Project measure / variable:   Bennett4   fat_base_HP

ID, description, units MPD:114705   fat_base_HP   fat mass, baseline   [g]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure MRI
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  STRAIN COMPARISON PLOT
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Bennett4 - fat mass, baseline HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means2.8631   g
Median of the strain means2.7832   g
SD of the strain means± 1.2991
Coefficient of variation (CV)0.4537
Min–max range of strain means0.41   –   5.81   g
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 164.01 7.81 7.3445 < 0.0001
Residuals 79 84.0065 1.0634


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 3.452 0.746   5 0.33362 0.2161 2.62, 4.56 0.45
CC002/Unc f 3.078 0.52112   5 0.23305 0.1693 2.46, 3.61 0.17
CC004/TauUnc f 3.566 1.9189   5 0.85817 0.5381 1.19, 5.75 0.54
CC006/TauUnc f 3.58 1.4786   4 0.73931 0.413 2.37, 5.64 0.55
CC008/GeniUnc f 3.135 1.4468   4 0.72338 0.4615 1.68, 4.71 0.21
CC011/Unc f 3.412 0.79886   5 0.35726 0.2341 2.04, 3.98 0.42
CC012/GeniUnc f 1.99 0.76108   5 0.34037 0.3825 1.33, 3.23 -0.67
CC019/TauUnc f 0.41 0.20748   5 0.09279 0.5061 0.15, 0.65 -1.89
CC024/GeniUnc f 4.15 0.69296   2   0.49 0.167 3.66, 4.64 0.99
CC027/GeniUnc f 1.47 0.53493   5 0.23923 0.3639 0.99, 2.29 -1.07
CC028/GeniUnc f 4.955 1.568   4 0.78401 0.3165 3.56, 7.2 1.61
CC030/GeniUnc f 1.588 0.35209   5 0.15746 0.2217 1.19, 1.98 -0.98
CC032/GeniUnc f 2.052 0.42446   5 0.18983 0.2069 1.83, 2.81 -0.62
CC035/Unc f 2.7625 1.5283   4 0.76413 0.5532 1.73, 5.03 -0.08
CC036/Unc f 2.688 0.73162   5 0.32719 0.2722 1.72, 3.56 -0.13
CC037/TauUnc f 2.632 0.89307   5 0.39939 0.3393 1.29, 3.79 -0.18
CC040/TauUnc f 5.81 1.8432   5 0.82431 0.3172 3.81, 7.73 2.27
CC041/TauUnc f 1.492 0.43712   5 0.19548 0.293 1.16, 2.24 -1.06
CC045/GeniUnc f 4.435 1.0682   4 0.53411 0.2409 3.4, 5.93 1.21
CC059/TauUnc f 2.804 1.1602   5 0.51887 0.4138 1.34, 3.97 -0.05
CC063/Unc f 2.4975 0.54175   4 0.27087 0.2169 1.84, 3.03 -0.28
CC071/TauUnc f 1.03 0.60975   5 0.27269 0.592 0.44, 1.89 -1.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 3.452 0.4611667372 4.369929429 2.534070571
CC002/Unc f 3.078 0.4611667372 3.995929429 2.160070571
CC004/TauUnc f 3.566 0.4611667372 4.483929429 2.648070571
CC006/TauUnc f 3.58 0.5156000867 4.6062763009 2.5537236991
CC008/GeniUnc f 3.135 0.5156000867 4.1612763009 2.1087236991
CC011/Unc f 3.412 0.4611667372 4.329929429 2.494070571
CC012/GeniUnc f 1.99 0.4611667372 2.907929429 1.072070571
CC019/TauUnc f 0.41 0.4611667372 1.327929429 -0.507929429
CC024/GeniUnc f 4.15 0.7291686353 5.6013738635 2.6986261365
CC027/GeniUnc f 1.47 0.4611667372 2.387929429 0.552070571
CC028/GeniUnc f 4.955 0.5156000867 5.9812763009 3.9287236991
CC030/GeniUnc f 1.588 0.4611667372 2.505929429 0.670070571
CC032/GeniUnc f 2.052 0.4611667372 2.969929429 1.134070571
CC035/Unc f 2.7625 0.5156000867 3.7887763009 1.7362236991
CC036/Unc f 2.688 0.4611667372 3.605929429 1.770070571
CC037/TauUnc f 2.632 0.4611667372 3.549929429 1.714070571
CC040/TauUnc f 5.81 0.4611667372 6.727929429 4.892070571
CC041/TauUnc f 1.492 0.4611667372 2.409929429 0.574070571
CC045/GeniUnc f 4.435 0.5156000867 5.4612763009 3.4087236991
CC059/TauUnc f 2.804 0.4611667372 3.721929429 1.886070571
CC063/Unc f 2.4975 0.5156000867 3.5237763009 1.4712236991
CC071/TauUnc f 1.03 0.4611667372 1.947929429 0.112070571




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA