Project measure / variable:   Bennett4   fat_base_HFHS

ID, description, units MPD:114706   fat_base_HFHS   fat mass, baseline   [g]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure MRI
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  STRAIN COMPARISON PLOT
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Bennett4 - fat mass, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means2.8565   g
Median of the strain means2.948   g
SD of the strain means± 1.2604
Coefficient of variation (CV)0.4413
Min–max range of strain means0.686   –   5.62   g
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 152.6046 7.2669 5.7544 < 0.0001
Residuals 80 101.0264 1.2628


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 3.928 1.3642   5 0.6101 0.3473 2.73, 5.69 0.85
CC002/Unc f 3.0 0.8211   5 0.36721 0.2737 2.14, 3.97 0.11
CC004/TauUnc f 4.364 1.3906   5 0.62187 0.3186 3.0, 5.93 1.2
CC006/TauUnc f 3.4725 1.2368   4 0.6184 0.3562 2.64, 5.3 0.49
CC008/GeniUnc f 3.685 0.83604   4 0.41802 0.2269 2.94, 4.51 0.66
CC011/Unc f 4.014 1.1489   5 0.51381 0.2862 2.18, 5.0 0.92
CC012/GeniUnc f 1.962 0.29567   5 0.13223 0.1507 1.68, 2.36 -0.71
CC019/TauUnc f 0.686 0.16832   5 0.07527 0.2454 0.54, 0.93 -1.72
CC024/GeniUnc f 4.035 0.95459   2   0.675 0.2366 3.36, 4.71 0.94
CC027/GeniUnc f 1.208 0.35961   5 0.16082 0.2977 0.78, 1.59 -1.31
CC028/GeniUnc f 5.62 2.0491   4 1.0246 0.3646 3.84, 7.82 2.19
CC030/GeniUnc f 1.684 0.28711   5 0.1284 0.1705 1.26, 2.07 -0.93
CC032/GeniUnc f 1.814 0.27862   5 0.1246 0.1536 1.37, 2.09 -0.83
CC035/Unc f 2.948 0.89497   5 0.40024 0.3036 1.95, 3.9 0.07
CC036/Unc f 2.552 0.70066   5 0.31334 0.2746 1.58, 3.47 -0.24
CC037/TauUnc f 2.824 1.0048   5 0.44935 0.3558 1.67, 3.73 -0.03
CC040/TauUnc f 4.306 2.8006   5 1.2525 0.6504 0.19, 7.47 1.15
CC041/TauUnc f 1.686 0.68376   5 0.30579 0.4056 0.83, 2.56 -0.93
CC045/GeniUnc f 3.11 1.9713   4 0.98565 0.6339 1.1, 4.92 0.2
CC059/TauUnc f 2.948 0.48174   5 0.21544 0.1634 2.13, 3.28 0.07
CC063/Unc f 1.9775 0.40302   4 0.20151 0.2038 1.45, 2.38 -0.7
CC071/TauUnc f 1.018 0.36506   5 0.16326 0.3586 0.57, 1.58 -1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 3.928 0.502559499 4.9281252759 2.9278747241
CC002/Unc f 3.0 0.502559499 4.0001252759 1.9998747241
CC004/TauUnc f 4.364 0.502559499 5.3641252759 3.3638747241
CC006/TauUnc f 3.4725 0.5618786012 4.5906740515 2.3543259485
CC008/GeniUnc f 3.685 0.5618786012 4.8031740515 2.5668259485
CC011/Unc f 4.014 0.502559499 5.0141252759 3.0138747241
CC012/GeniUnc f 1.962 0.502559499 2.9621252759 0.9618747241
CC019/TauUnc f 0.686 0.502559499 1.6861252759 -0.3141252759
CC024/GeniUnc f 4.035 0.7946163382 5.6163369087 2.4536630913
CC027/GeniUnc f 1.208 0.502559499 2.2081252759 0.2078747241
CC028/GeniUnc f 5.62 0.5618786012 6.7381740515 4.5018259485
CC030/GeniUnc f 1.684 0.502559499 2.6841252759 0.6838747241
CC032/GeniUnc f 1.814 0.502559499 2.8141252759 0.8138747241
CC035/Unc f 2.948 0.502559499 3.9481252759 1.9478747241
CC036/Unc f 2.552 0.502559499 3.5521252759 1.5518747241
CC037/TauUnc f 2.824 0.502559499 3.8241252759 1.8238747241
CC040/TauUnc f 4.306 0.502559499 5.3061252759 3.3058747241
CC041/TauUnc f 1.686 0.502559499 2.6861252759 0.6858747241
CC045/GeniUnc f 3.11 0.5618786012 4.2281740515 1.9918259485
CC059/TauUnc f 2.948 0.502559499 3.9481252759 1.9478747241
CC063/Unc f 1.9775 0.5618786012 3.0956740515 0.8593259485
CC071/TauUnc f 1.018 0.502559499 2.0181252759 0.0178747241




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA