Project measure / variable:   CSNA03   diff_trials_rev_acq_cc_JAX

ID, description, units MPD:113851   diff_trials_rev_acq_cc_JAX   reversal trials minus acquisition trials (reversal learning assay), CC   [n]  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - reversal trials minus acquisition trials (reversal learning assay), CC



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means41.57   n 53.5   n
Median of the strain means37.833   n 55.33   n
SD of the strain means± 67.08 ± 58.07
Coefficient of variation (CV)1.6136 1.0853
Min–max range of strain means-128.0   –   245.0   n -96.0   –   223.5   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 14795.9618 14795.9618 1.8475 0.1757
strain 34 323388.8148 9511.4357 1.1876 0.2339
sex:strain 34 247025.4414 7265.4542 0.9072 0.6192
Residuals 192 1537689.4346 8008.7991


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f -7.6667 27.574   3 15.92 -3.5966 -34.0, 21.0 -0.73
129S1/SvImJ m 57.75 89.8   4 44.901 1.555 -24.0, 181.0 0.07
A/J f 37.833 64.07   6 26.155 1.6934 -41.0, 113.0 -0.06
A/J m -18.0 100.7   5 45.033 -5.5943 -172.0, 81.0 -1.23
C57BL/6J f 53.07 92.52   14 24.727 1.7433 -25.0, 339.0 0.17
C57BL/6J m 78.55 95.64   11 28.836 1.2176 -99.0, 284.0 0.43
CAST/EiJ f 29.6 61.6   10 19.478 2.0809 -77.0, 128.0 -0.18
CAST/EiJ m 62.5 91.53   8 32.362 1.4646 -50.0, 200.0 0.15
CC001/UncJ f 82.0 46.872   3 27.062 0.5716 29.0, 118.0 0.6
CC001/UncJ m 36.5 120.9   2   85.5 3.3127 -49.0, 122.0 -0.29
CC002/UncJ f 68.75 28.535   4 14.268 0.4151 36.0, 105.0 0.41
CC002/UncJ m 69.75 7.0415   4 3.5208 0.101 64.0, 80.0 0.28
CC003/UncJ f 245.0 22.627   2   16.0 0.0924 229.0, 261.0 3.03
CC003/UncJ m 85.0 70.55   3 40.731 0.83 16.0, 157.0 0.54
CC004/TauUncJ f -128.0 0.0   1   0.0 0.0 -128.0, -128.0 -2.53
CC004/TauUncJ m 223.5 225.6   2   159.5 1.0092 64.0, 383.0 2.93
CC005/TauUncJ f 2.0 137.5   3 79.4 68.7623 -137.0, 138.0 -0.59
CC005/TauUncJ m 68.0 22.627   2   16.0 0.3328 52.0, 84.0 0.25
CC006/TauUncJ f -28.0 63.64   2   45.0 -2.2728 -73.0, 17.0 -1.04
CC006/TauUncJ m 58.0 113.1   2   80.0 1.9506 -22.0, 138.0 0.08
CC007/UncJ f 91.0 0.0   1   0.0 0.0 91.0, 91.0 0.74
CC008/GeniUncJ f -13.0 0.0   1   0.0 0.0 -13.0, -13.0 -0.81
CC008/GeniUncJ m 37.0 0.0   1   0.0 0.0 37.0, 37.0 -0.28
CC009/UncJ f 131.5 136.5   2   96.5 1.0378 35.0, 228.0 1.34
CC009/UncJ m 78.5 44.548   2   31.5 0.5675 47.0, 110.0 0.43
CC011/UncJ f 16.0 82.53   3 47.648 5.158 -54.0, 107.0 -0.38
CC011/UncJ m 162.3 158.0   3 91.22 0.9733 25.0, 335.0 1.87
CC012/GeniUncJ f 84.33 14.978   3 8.6474 0.1776 72.0, 101.0 0.64
CC012/GeniUncJ m -51.0 0.0   1   0.0 0.0 -51.0, -51.0 -1.8
CC013/GeniUncJ f -32.5 24.749   2   17.5 -0.7615 -50.0, -15.0 -1.1
CC013/GeniUncJ m 59.5 0.70711   2   0.5 0.0119 59.0, 60.0 0.1
CC015/UncJ f 16.0 0.0   1   0.0 0.0 16.0, 16.0 -0.38
CC015/UncJ m -15.0 0.0   1   0.0 0.0 -15.0, -15.0 -1.18
CC016/GeniUncJ f 72.67 18.824   3 10.868 0.259 51.0, 85.0 0.46
CC016/GeniUncJ m 41.0 40.947   4 20.474 0.9987 2.0, 95.0 -0.22
CC017/UncJ f 101.5 65.76   2   46.5 0.6479 55.0, 148.0 0.89
CC017/UncJ m 71.33 30.006   3 17.324 0.4206 45.0, 104.0 0.31
CC018/UncJ f 159.7 78.05   3 45.064 0.4889 71.0, 218.0 1.76
CC018/UncJ m 60.5 71.42   2   50.5 1.1805 10.0, 111.0 0.12
CC019/TauUncJ f 94.5 154.0   4 77.02 1.6301 -77.0, 295.0 0.79
CC019/TauUncJ m 80.0 46.267   4 23.134 0.5783 15.0, 124.0 0.46
CC023/GeniUncJ f -7.5 72.83   2   51.5 -9.7109 -59.0, 44.0 -0.73
CC023/GeniUncJ m -96.0 0.0   1   0.0 0.0 -96.0, -96.0 -2.57
CC025/GeniUncJ f -6.0 25.159   3 14.526 -4.1932 -35.0, 10.0 -0.71
CC025/GeniUncJ m 46.333 2.0817   3 1.2019 0.0449 44.0, 48.0 -0.12
CC026/GeniUncJ f 127.0 0.0   1   0.0 0.0 127.0, 127.0 1.27
CC026/GeniUncJ m 82.0 97.58   2   69.0 1.19 13.0, 151.0 0.49
CC027/GeniUncJ f 92.5 91.22   2   64.5 0.9861 28.0, 157.0 0.76
CC027/GeniUncJ m 89.25 81.78   4 40.891 0.9163 5.0, 186.0 0.62
CC028/GeniUncJ f -54.67 205.1   3 118.4 -3.7521 -271.0, 137.0 -1.43
CC028/GeniUncJ m -27.333 153.9   3 88.84 -5.6294 -205.0, 63.0 -1.39
CC029/UncJ f -72.0 0.0   1   0.0 0.0 -72.0, -72.0 -1.69
CC029/UncJ m -4.0 0.0   1   0.0 0.0 -4.0, -4.0 -0.99
CC030/GeniUncJ f -7.0 19.799   2   14.0 -2.8284 -21.0, 7.0 -0.72
CC030/GeniUncJ m 51.0 84.85   2   60.0 1.6638 -9.0, 111.0 -0.04
CC032/GeniUncJ f 62.0 66.47   2   47.0 1.0721 15.0, 109.0 0.3
CC033/GeniUncJ f -46.0 49.497   2   35.0 -1.076 -81.0, -11.0 -1.31
CC033/GeniUncJ m 4.0 14.142   2   10.0 3.5355 -6.0, 14.0 -0.85
CC035/UncJ m 85.0 0.0   1   0.0 0.0 85.0, 85.0 0.54
CC036/UncJ f -28.667 2.3094   3 1.3333 -0.0806 -30.0, -26.0 -1.05
CC036/UncJ m 11.0 20.809   3 12.014 1.8917 -13.0, 24.0 -0.73
CC037/TauUncJ f 38.5 14.849   2   10.5 0.3857 28.0, 49.0 -0.05
CC037/TauUncJ m 31.667 31.021   3 17.91 0.9796 -0.38
CC040/TauUncJ f 37.0 48.539   3 28.024 1.3119 -17.0, 77.0 -0.07
CC040/TauUncJ m 141.3 101.6   3 58.64 0.7187 42.0, 245.0 1.51
CC041/TauUncJ f 23.0 23.431   3 13.528 1.0187 8.0, 50.0 -0.28
CC041/TauUncJ m 24.5 70.0   2   49.5 2.8573 -25.0, 74.0 -0.5
CC043/GeniUncJ f 77.0 110.3   2   78.0 1.4326 -1.0, 155.0 0.53
CC043/GeniUncJ m 49.0 97.58   2   69.0 1.9914 -20.0, 118.0 -0.08
CC044/UncJ f 151.0 0.0   1   0.0 0.0 151.0, 151.0 1.63
CC051/TauUncJ f 32.0 0.0   1   0.0 0.0 32.0, 32.0 -0.14
CC051/TauUncJ m 154.0 0.0   1   0.0 0.0 154.0, 154.0 1.73
CC057/UncJ f 40.5 17.678   2   12.5 0.4365 28.0, 53.0 -0.02
CC057/UncJ m 22.5 17.678   2   12.5 0.7857 10.0, 35.0 -0.53
CC059/TauUncJ f 41.25 81.18   4 40.588 1.9679 -19.0, 157.0 0.0
CC059/TauUncJ m 67.0 190.9   5 85.37 2.8491 -219.0, 286.0 0.23
CC060/UncJ f 78.0 0.0   1   0.0 0.0 78.0, 78.0 0.54
CC060/UncJ m 8.0 0.0   1   0.0 0.0 8.0, 8.0 -0.78
CC061/GeniUncJ f -107.0 158.8   3 91.66 -1.4838 -208.0, 76.0 -2.21
CC061/GeniUncJ m 129.5 119.5   2   84.5 0.9228 45.0, 214.0 1.31
CC074/UncJ f 80.0 0.0   1   0.0 0.0 80.0, 80.0 0.57
CC074/UncJ m 70.0 0.0   1   0.0 0.0 70.0, 70.0 0.28
CC075/UncJ f 69.0 33.941   2   24.0 0.4919 45.0, 93.0 0.41
CC075/UncJ m 37.0 0.0   1   0.0 0.0 37.0, 37.0 -0.28
CC078/TauUncJ f 27.0 32.696   3 18.877 1.2109 2.0, 64.0 -0.22
CC078/TauUncJ m 55.33 67.28   3 38.843 1.2159 -21.0, 106.0 0.03
CC079/TauUncJ f 35.0 0.0   1   0.0 0.0 35.0, 35.0 -0.1
CC079/TauUncJ m -13.0 18.385   2   13.0 -1.4142 -26.0, 0.0 -1.15
CC080/TauUncJ f 36.5 40.305   2   28.5 1.1042 8.0, 65.0 -0.08
CC080/TauUncJ m 168.0 0.0   1   0.0 0.0 168.0, 168.0 1.97
CC084/TauJ f 105.5 327.4   2   231.5 3.1032 -126.0, 337.0 0.95
CC084/TauJ m -44.0 94.75   2   67.0 -2.1535 -111.0, 23.0 -1.68
NOD/ShiLtJ f 31.375 50.03   8 17.688 1.5945 -20.0, 127.0 -0.15
NOD/ShiLtJ m 52.36 62.89   11 18.963 1.2011 -78.0, 145.0 -0.02
NZO/HlLtJ f 61.0 14.731   3 8.5049 0.2415 45.0, 74.0 0.29
NZO/HlLtJ m 53.0 22.627   2   16.0 0.4269 37.0, 69.0 -0.01
PWK/PhJ f 100.0 108.4   9 36.147 1.0844 4.0, 377.0 0.87
PWK/PhJ m 74.12 128.8   8 45.553 1.7382 -97.0, 307.0 0.36
WSB/EiJ f 27.5 45.217   8 15.987 1.6443 -30.0, 94.0 -0.21
WSB/EiJ m 54.5 40.752   6 16.637 0.7477 15.0, 121.0 0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f -7.6666666667 51.6681692428 94.2434490605 -109.5767823939
129S1/SvImJ m 57.75 44.7459471313 146.0067491224 -30.5067491224
A/J f 37.8333333333 36.5349128431 109.8946672355 -34.2280005689
A/J m -18.0 40.0219918013 60.9392362043 -96.9392362043
C57BL/6J f 53.0714285714 23.9177148017 100.2466453266 5.8962118162
C57BL/6J m 78.5454545455 26.9828213679 131.7662767374 25.3246323536
CAST/EiJ f 29.6 28.2998217993 85.4184692218 -26.2184692218
CAST/EiJ m 62.5 31.6401626472 124.9069457899 0.0930542101
CC001/UncJ f 82.0 51.6681692428 183.9101157272 -19.9101157272
CC001/UncJ m 36.5 63.2803252943 161.3138915798 -88.3138915798
CC002/UncJ f 68.75 44.7459471313 157.0067491224 -19.5067491224
CC002/UncJ m 69.75 44.7459471313 158.0067491224 -18.5067491224
CC003/UncJ f 245.0 63.2803252943 369.8138915798 120.1861084202
CC003/UncJ m 85.0 51.6681692428 186.9101157272 -16.9101157272
CC005/TauUncJ f 2.0 51.6681692428 103.9101157272 -99.9101157272
CC005/TauUncJ m 68.0 63.2803252943 192.8138915798 -56.8138915798
CC006/TauUncJ f -28.0 63.2803252943 96.8138915798 -152.8138915798
CC006/TauUncJ m 58.0 63.2803252943 182.8138915798 -66.8138915798
CC009/UncJ f 131.5 63.2803252943 256.3138915798 6.6861084202
CC009/UncJ m 78.5 63.2803252943 203.3138915798 -46.3138915798
CC011/UncJ f 16.0 51.6681692428 117.9101157272 -85.9101157272
CC011/UncJ m 162.3333333333 51.6681692428 264.2434490605 60.4232176061
CC013/GeniUncJ f -32.5 63.2803252943 92.3138915798 -157.3138915798
CC013/GeniUncJ m 59.5 63.2803252943 184.3138915798 -65.3138915798
CC016/GeniUncJ f 72.6666666667 51.6681692428 174.5767823939 -29.2434490605
CC016/GeniUncJ m 41.0 44.7459471313 129.2567491224 -47.2567491224
CC017/UncJ f 101.5 63.2803252943 226.3138915798 -23.3138915798
CC017/UncJ m 71.3333333333 51.6681692428 173.2434490605 -30.5767823939
CC018/UncJ f 159.6666666667 51.6681692428 261.5767823939 57.7565509395
CC018/UncJ m 60.5 63.2803252943 185.3138915798 -64.3138915798
CC019/TauUncJ f 94.5 44.7459471313 182.7567491224 6.2432508776
CC019/TauUncJ m 80.0 44.7459471313 168.2567491224 -8.2567491224
CC025/GeniUncJ f -6.0 51.6681692428 95.9101157272 -107.9101157272
CC025/GeniUncJ m 46.3333333333 51.6681692428 148.2434490605 -55.5767823939
CC027/GeniUncJ f 92.5 63.2803252943 217.3138915798 -32.3138915798
CC027/GeniUncJ m 89.25 44.7459471313 177.5067491224 0.9932508776
CC028/GeniUncJ f -54.6666666667 51.6681692428 47.2434490605 -156.5767823939
CC028/GeniUncJ m -27.3333333333 51.6681692428 74.5767823939 -129.2434490605
CC030/GeniUncJ f -7.0 63.2803252943 117.8138915798 -131.8138915798
CC030/GeniUncJ m 51.0 63.2803252943 175.8138915798 -73.8138915798
CC033/GeniUncJ f -46.0 63.2803252943 78.8138915798 -170.8138915798
CC033/GeniUncJ m 4.0 63.2803252943 128.8138915798 -120.8138915798
CC036/UncJ f -28.6666666667 51.6681692428 73.2434490605 -130.5767823939
CC036/UncJ m 11.0 51.6681692428 112.9101157272 -90.9101157272
CC037/TauUncJ f 38.5 63.2803252943 163.3138915798 -86.3138915798
CC037/TauUncJ m 31.6666666667 51.6681692428 133.5767823939 -70.2434490605
CC040/TauUncJ f 37.0 51.6681692428 138.9101157272 -64.9101157272
CC040/TauUncJ m 141.3333333333 51.6681692428 243.2434490605 39.4232176061
CC041/TauUncJ f 23.0 51.6681692428 124.9101157272 -78.9101157272
CC041/TauUncJ m 24.5 63.2803252943 149.3138915798 -100.3138915798
CC043/GeniUncJ f 77.0 63.2803252943 201.8138915798 -47.8138915798
CC043/GeniUncJ m 49.0 63.2803252943 173.8138915798 -75.8138915798
CC057/UncJ f 40.5 63.2803252943 165.3138915798 -84.3138915798
CC057/UncJ m 22.5 63.2803252943 147.3138915798 -102.3138915798
CC059/TauUncJ f 41.25 44.7459471313 129.5067491224 -47.0067491224
CC059/TauUncJ m 67.0 40.0219918013 145.9392362043 -11.9392362043
CC061/GeniUncJ f -107.0 51.6681692428 -5.0898842728 -208.9101157272
CC061/GeniUncJ m 129.5 63.2803252943 254.3138915798 4.6861084202
CC078/TauUncJ f 27.0 51.6681692428 128.9101157272 -74.9101157272
CC078/TauUncJ m 55.3333333333 51.6681692428 157.2434490605 -46.5767823939
CC084/TauJ f 105.5 63.2803252943 230.3138915798 -19.3138915798
CC084/TauJ m -44.0 63.2803252943 80.8138915798 -168.8138915798
NOD/ShiLtJ f 31.375 31.6401626472 93.7819457899 -31.0319457899
NOD/ShiLtJ m 52.3636363636 26.9828213679 105.5844585555 -0.8571858283
NZO/HlLtJ f 61.0 51.6681692428 162.9101157272 -40.9101157272
NZO/HlLtJ m 53.0 63.2803252943 177.8138915798 -71.8138915798
PWK/PhJ f 100.0 29.8306314209 158.8378327482 41.1621672518
PWK/PhJ m 74.125 31.6401626472 136.5319457899 11.7180542101
WSB/EiJ f 27.5 31.6401626472 89.9069457899 -34.9069457899
WSB/EiJ m 54.5 36.5349128431 126.5613339022 -17.5613339022


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.0416666667 34.1752816286 92.4488722407 -42.3655389073
A/J both 9.9166666667 27.0950165353 63.358782213 -43.5254488797
C57BL/6J both 65.8084415584 18.0286558727 101.368099145 30.2487839719
CAST/EiJ both 46.05 21.2248663495 87.9138519163 4.1861480837
CC001/UncJ both 59.25 40.8472743346 139.8170205773 -21.3170205773
CC002/UncJ both 69.25 31.6401626472 131.6569457899 6.8430542101
CC003/UncJ both 165.0 40.8472743346 245.5670205773 84.4329794227
CC005/TauUncJ both 35.0 40.8472743346 115.5670205773 -45.5670205773
CC006/TauUncJ both 15.0 44.7459471313 103.2567491224 -73.2567491224
CC009/UncJ both 105.0 44.7459471313 193.2567491224 16.7432508776
CC011/UncJ both 89.1666666667 36.5349128431 161.2280005689 17.1053327645
CC013/GeniUncJ both 13.5 44.7459471313 101.7567491224 -74.7567491224
CC016/GeniUncJ both 56.8333333333 34.1752816286 124.2405389073 -10.5738722407
CC017/UncJ both 86.4166666667 40.8472743346 166.983687244 5.8496460893
CC018/UncJ both 110.0833333333 40.8472743346 190.6503539107 29.516312756
CC019/TauUncJ both 87.25 31.6401626472 149.6569457899 24.8430542101
CC025/GeniUncJ both 20.1666666667 36.5349128431 92.2280005689 -51.8946672355
CC027/GeniUncJ both 90.875 38.7511269321 167.3075867954 14.4424132046
CC028/GeniUncJ both -41.0 36.5349128431 31.0613339022 -113.0613339022
CC030/GeniUncJ both 22.0 44.7459471313 110.2567491224 -66.2567491224
CC033/GeniUncJ both -21.0 44.7459471313 67.2567491224 -109.2567491224
CC036/UncJ both -8.8333333333 36.5349128431 63.2280005689 -80.8946672355
CC037/TauUncJ both 35.0833333333 40.8472743346 115.6503539107 -45.483687244
CC040/TauUncJ both 89.1666666667 36.5349128431 161.2280005689 17.1053327645
CC041/TauUncJ both 23.75 40.8472743346 104.3170205773 -56.8170205773
CC043/GeniUncJ both 63.0 44.7459471313 151.2567491224 -25.2567491224
CC057/UncJ both 31.5 44.7459471313 119.7567491224 -56.7567491224
CC059/TauUncJ both 54.125 30.016493851 113.3294271532 -5.0794271532
CC061/GeniUncJ both 11.25 40.8472743346 91.8170205773 -69.3170205773
CC078/TauUncJ both 41.1666666667 36.5349128431 113.2280005689 -30.8946672355
CC084/TauJ both 30.75 44.7459471313 119.0067491224 -57.5067491224
NOD/ShiLtJ both 41.8693181818 20.791660235 82.878715878 0.8599204857
NZO/HlLtJ both 57.0 40.8472743346 137.5670205773 -23.5670205773
PWK/PhJ both 87.0625 21.742622101 129.947571544 44.177428456
WSB/EiJ both 41.0 24.1655733886 88.6640921622 -6.6640921622




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA