Project measure / variable:   Auwerx2   eWAT_CD

ID, description, units MPD:114665   eWAT_CD   gonadal fat pad weight   [g]  CD  
Data set, strains Auwerx2   inbred w/CC8   9 strains     sex: both     age: 21wks
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  STRAIN COMPARISON PLOT
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Auwerx2 - gonadal fat pad weight CD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.9335   g 0.72908   g
Median of the strain means0.21552   g 0.60796   g
SD of the strain means± 2.0332 ± 0.63962
Coefficient of variation (CV)2.1781 0.8773
Min–max range of strain means0.0281   –   6.3322   g 0.05594   –   2.1775   g
Mean sample size per strain4.4   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1926 0.1926 2.8464 0.0965
strain 7 105.1371 15.0196 221.9245 < 0.0001
sex:strain 7 41.592 5.9417 87.7928 < 0.0001
Residuals 63 4.2638 0.0677


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.26258 0.09046   5 0.04045 0.3445 0.1734, 0.4152 -0.33
129S1/SvImJ m 0.5559 0.1495   5 0.06686 0.2689 0.4271, 0.759 -0.27
A/J f 0.6717 0.09415   5 0.04211 0.1402 0.6127, 0.8384 -0.13
A/J m 0.60796 0.10639   5 0.04758 0.175 0.4778, 0.6955 -0.19
C57BL/6J f 0.12064 0.04415   5 0.01974 0.3659 0.0715, 0.1913 -0.4
C57BL/6J m 0.76784 0.32087   5 0.1435 0.4179 0.5326, 1.2775 0.06
CAST/EiJ f 0.1485 0.0   1   0.0 0.0 0.1485, 0.1485 -0.39
CAST/EiJ m 0.11157 0.04852   3 0.02801 0.4349 0.0609, 0.1576 -0.97
DBA/2J f 0.41234 0.1417   5 0.06337 0.3436 0.2466, 0.5577 -0.26
DBA/2J m 0.7821 0.1127   5 0.0504 0.1441 0.6479, 0.9057 0.08
NOD/ShiLtJ f 0.20991 0.11844   7 0.04477 0.5642 0.0124, 0.3181 -0.36
NOD/ShiLtJ m 0.37028 0.10126   5 0.04528 0.2735 0.2787, 0.5263 -0.56
NZO/HlLtJ f 6.3322 0.74125   4 0.37063 0.1171 5.3826, 7.1693 2.66
NZO/HlLtJ m 2.1775 0.62304   5 0.27863 0.2861 1.1261, 2.7653 2.26
PWK/PhJ f 0.21552 0.149   5 0.06664 0.6914 0.077, 0.4578 -0.35
PWK/PhJ m 1.1326 0.15285   5 0.06836 0.135 0.9419, 1.3167 0.63
WSB/EiJ f 0.0281 0.00150997   3 0.00087178 0.0537 0.0265, 0.0295 -0.45
WSB/EiJ m 0.05594 0.02022   5 0.00904431 0.3615 0.0309, 0.077 -1.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.26258 0.1163433189 0.4950735711 0.0300864289
129S1/SvImJ m 0.5559 0.1163433189 0.7883935711 0.3234064289
A/J f 0.6717 0.1163433189 0.9041935711 0.4392064289
A/J m 0.60796 0.1163433189 0.8404535711 0.3754664289
C57BL/6J f 0.12064 0.1163433189 0.3531335711 -0.1118535711
C57BL/6J m 0.76784 0.1163433189 1.0003335711 0.5353464289
DBA/2J f 0.41234 0.1163433189 0.6448335711 0.1798464289
DBA/2J m 0.7821 0.1163433189 1.0145935711 0.5496064289
NOD/ShiLtJ f 0.2099142857 0.098328051 0.4064072165 0.0134213549
NOD/ShiLtJ m 0.37028 0.1163433189 0.6027735711 0.1377864289
NZO/HlLtJ f 6.3322 0.1300757849 6.5921357146 6.0722642854
NZO/HlLtJ m 2.17754 0.1163433189 2.4100335711 1.9450464289
PWK/PhJ f 0.21552 0.1163433189 0.4480135711 -0.0169735711
PWK/PhJ m 1.13256 0.1163433189 1.3650535711 0.9000664289
WSB/EiJ f 0.0281 0.1501985789 0.3282479096 -0.2720479096
WSB/EiJ m 0.05594 0.1163433189 0.2884335711 -0.1765535711


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.40924 0.0822671498 0.5736377807 0.2448422193
A/J both 0.63983 0.0822671498 0.8042277807 0.4754322193
C57BL/6J both 0.44424 0.0822671498 0.6086377807 0.2798422193
DBA/2J both 0.59722 0.0822671498 0.7616177807 0.4328222193
NOD/ShiLtJ both 0.2900971429 0.0761645808 0.4422999126 0.1378943731
NZO/HlLtJ both 4.25487 0.0872574892 4.4292401783 4.0804998217
PWK/PhJ both 0.67404 0.0822671498 0.8384377807 0.5096422193
WSB/EiJ both 0.04202 0.0949939221 0.2318502059 -0.1478102059




  GWAS USING LINEAR MIXED MODELS