Project measure / variable:   Bennett4   fat_pct_base_HP

ID, description, units MPD:114709   fat_pct_base_HP   percentage of body weight that is fat, baseline   [%]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure MRI
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - percentage of body weight that is fat, baseline HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means14.611   %
Median of the strain means14.708   %
SD of the strain means± 5.3032
Coefficient of variation (CV)0.363
Min–max range of strain means3.3252   –   24.573   %
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2745.1586 130.7218 6.9802 < 0.0001
Residuals 79 1479.4847 18.7277


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 19.838 3.1708   5 1.418 0.1598 16.688, 24.783 0.99
CC002/Unc f 15.363 2.6499   5 1.1851 0.1725 12.582, 17.871 0.14
CC004/TauUnc f 16.579 7.7203   5 3.4526 0.4657 6.9591, 25.442 0.37
CC006/TauUnc f 18.635 6.3924   4 3.1962 0.343 13.022, 27.115 0.76
CC008/GeniUnc f 14.053 5.1634   4 2.5817 0.3674 8.6154, 19.707 -0.11
CC011/Unc f 15.825 4.6907   5 2.0978 0.2964 10.099, 23.095 0.23
CC012/GeniUnc f 12.408 4.2089   5 1.8823 0.3392 8.012, 19.226 -0.42
CC019/TauUnc f 3.3252 1.7115   5 0.76542 0.5147 1.1364, 4.9242 -2.13
CC024/GeniUnc f 19.104 1.8908   2   1.337 0.099 17.767, 20.441 0.85
CC027/GeniUnc f 8.5002 2.7081   5 1.2111 0.3186 6.0366, 12.246 -1.15
CC028/GeniUnc f 21.647 3.7444   4 1.8722 0.173 18.256, 26.966 1.33
CC030/GeniUnc f 9.765 1.8344   5 0.82038 0.1879 7.8808, 11.786 -0.91
CC032/GeniUnc f 11.048 2.0153   5 0.90128 0.1824 9.3939, 14.56 -0.67
CC035/Unc f 13.554 5.9115   4 2.9558 0.4361 8.6935, 22.159 -0.2
CC036/Unc f 16.073 4.4494   5 1.9898 0.2768 11.701, 22.112 0.28
CC037/TauUnc f 13.253 4.0012   5 1.7894 0.3019 7.6331, 18.762 -0.26
CC040/TauUnc f 24.573 4.5789   5 2.0477 0.1863 18.676, 29.28 1.88
CC041/TauUnc f 8.0221 2.6182   5 1.1709 0.3264 5.8291, 12.514 -1.24
CC045/GeniUnc f 22.912 4.5756   4 2.2878 0.1997 17.526, 28.647 1.57
CC059/TauUnc f 13.624 5.8451   5 2.614 0.429 7.0899, 20.895 -0.19
CC063/Unc f 15.574 4.1054   4 2.0527 0.2636 11.633, 19.299 0.18
CC071/TauUnc f 7.7652 4.6246   5 2.0682 0.5956 3.1429, 13.796 -1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 19.8382 1.9353374036 23.6903927419 15.9860072581
CC002/Unc f 15.3628 1.9353374036 19.2149927419 11.5106072581
CC004/TauUnc f 16.57902 1.9353374036 20.4312127419 12.7268272581
CC006/TauUnc f 18.63475 2.163772997 22.9416324167 14.3278675833
CC008/GeniUnc f 14.0526 2.163772997 18.3594824167 9.7457175833
CC011/Unc f 15.825 1.9353374036 19.6771927419 11.9728072581
CC012/GeniUnc f 12.4082 1.9353374036 16.2603927419 8.5560072581
CC019/TauUnc f 3.32524 1.9353374036 7.1774327419 -0.5269527419
CC024/GeniUnc f 19.104 3.0600371182 25.1948515252 13.0131484748
CC027/GeniUnc f 8.50016 1.9353374036 12.3523527419 4.6479672581
CC028/GeniUnc f 21.64675 2.163772997 25.9536324167 17.3398675833
CC030/GeniUnc f 9.76496 1.9353374036 13.6171527419 5.9127672581
CC032/GeniUnc f 11.04818 1.9353374036 14.9003727419 7.1959872581
CC035/Unc f 13.554125 2.163772997 17.8610074167 9.2472425833
CC036/Unc f 16.0728 1.9353374036 19.9249927419 12.2206072581
CC037/TauUnc f 13.25302 1.9353374036 17.1052127419 9.4008272581
CC040/TauUnc f 24.5728 1.9353374036 28.4249927419 20.7206072581
CC041/TauUnc f 8.02208 1.9353374036 11.8742727419 4.1698872581
CC045/GeniUnc f 22.91175 2.163772997 27.2186324167 18.6048675833
CC059/TauUnc f 13.62356 1.9353374036 17.4757527419 9.7713672581
CC063/Unc f 15.57425 2.163772997 19.8811324167 11.2673675833
CC071/TauUnc f 7.7652 1.9353374036 11.6173927419 3.9130072581




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA