Project measure / variable:   Auwerx2   bw_19wks_basal_HFD

ID, description, units MPD:114622   bw_19wks_basal_HFD   body weight, prior to basal activity test, at 19 wks of age   [g]  HFD  
Data set, strains Auwerx2   inbred w/CC8   9 strains     sex: both     age: 19wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx2 - body weight, prior to basal activity test, at 19 wks of age HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains8 strains
Mean of the strain means31.105   g 31.576   g
Median of the strain means25.727   g 31.975   g
SD of the strain means± 19.509 ± 9.8678
Coefficient of variation (CV)0.6272 0.3125
Min–max range of strain means13.653   –   78.54   g 17.49   –   45.913   g
Mean sample size per strain3.8   mice 4.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 796.224 796.224 102.5713 < 0.0001
strain 6 4140.3686 690.0614 88.8952 < 0.0001
sex:strain 6 288.8296 48.1383 6.2013 0.0001
Residuals 42 326.0308 7.7626


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 23.76 0.82362   5 0.36833 0.0347 22.55, 24.8 -0.38
129S1/SvImJ m 34.88 0.89095   2   0.63 0.0255 34.25, 35.51 0.33
A/J f 23.54 2.3261   4 1.1631 0.0988 22.15, 27.02 -0.39
A/J m 28.882 1.6126   5 0.72119 0.0558 26.73, 30.71 -0.27
C57BL/6J f 27.917 3.9905   3 2.3039 0.1429 24.82, 32.42 -0.16
C57BL/6J m 45.913 3.5464   4 1.7732 0.0772 40.71, 48.18 1.45
CAST/EiJ f 14.232 1.1028   5 0.49317 0.0775 13.13, 15.86 -0.86
CAST/EiJ m 19.6 2.4042   2   1.7 0.1227 17.9, 21.3 -1.21
DBA/2J f 37.176 4.5862   5 2.051 0.1234 31.15, 41.88 0.31
DBA/2J m 41.894 3.2235   5 1.4416 0.0769 38.65, 47.21 1.05
NOD/ShiLtJ f 35.4 0.0   1   0.0 0.0 35.4, 35.4 0.22
NOD/ShiLtJ m 34.128 1.0957   5 0.49 0.0321 32.87, 35.47 0.26
NZO/HlLtJ f 78.54 2.0032   5 0.89588 0.0255 76.76, 80.9 2.43
PWK/PhJ f 25.727 3.2679   3 1.8867 0.127 22.01, 28.15 -0.28
PWK/PhJ m 29.822 3.8723   5 1.7318 0.1298 25.45, 34.24 -0.18
WSB/EiJ f 13.653 0.62613   3 0.36149 0.0459 13.05, 14.3 -0.89
WSB/EiJ m 17.49 1.4003   5 0.62623 0.0801 16.33, 19.68 -1.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 23.76 1.2460045765 26.2745390375 21.2454609625
129S1/SvImJ m 34.88 1.9701062184 38.855835312 30.904164688
A/J f 23.54 1.3930754667 26.35134011 20.72865989
A/J m 28.882 1.2460045765 31.3965390375 26.3674609625
C57BL/6J f 27.9166666667 1.6085849914 31.1629226053 24.6704107281
C57BL/6J m 45.9125 1.3930754667 48.72384011 43.10115989
CAST/EiJ f 14.232 1.2460045765 16.7465390375 11.7174609625
CAST/EiJ m 19.6 1.9701062184 23.575835312 15.624164688
DBA/2J f 37.176 1.2460045765 39.6905390375 34.6614609625
DBA/2J m 41.894 1.2460045765 44.4085390375 39.3794609625
PWK/PhJ f 25.7266666667 1.6085849914 28.9729226053 22.4804107281
PWK/PhJ m 29.822 1.2460045765 32.3365390375 27.3074609625
WSB/EiJ f 13.6533333333 1.6085849914 16.8995892719 10.4070773947
WSB/EiJ m 17.49 1.2460045765 20.0045390375 14.9754609625


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 29.32 1.1655305569 31.672135891 26.967864109
A/J both 26.211 0.9345034324 28.0969042782 24.3250957218
C57BL/6J both 36.9145833333 1.0639789625 39.0617798097 34.7673868569
CAST/EiJ both 16.916 1.1655305569 19.268135891 14.563864109
DBA/2J both 39.535 0.8810582855 41.313047605 37.756952395
PWK/PhJ both 27.7743333333 1.0173584766 29.8274458601 25.7212208066
WSB/EiJ both 15.5716666667 1.0173584766 17.6247791934 13.5185541399




  GWAS USING LINEAR MIXED MODELS