 0.50754 0.2422 3.1707, 6.0625 -1.86
CC024/GeniUnc f 19.544 2.9394   2   2.0785 0.1504 17.466, 21.623 -0.13
CC027/GeniUnc f 13.887 4.7585   5 2.1281 0.3427 10.271, 21.962 -0.79
CC028/GeniUnc f 35.744 4.0883   4 2.0441 0.1144 30.795, 39.28 1.76
CC030/GeniUnc f 7.7586 2.4496   5 1.0955 0.3157 4.0764, 10.766 -1.5
CC032/GeniUnc f 18.8 7.4603   5 3.3364 0.3968 6.5979, 25.033 -0.21
CC035/Unc f 18.307 7.8824   5 3.5251 0.4306 10.27, 29.426 -0.27
CC036/Unc f 10.646 2.1974   5 0.98271 0.2064 6.9412, 12.682 -1.16
CC037/TauUnc f 24.605 4.4313   5 1.9817 0.1801 18.565, 29.681 0.46
CC040/TauUnc f 27.3 2.8928   4 1.4464 0.106 23.927, 30.984 0.77
CC041/TauUnc f 15.913 5.1108   5 2.2856 0.3212 10.0, 22.241 -0.55
CC045/GeniUnc f 18.398 9.5955   4 4.7978 0.5215 7.809, 31.107 -0.26
CC059/TauUnc f 21.003 4.2399   5 1.8961 0.2019 16.118, 25.87 0.04
CC063/Unc f 28.892 3.4682   3 2.0023 0.12 25.405, 32.341 0.96
CC071/TauUnc f 8.4529 2.9411   4 1.4706 0.3479 4.7917, 11.647 -1.42


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 31.1186 2.4112864573 35.9210931911 26.3161068089
CC002/Unc f 17.021 2.4112864573 21.8234931911 12.2185068089
CC004/TauUnc f 32.8882 2.4112864573 37.6906931911 28.0857068089
CC006/TauUnc f 30.66625 2.6959002159 36.0356006183 25.2968993817
CC008/GeniUnc f 26.82925 2.6959002159 32.1986006183 21.4598993817
CC011/Unc f 24.8938 2.4112864573 29.6962931911 20.0913068089
CC012/GeniUnc f 16.81875 2.6959002159 22.1881006183 11.4493993817
CC019/TauUnc f 4.68486 2.4112864573 9.4873531911 -0.1176331911
CC024/GeniUnc f 19.5445 3.8125786481 27.1379084656 11.9510915344
CC027/GeniUnc f 13.8872 2.4112864573 18.6896931911 9.0847068089
CC028/GeniUnc f 35.744 2.6959002159 41.1133506183 30.3746493817
CC030/GeniUnc f 7.7586 2.4112864573 12.5610931911 2.9561068089
CC032/GeniUnc f 18.79978 2.4112864573 23.6022731911 13.9972868089
CC035/Unc f 18.3072 2.4112864573 23.1096931911 13.5047068089
CC036/Unc f 10.64564 2.4112864573 15.4481331911 5.8431468089
CC037/TauUnc f 24.6052 2.4112864573 29.4076931911 19.8027068089
CC040/TauUnc f 27.29975 2.6959002159 32.6691006183 21.9303993817
CC041/TauUnc f 15.9128 2.4112864573 20.7152931911 11.1103068089
CC045/GeniUnc f 18.39825 2.6959002159 23.7676006183 13.0288993817
CC059/TauUnc f 21.0028 2.4112864573 25.8052931911 16.2003068089
CC063/Unc f 28.8916666667 3.1129574307 35.0916587164 22.6916746169
CC071/TauUnc f 8.4529 2.6959002159 13.8222506183 3.0835493817




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA