Project measure / variable:   CSNA03   diff_trials_rev_acq_do_JAX

ID, description, units MPD:113853   diff_trials_rev_acq_do_JAX   reversal trials minus acquisition trials (reversal learning assay), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means43.368   n 53.65   n
Median of the strain means37.833   n 57.75   n
SD of the strain means± 29.654 ± 28.456
Coefficient of variation (CV)0.6838 0.5304
Min–max range of strain means-7.6667   –   100.0   n -18.0   –   78.55   n
Mean sample size per strain32.0   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11858.0358 11858.0358 1.8936 0.1694
strain 8 63733.9263 7966.7408 1.2722 0.2558
sex:strain 8 28232.2704 3529.0338 0.5635 0.8079
Residuals 479 2999635.0029 6262.286


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f -7.6667 27.574   3 15.92 -3.5966 -34.0, 21.0 -1.72
129S1/SvImJ m 57.75 89.8   4 44.901 1.555 -24.0, 181.0 0.14
A/J f 37.833 64.07   6 26.155 1.6934 -41.0, 113.0 -0.19
A/J m -18.0 100.7   5 45.033 -5.5943 -172.0, 81.0 -2.52
C57BL/6J f 53.07 92.52   14 24.727 1.7433 -25.0, 339.0 0.33
C57BL/6J m 78.55 95.64   11 28.836 1.2176 -99.0, 284.0 0.88
CAST/EiJ f 29.6 61.6   10 19.478 2.0809 -77.0, 128.0 -0.46
CAST/EiJ m 62.5 91.53   8 32.362 1.4646 -50.0, 200.0 0.31
J:DO f 57.6 72.22   227 4.7931 1.2537 -139.0, 307.0 0.48
J:DO m 68.05 86.61   154 6.9794 1.2727 -175.0, 351.0 0.51
NOD/ShiLtJ f 31.375 50.03   8 17.688 1.5945 -20.0, 127.0 -0.4
NOD/ShiLtJ m 52.36 62.89   11 18.963 1.2011 -78.0, 145.0 -0.05
NZO/HlLtJ f 61.0 14.731   3 8.5049 0.2415 45.0, 74.0 0.59
NZO/HlLtJ m 53.0 22.627   2   16.0 0.4269 37.0, 69.0 -0.02
PWK/PhJ f 100.0 108.4   9 36.147 1.0844 4.0, 377.0 1.91
PWK/PhJ m 74.12 128.8   8 45.553 1.7382 -97.0, 307.0 0.72
WSB/EiJ f 27.5 45.217   8 15.987 1.6443 -30.0, 94.0 -0.54
WSB/EiJ m 54.5 40.752   6 16.637 0.7477 15.0, 121.0 0.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f -7.6666666667 45.68838663 82.1077627438 -97.4410960771
129S1/SvImJ m 57.75 39.5673034795 135.4969364797 -19.9969364797
A/J f 37.8333333333 32.3065680076 101.3134411466 -25.64677448
A/J m -18.0 35.3900721067 51.5389740044 -87.5389740044
C57BL/6J f 53.0714285714 21.1496133341 94.6289141683 11.5139429745
C57BL/6J m 78.5454545455 23.8599817469 125.4286212551 31.6622878359
CAST/EiJ f 29.6 25.0245599733 78.7714800753 -19.5714800753
CAST/EiJ m 62.5 27.9783086037 117.4753860013 7.5246139987
J:DO f 57.6035242291 5.2523483393 67.9240150585 47.2830333997
J:DO m 68.0519480519 6.3768483537 80.5820014115 55.5218946924
NOD/ShiLtJ f 31.375 27.9783086037 86.3503860013 -23.6003860013
NOD/ShiLtJ m 52.3636363636 23.8599817469 99.2468030732 5.480469654
NZO/HlLtJ f 61.0 45.68838663 150.7744294105 -28.7744294105
NZO/HlLtJ m 53.0 55.9566172073 162.9507720026 -56.9507720026
PWK/PhJ f 100.0 26.3782023197 151.8312909865 48.1687090135
PWK/PhJ m 74.125 27.9783086037 129.1003860013 19.1496139987
WSB/EiJ f 27.5 27.9783086037 82.4753860013 -27.4753860013
WSB/EiJ m 54.5 32.3065680076 117.9801078133 -8.9801078133


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.0416666667 30.2200272067 84.4218702449 -34.3385369115
A/J both 9.9166666667 23.9591920781 56.9947746192 -37.1614412859
C57BL/6J both 65.8084415584 15.9421208842 97.1335749574 34.4833081595
CAST/EiJ both 46.05 18.76841998 82.9286100565 9.1713899435
J:DO both 62.8277361405 4.1307190053 70.9443051225 54.7111671586
NOD/ShiLtJ both 41.8693181818 18.3853506989 77.9952243528 5.7434120108
NZO/HlLtJ both 57.0 36.1198410923 127.9729181448 -13.9729181448
PWK/PhJ both 87.0625 19.2262535998 124.8407205487 49.2842794513
WSB/EiJ both 41.0 21.3687861655 82.9881446184 -0.9881446184




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA