Project measure / variable:   Graham3   mem_CD4_pos_CD62L_neg

ID, description, units MPD:113832   mem_CD4_pos_CD62L_neg   percentage of splenic CD4+ T cells that are CD62L- (memory panel)   [%]  
Data set, strains Graham3   CC RIX   68 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic CD4+ T cells that are CD62L- (memory panel)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested68 strains
Mean of the strain means33.345   %
Median of the strain means27.559   %
SD of the strain means± 20.399
Coefficient of variation (CV)0.6118
Min–max range of strain means0.34733   –   91.7   %
Mean sample size per strain3.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 67 83579.8761 1247.4608 4.9775 < 0.0001
Residuals 141 35337.6242 250.6214


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) m 15.47 9.2605   3 5.3466 0.5986 6.91, 25.3 -0.88
RIX:CC(002 x 021) m 49.8 18.003   3 10.394 0.3615 34.0, 69.4 0.81
RIX:CC(005 x 038) m 37.0 30.762   3 17.76 0.8314 18.2, 72.5 0.18
RIX:CC(005 x 040) m 18.9 3.0512   3 1.7616 0.1614 15.8, 21.9 -0.71
RIX:CC(006 x 007) m 37.033 7.8034   3 4.5053 0.2107 29.1, 44.7 0.18
RIX:CC(006 x 039) m 17.667 2.1733   3 1.2548 0.123 15.2, 19.3 -0.77
RIX:CC(007 x 070) m 14.197 14.661   3 8.4644 1.0327 4.94, 31.1 -0.94
RIX:CC(007 x 075) m 91.67 1.1846   3 0.68394 0.0129 90.3, 92.4 2.86
RIX:CC(008 x 009) m 17.467 5.0362   3 2.9077 0.2883 13.4, 23.1 -0.78
RIX:CC(008 x 010) m 80.3 6.9477   3 4.0112 0.0865 72.6, 86.1 2.3
RIX:CC(008 x 018) m 34.933 2.7502   3 1.5878 0.0787 32.2, 37.7 0.08
RIX:CC(010 x 015) m 0.34733 0.05341   3 0.03083 0.1538 0.316, 0.409 -1.62
RIX:CC(012 x 038) m 27.6 6.9936   3 4.0377 0.2534 22.2, 35.5 -0.28
RIX:CC(013 x 041) m 27.517 3.227   6 1.3174 0.1173 23.7, 32.0 -0.29
RIX:CC(014 x 059) m 33.533 19.989   3 11.54 0.5961 14.3, 54.2 0.01
RIX:CC(015 x 018) m 16.567 0.66583   3 0.38442 0.0402 15.8, 17.0 -0.82
RIX:CC(015 x 059) m 19.4 3.593   3 2.0744 0.1852 16.8, 23.5 -0.68
RIX:CC(016 x 038) m 44.933 32.571   3 18.805 0.7249 14.1, 79.0 0.57
RIX:CC(019 x 002) m 16.467 3.0665   3 1.7704 0.1862 13.6, 19.7 -0.83
RIX:CC(019 x 004) m 21.467 11.813   3 6.8201 0.5503 12.7, 34.9 -0.58
RIX:CC(019 x 027) m 48.533 37.819   3 21.835 0.7792 26.3, 92.2 0.74
RIX:CC(022 x 024) m 74.73 18.8   3 10.854 0.2516 56.0, 93.6 2.03
RIX:CC(022 x 044) m 14.533 5.5085   3 3.1803 0.379 10.1, 20.7 -0.92
RIX:CC(024 x 052) m 54.63 34.656   3 20.009 0.6343 19.6, 88.9 1.04
RIX:CC(025 x 028) m 47.333 19.592   3 11.311 0.4139 25.4, 63.1 0.69
RIX:CC(026 x 034) m 48.0 34.557   3 19.952 0.7199 27.6, 87.9 0.72
RIX:CC(027 x 045) m 15.2 0.43589   3 0.25166 0.0287 14.7, 15.5 -0.89
RIX:CC(029 x 027) m 56.3 24.939   3 14.399 0.443 27.6, 72.7 1.13
RIX:CC(029 x 071) m 21.6 1.6371   3 0.94516 0.0758 19.8, 23.0 -0.58
RIX:CC(030 x 023) m 54.6 29.535   3 17.052 0.5409 29.4, 87.1 1.04
RIX:CC(030 x 061) m 26.1 6.844   3 3.9514 0.2622 21.1, 33.9 -0.36
RIX:CC(033 x 046) m 38.517 16.782   6 6.8511 0.4357 20.0, 66.3 0.25
RIX:CC(033 x 068) m 91.7 2.0664   3 1.193 0.0225 89.8, 93.9 2.86
RIX:CC(035 x 071) m 16.1 0.60828   3 0.35119 0.0378 15.4, 16.5 -0.85
RIX:CC(037 x 046) m 19.033 4.0004   3 2.3096 0.2102 15.0, 23.0 -0.7
RIX:CC(037 x 057) m 14.8 1.7   3 0.9815 0.1149 13.1, 16.5 -0.91
RIX:CC(038 x 013) m 31.533 7.772   3 4.4871 0.2465 25.9, 40.4 -0.09
RIX:CC(039 x 020) m 57.13 20.779   3 11.997 0.3637 42.4, 80.9 1.17
RIX:CC(040 x 003) m 34.733 10.991   3 6.3457 0.3164 22.1, 42.1 0.07
RIX:CC(040 x 015) m 14.567 0.40415   3 0.23333 0.0277 14.1, 14.8 -0.92
RIX:CC(041 x 016) m 36.1 25.248   3 14.577 0.6994 16.9, 64.7 0.14
RIX:CC(042 x 019) m 31.833 27.375   3 15.805 0.8599 13.5, 63.3 -0.07
RIX:CC(043 x 033) m 25.433 8.0649   3 4.6563 0.3171 20.0, 34.7 -0.39
RIX:CC(043 x 037) m 24.633 1.701   3 0.98206 0.0691 22.9, 26.3 -0.43
RIX:CC(044 x 060) m 19.533 3.7978   3 2.1927 0.1944 17.0, 23.9 -0.68
RIX:CC(045 x 044) m 31.933 14.434   3 8.3333 0.452 23.6, 48.6 -0.07
RIX:CC(046 x 068) m 30.0 6.2233   3 3.593 0.2074 24.4, 36.7 -0.16
RIX:CC(052 x 014) m 17.75 3.6062   2   2.55 0.2032 15.2, 20.3 -0.76
RIX:CC(057 x 052) m 7.7867 1.3725   3 0.79241 0.1763 6.32, 9.04 -1.25
RIX:CC(058 x 022) m 9.6533 7.3372   3 4.2361 0.7601 4.86, 18.1 -1.16
RIX:CC(059 x 065) m 20.1 1.4731   3 0.85049 0.0733 18.8, 21.7 -0.65
RIX:CC(060 x 037) m 9.3533 0.84008   3 0.48502 0.0898 8.52, 10.2 -1.18
RIX:CC(061 x 025) m 14.967 1.7786   3 1.0269 0.1188 13.4, 16.9 -0.9
RIX:CC(061 x 039) m 30.867 15.112   3 8.7247 0.4896 14.4, 44.1 -0.12
RIX:CC(062 x 046) m 25.167 2.9956   3 1.7295 0.119 22.7, 28.5 -0.4
RIX:CC(062 x 072) m 72.0 26.086   3 15.061 0.3623 42.7, 92.7 1.89
RIX:CC(063 x 001) m 55.43 6.9587   3 4.0176 0.1255 47.4, 59.6 1.08
RIX:CC(063 x 002) m 21.367 2.3544   3 1.3593 0.1102 19.1, 23.8 -0.59
RIX:CC(065 x 072) m 20.933 5.7003   3 3.2911 0.2723 15.2, 26.6 -0.61
RIX:CC(068 x 035) m 69.77 17.065   3 9.8526 0.2446 52.3, 86.4 1.79
RIX:CC(068 x 043) m 46.4 14.66   3 8.4642 0.316 37.1, 63.3 0.64
RIX:CC(070 x 003) m 19.6 1.7776   3 1.0263 0.0907 17.6, 21.0 -0.67
RIX:CC(072 x 063) m 54.87 28.697   3 16.568 0.523 22.5, 77.2 1.06
RIX:CC(072 x 075) m 38.367 3.6116   3 2.0851 0.0941 35.2, 42.3 0.25
RIX:CC(074 x 058) m 32.933 34.008   3 19.635 1.0326 12.9, 72.2 -0.02
RIX:CC(074 x 062) m 21.133 8.4109   3 4.856 0.398 12.2, 28.9 -0.6
RIX:CC(075 x 021) m 17.667 1.7786   3 1.0269 0.1007 16.1, 19.6 -0.77
RIX:CC(075 x 035) m 59.93 37.41   3 21.599 0.6242 17.1, 86.2 1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 15.47 9.1400482862 33.5392492647 -2.5992492647
RIX:CC(002 x 021) m 49.8 9.1400482862 67.8692492647 31.7307507353
RIX:CC(005 x 038) m 37.0 9.1400482862 55.0692492647 18.9307507353
RIX:CC(005 x 040) m 18.9 9.1400482862 36.9692492647 0.8307507353
RIX:CC(006 x 007) m 37.0333333333 9.1400482862 55.102582598 18.9640840687
RIX:CC(006 x 039) m 17.6666666667 9.1400482862 35.7359159313 -0.402582598
RIX:CC(007 x 070) m 14.1966666667 9.1400482862 32.2659159313 -3.872582598
RIX:CC(007 x 075) m 91.6666666667 9.1400482862 109.7359159313 73.597417402
RIX:CC(008 x 009) m 17.4666666667 9.1400482862 35.5359159313 -0.602582598
RIX:CC(008 x 010) m 80.3 9.1400482862 98.3692492647 62.2307507353
RIX:CC(008 x 018) m 34.9333333333 9.1400482862 53.002582598 16.8640840687
RIX:CC(010 x 015) m 0.3473333333 9.1400482862 18.416582598 -17.7219159313
RIX:CC(012 x 038) m 27.6 9.1400482862 45.6692492647 9.5307507353
RIX:CC(013 x 041) m 27.5166666667 6.4629901236 40.2935553527 14.7397779807
RIX:CC(014 x 059) m 33.5333333333 9.1400482862 51.602582598 15.4640840687
RIX:CC(015 x 018) m 16.5666666667 9.1400482862 34.6359159313 -1.502582598
RIX:CC(015 x 059) m 19.4 9.1400482862 37.4692492647 1.3307507353
RIX:CC(016 x 038) m 44.9333333333 9.1400482862 63.002582598 26.8640840687
RIX:CC(019 x 002) m 16.4666666667 9.1400482862 34.5359159313 -1.602582598
RIX:CC(019 x 004) m 21.4666666667 9.1400482862 39.5359159313 3.397417402
RIX:CC(019 x 027) m 48.5333333333 9.1400482862 66.602582598 30.4640840687
RIX:CC(022 x 024) m 74.7333333333 9.1400482862 92.802582598 56.6640840687
RIX:CC(022 x 044) m 14.5333333333 9.1400482862 32.602582598 -3.5359159313
RIX:CC(024 x 052) m 54.6333333333 9.1400482862 72.702582598 36.5640840687
RIX:CC(025 x 028) m 47.3333333333 9.1400482862 65.402582598 29.2640840687
RIX:CC(026 x 034) m 48.0 9.1400482862 66.0692492647 29.9307507353
RIX:CC(027 x 045) m 15.2 9.1400482862 33.2692492647 -2.8692492647
RIX:CC(029 x 027) m 56.3 9.1400482862 74.3692492647 38.2307507353
RIX:CC(029 x 071) m 21.6 9.1400482862 39.6692492647 3.5307507353
RIX:CC(030 x 023) m 54.6 9.1400482862 72.6692492647 36.5307507353
RIX:CC(030 x 061) m 26.1 9.1400482862 44.1692492647 8.0307507353
RIX:CC(033 x 046) m 38.5166666667 6.4629901236 51.2935553527 25.7397779807
RIX:CC(033 x 068) m 91.7 9.1400482862 109.7692492647 73.6307507353
RIX:CC(035 x 071) m 16.1 9.1400482862 34.1692492647 -1.9692492647
RIX:CC(037 x 046) m 19.0333333333 9.1400482862 37.102582598 0.9640840687
RIX:CC(037 x 057) m 14.8 9.1400482862 32.8692492647 -3.2692492647
RIX:CC(038 x 013) m 31.5333333333 9.1400482862 49.602582598 13.4640840687
RIX:CC(039 x 020) m 57.1333333333 9.1400482862 75.202582598 39.0640840687
RIX:CC(040 x 003) m 34.7333333333 9.1400482862 52.802582598 16.6640840687
RIX:CC(040 x 015) m 14.5666666667 9.1400482862 32.6359159313 -3.502582598
RIX:CC(041 x 016) m 36.1 9.1400482862 54.1692492647 18.0307507353
RIX:CC(042 x 019) m 31.8333333333 9.1400482862 49.902582598 13.7640840687
RIX:CC(043 x 033) m 25.4333333333 9.1400482862 43.502582598 7.3640840687
RIX:CC(043 x 037) m 24.6333333333 9.1400482862 42.702582598 6.5640840687
RIX:CC(044 x 060) m 19.5333333333 9.1400482862 37.602582598 1.4640840687
RIX:CC(045 x 044) m 31.9333333333 9.1400482862 50.002582598 13.8640840687
RIX:CC(046 x 068) m 30.0 9.1400482862 48.0692492647 11.9307507353
RIX:CC(052 x 014) m 17.75 11.1942272628 39.8802203668 -4.3802203668
RIX:CC(057 x 052) m 7.7866666667 9.1400482862 25.8559159313 -10.282582598
RIX:CC(058 x 022) m 9.6533333333 9.1400482862 27.722582598 -8.4159159313
RIX:CC(059 x 065) m 20.1 9.1400482862 38.1692492647 2.0307507353
RIX:CC(060 x 037) m 9.3533333333 9.1400482862 27.422582598 -8.7159159313
RIX:CC(061 x 025) m 14.9666666667 9.1400482862 33.0359159313 -3.102582598
RIX:CC(061 x 039) m 30.8666666667 9.1400482862 48.9359159313 12.797417402
RIX:CC(062 x 046) m 25.1666666667 9.1400482862 43.2359159313 7.097417402
RIX:CC(062 x 072) m 72.0 9.1400482862 90.0692492647 53.9307507353
RIX:CC(063 x 001) m 55.4333333333 9.1400482862 73.502582598 37.3640840687
RIX:CC(063 x 002) m 21.3666666667 9.1400482862 39.4359159313 3.297417402
RIX:CC(065 x 072) m 20.9333333333 9.1400482862 39.002582598 2.8640840687
RIX:CC(068 x 035) m 69.7666666667 9.1400482862 87.8359159313 51.697417402
RIX:CC(068 x 043) m 46.4 9.1400482862 64.4692492647 28.3307507353
RIX:CC(070 x 003) m 19.6 9.1400482862 37.6692492647 1.5307507353
RIX:CC(072 x 063) m 54.8666666667 9.1400482862 72.9359159313 36.797417402
RIX:CC(072 x 075) m 38.3666666667 9.1400482862 56.4359159313 20.297417402
RIX:CC(074 x 058) m 32.9333333333 9.1400482862 51.002582598 14.8640840687
RIX:CC(074 x 062) m 21.1333333333 9.1400482862 39.202582598 3.0640840687
RIX:CC(075 x 021) m 17.6666666667 9.1400482862 35.7359159313 -0.402582598
RIX:CC(075 x 035) m 59.9333333333 9.1400482862 78.002582598 41.8640840687




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA