Project measure / variable:   Graham3   mem_CD3_pos

ID, description, units MPD:113825   mem_CD3_pos   percentage of splenic lymphocytes that are CD3+ T cells (memory panel)   [%]  
Data set, strains Graham3   CC RIX   68 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic lymphocytes that are CD3+ T cells (memory panel)

RIX:CC(024 x 052)RIX:CC(033 x 046)RIX:CC(057 x 052)RIX:CC(063 x 001)RIX:CC(061 x 025)RIX:CC(052 x 014)RIX:CC(010 x 015)RIX:CC(037 x 057)RIX:CC(014 x 059)RIX:CC(037 x 046)RIX:CC(003 x 062)RIX:CC(015 x 059)RIX:CC(043 x 037)RIX:CC(027 x 045)RIX:CC(015 x 018)RIX:CC(045 x 044)RIX:CC(012 x 038)RIX:CC(008 x 018)RIX:CC(070 x 003)RIX:CC(061 x 039)RIX:CC(019 x 004)RIX:CC(060 x 006)RIX:CC(007 x 070)RIX:CC(060 x 037)RIX:CC(022 x 024)RIX:CC(043 x 033)RIX:CC(002 x 021)RIX:CC(001 x 055)RIX:CC(075 x 021)RIX:CC(058 x 022)RIX:CC(038 x 013)RIX:CC(040 x 015)RIX:CC(016 x 038)RIX:CC(019 x 002)RIX:CC(044 x 060)RIX:CC(019 x 027)RIX:CC(030 x 061)RIX:CC(062 x 046)RIX:CC(029 x 071)RIX:CC(040 x 003)RIX:CC(023 x 025)RIX:CC(063 x 002)RIX:CC(055 x 028)RIX:CC(041 x 016)RIX:CC(013 x 041)RIX:CC(068 x 043)RIX:CC(072 x 075)RIX:CC(005 x 038)RIX:CC(074 x 062)RIX:CC(022 x 044)RIX:CC(051 x 009)RIX:CC(046 x 068)RIX:CC(030 x 023)RIX:CC(074 x 058)RIX:CC(062 x 072)RIX:CC(005 x 040)RIX:CC(068 x 035)RIX:CC(029 x 027)RIX:CC(026 x 034)RIX:CC(035 x 071)RIX:CC(008 x 010)RIX:CC(042 x 019)RIX:CC(072 x 063)RIX:CC(008 x 009)RIX:CC(075 x 035)RIX:CC(006 x 039)RIX:CC(025 x 028)RIX:CC(065 x 072) % 0102030405060708090100femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested68 strains
Mean of the strain means35.407   %
Median of the strain means34.617   %
SD of the strain means± 12.251
Coefficient of variation (CV)0.346
Min–max range of strain means16.633   –   100.0   %
Mean sample size per strain3.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 67 33192.2528 495.4068 7.0702 < 0.0001
Residuals 141 9879.8233 70.0697


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 68 (68)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
RIX:CC(001 x 055) m 36.867 5.5302   3 3.1929 0.15 31.7, 42.7 0.12
RIX:CC(002 x 021) m 37.167 4.6069   3 2.6598 0.124 32.2, 41.3 0.14
RIX:CC(003 x 062) m 43.867 1.5144   3 0.87433 0.0345 42.8, 45.6 0.69
RIX:CC(005 x 038) m 29.967 2.4502   3 1.4146 0.0818 27.5, 32.4 -0.44
RIX:CC(005 x 040) m 26.4 0.5   3 0.28868 0.0189 25.9, 26.9 -0.74
RIX:CC(006 x 039) m 16.933 1.5177   3 0.87623 0.0896 15.3, 18.3 -1.51
RIX:CC(007 x 070) m 38.6 7.1582   3 4.1328 0.1854 30.4, 43.6 0.26
RIX:CC(008 x 009) m 20.167 0.77675   3 0.44845 0.0385 19.3, 20.8 -1.24
RIX:CC(008 x 010) m 23.4 12.003   3 6.9299 0.5129 10.8, 34.7 -0.98
RIX:CC(008 x 018) m 39.833 2.3352   3 1.3482 0.0586 37.3, 41.9 0.36
RIX:CC(010 x 015) m 47.067 1.9655   3 1.1348 0.0418 44.8, 48.3 0.95
RIX:CC(012 x 038) m 40.567 4.5347   3 2.6181 0.1118 36.8, 45.6 0.42
RIX:CC(013 x 041) m 30.633 2.3864   6 0.97422 0.0779 28.1, 33.6 -0.39
RIX:CC(014 x 059) m 46.0 6.063   3 3.5005 0.1318 39.0, 49.6 0.86
RIX:CC(015 x 018) m 42.733 4.5501   3 2.627 0.1065 38.2, 47.3 0.6
RIX:CC(015 x 059) m 43.567 3.5921   3 2.0739 0.0825 39.6, 46.6 0.67
RIX:CC(016 x 038) m 34.7 14.351   3 8.2857 0.4136 19.7, 48.3 -0.06
RIX:CC(019 x 002) m 34.7 0.60828   3 0.35119 0.0175 34.3, 35.4 -0.06
RIX:CC(019 x 004) m 38.767 5.8484   3 3.3766 0.1509 32.4, 43.9 0.27
RIX:CC(019 x 027) m 33.6 1.8028   3 1.0408 0.0537 31.6, 35.1 -0.15
RIX:CC(022 x 024) m 38.0 1.5875   3 0.91652 0.0418 36.8, 39.8 0.21
RIX:CC(022 x 044) m 29.533 7.697   3 4.4438 0.2606 20.7, 34.8 -0.48
RIX:CC(023 x 025) m 31.967 3.6019   3 2.0795 0.1127 28.3, 35.5 -0.28
RIX:CC(024 x 052) m 100.0 0.0   3 0.0 0.0 100.0, 100.0 5.27
RIX:CC(025 x 028) m 16.767 2.761   3 1.5941 0.1647 14.4, 19.8 -1.52
RIX:CC(026 x 034) m 24.967 3.0436   3 1.7572 0.1219 21.5, 27.2 -0.85
RIX:CC(027 x 045) m 42.733 4.1645   3 2.4044 0.0975 39.8, 47.5 0.6
RIX:CC(029 x 027) m 25.233 14.55   3 8.4005 0.5766 10.7, 39.8 -0.83
RIX:CC(029 x 071) m 32.733 3.0827   3 1.7798 0.0942 30.3, 36.2 -0.22
RIX:CC(030 x 023) m 28.9 7.1861   3 4.1489 0.2487 20.7, 34.1 -0.53
RIX:CC(030 x 061) m 32.833 2.318   3 1.3383 0.0706 31.3, 35.5 -0.21
RIX:CC(033 x 046) m 67.65 35.595   6 14.532 0.5262 29.4, 100.0 2.63
RIX:CC(035 x 071) m 23.533 1.4844   3 0.857 0.0631 21.9, 24.8 -0.97
RIX:CC(037 x 046) m 45.4 1.5875   3 0.91652 0.035 44.2, 47.2 0.82
RIX:CC(037 x 057) m 46.433 2.2053   3 1.2732 0.0475 44.0, 48.3 0.9
RIX:CC(038 x 013) m 35.167 4.0857   3 2.3589 0.1162 30.5, 38.1 -0.02
RIX:CC(040 x 003) m 32.5 1.1269   3 0.65064 0.0347 31.2, 33.2 -0.24
RIX:CC(040 x 015) m 35.1 0.43589   3 0.25166 0.0124 34.6, 35.4 -0.03
RIX:CC(041 x 016) m 30.667 2.3459   3 1.3544 0.0765 28.1, 32.7 -0.39
RIX:CC(042 x 019) m 21.533 4.7816   3 2.7606 0.2221 16.1, 25.1 -1.13
RIX:CC(043 x 033) m 37.867 3.3126   3 1.9125 0.0875 34.4, 41.0 0.2
RIX:CC(043 x 037) m 42.833 4.1405   3 2.3905 0.0967 38.4, 46.6 0.61
RIX:CC(044 x 060) m 34.533 0.32146   3 0.18559 0.0093 34.3, 34.9 -0.07
RIX:CC(045 x 044) m 41.633 7.305   3 4.2176 0.1755 34.9, 49.4 0.51
RIX:CC(046 x 068) m 29.433 1.7039   3 0.98376 0.0579 28.4, 31.4 -0.49
RIX:CC(051 x 009) m 29.467 5.4077   3 3.1221 0.1835 23.3, 33.4 -0.48
RIX:CC(052 x 014) m 47.1 0.70711   2   0.5 0.015 46.6, 47.6 0.95
RIX:CC(055 x 028) m 31.733 2.0008   3 1.1552 0.0631 29.7, 33.7 -0.3
RIX:CC(057 x 052) m 52.07 0.9815   3 0.56667 0.0189 51.5, 53.2 1.36
RIX:CC(058 x 022) m 35.567 3.0746   3 1.7751 0.0864 33.5, 39.1 0.01
RIX:CC(060 x 006) m 38.733 0.30551   3 0.17638 0.0079 38.4, 39.0 0.27
RIX:CC(060 x 037) m 38.5 1.3115   3 0.75719 0.0341 37.3, 39.9 0.25
RIX:CC(061 x 025) m 47.333 1.2741   3 0.7356 0.0269 46.5, 48.8 0.97
RIX:CC(061 x 039) m 39.0 1.5875   3 0.91652 0.0407 37.8, 40.8 0.29
RIX:CC(062 x 046) m 32.733 2.7099   3 1.5645 0.0828 29.9, 35.3 -0.22
RIX:CC(062 x 072) m 27.533 9.3088   3 5.3744 0.3381 16.8, 33.4 -0.64
RIX:CC(063 x 001) m 47.933 3.2929   3 1.9012 0.0687 45.6, 51.7 1.02
RIX:CC(063 x 002) m 31.9 2.7731   3 1.601 0.0869 28.7, 33.6 -0.29
RIX:CC(065 x 072) m 16.633 3.9311   3 2.2696 0.2363 12.1, 19.1 -1.53
RIX:CC(068 x 035) m 26.033 6.704   3 3.8705 0.2575 18.3, 30.2 -0.77
RIX:CC(068 x 043) m 30.433 2.3029   3 1.3296 0.0757 27.9, 32.4 -0.41
RIX:CC(070 x 003) m 39.4 2.6627   3 1.5373 0.0676 36.9, 42.2 0.33
RIX:CC(072 x 063) m 20.467 9.943   3 5.7406 0.4858 11.1, 30.9 -1.22
RIX:CC(072 x 075) m 30.167 2.2189   3 1.2811 0.0736 27.7, 32.0 -0.43
RIX:CC(074 x 058) m 27.7 10.143   3 5.8561 0.3662 16.1, 34.9 -0.63
RIX:CC(074 x 062) m 29.9 0.95394   3 0.55076 0.0319 28.8, 30.5 -0.45
RIX:CC(075 x 021) m 36.633 6.0178   3 3.4744 0.1643 30.9, 42.9 0.1
RIX:CC(075 x 035) m 17.25 12.199   3 7.0431 0.7072 4.35, 28.6 -1.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 36.8666666667 4.8328621275 46.4209039868 27.3124293466
RIX:CC(002 x 021) m 37.1666666667 4.8328621275 46.7209039868 27.6124293466
RIX:CC(003 x 062) m 43.8666666667 4.8328621275 53.4209039868 34.3124293466
RIX:CC(005 x 038) m 29.9666666667 4.8328621275 39.5209039868 20.4124293466
RIX:CC(005 x 040) m 26.4 4.8328621275 35.9542373201 16.8457626799
RIX:CC(006 x 039) m 16.9333333333 4.8328621275 26.4875706534 7.3790960132
RIX:CC(007 x 070) m 38.6 4.8328621275 48.1542373201 29.0457626799
RIX:CC(008 x 009) m 20.1666666667 4.8328621275 29.7209039868 10.6124293466
RIX:CC(008 x 010) m 23.4 4.8328621275 32.9542373201 13.8457626799
RIX:CC(008 x 018) m 39.8333333333 4.8328621275 49.3875706534 30.2790960132
RIX:CC(010 x 015) m 47.0666666667 4.8328621275 56.6209039868 37.5124293466
RIX:CC(012 x 038) m 40.5666666667 4.8328621275 50.1209039868 31.0124293466
RIX:CC(013 x 041) m 30.6333333333 3.4173495829 37.3891993315 23.8774673352
RIX:CC(014 x 059) m 46.0 4.8328621275 55.5542373201 36.4457626799
RIX:CC(015 x 018) m 42.7333333333 4.8328621275 52.2875706534 33.1790960132
RIX:CC(015 x 059) m 43.5666666667 4.8328621275 53.1209039868 34.0124293466
RIX:CC(016 x 038) m 34.7 4.8328621275 44.2542373201 25.1457626799
RIX:CC(019 x 002) m 34.7 4.8328621275 44.2542373201 25.1457626799
RIX:CC(019 x 004) m 38.7666666667 4.8328621275 48.3209039868 29.2124293466
RIX:CC(019 x 027) m 33.6 4.8328621275 43.1542373201 24.0457626799
RIX:CC(022 x 024) m 38.0 4.8328621275 47.5542373201 28.4457626799
RIX:CC(022 x 044) m 29.5333333333 4.8328621275 39.0875706534 19.9790960132
RIX:CC(023 x 025) m 31.9666666667 4.8328621275 41.5209039868 22.4124293466
RIX:CC(024 x 052) m 100.0 4.8328621275 109.5542373201 90.4457626799
RIX:CC(025 x 028) m 16.7666666667 4.8328621275 26.3209039868 7.2124293466
RIX:CC(026 x 034) m 24.9666666667 4.8328621275 34.5209039868 15.4124293466
RIX:CC(027 x 045) m 42.7333333333 4.8328621275 52.2875706534 33.1790960132
RIX:CC(029 x 027) m 25.2333333333 4.8328621275 34.7875706534 15.6790960132
RIX:CC(029 x 071) m 32.7333333333 4.8328621275 42.2875706534 23.1790960132
RIX:CC(030 x 023) m 28.9 4.8328621275 38.4542373201 19.3457626799
RIX:CC(030 x 061) m 32.8333333333 4.8328621275 42.3875706534 23.2790960132
RIX:CC(033 x 046) m 67.65 3.4173495829 74.4058659981 60.8941340019
RIX:CC(035 x 071) m 23.5333333333 4.8328621275 33.0875706534 13.9790960132
RIX:CC(037 x 046) m 45.4 4.8328621275 54.9542373201 35.8457626799
RIX:CC(037 x 057) m 46.4333333333 4.8328621275 55.9875706534 36.8790960132
RIX:CC(038 x 013) m 35.1666666667 4.8328621275 44.7209039868 25.6124293466
RIX:CC(040 x 003) m 32.5 4.8328621275 42.0542373201 22.9457626799
RIX:CC(040 x 015) m 35.1 4.8328621275 44.6542373201 25.5457626799
RIX:CC(041 x 016) m 30.6666666667 4.8328621275 40.2209039868 21.1124293466
RIX:CC(042 x 019) m 21.5333333333 4.8328621275 31.0875706534 11.9790960132
RIX:CC(043 x 033) m 37.8666666667 4.8328621275 47.4209039868 28.3124293466
RIX:CC(043 x 037) m 42.8333333333 4.8328621275 52.3875706534 33.2790960132
RIX:CC(044 x 060) m 34.5333333333 4.8328621275 44.0875706534 24.9790960132
RIX:CC(045 x 044) m 41.6333333333 4.8328621275 51.1875706534 32.0790960132
RIX:CC(046 x 068) m 29.4333333333 4.8328621275 38.9875706534 19.8790960132
RIX:CC(051 x 009) m 29.4666666667 4.8328621275 39.0209039868 19.9124293466
RIX:CC(052 x 014) m 47.1 5.9190231048 58.8015031579 35.3984968421
RIX:CC(055 x 028) m 31.7333333333 4.8328621275 41.2875706534 22.1790960132
RIX:CC(057 x 052) m 52.0666666667 4.8328621275 61.6209039868 42.5124293466
RIX:CC(058 x 022) m 35.5666666667 4.8328621275 45.1209039868 26.0124293466
RIX:CC(060 x 006) m 38.7333333333 4.8328621275 48.2875706534 29.1790960132
RIX:CC(060 x 037) m 38.5 4.8328621275 48.0542373201 28.9457626799
RIX:CC(061 x 025) m 47.3333333333 4.8328621275 56.8875706534 37.7790960132
RIX:CC(061 x 039) m 39.0 4.8328621275 48.5542373201 29.4457626799
RIX:CC(062 x 046) m 32.7333333333 4.8328621275 42.2875706534 23.1790960132
RIX:CC(062 x 072) m 27.5333333333 4.8328621275 37.0875706534 17.9790960132
RIX:CC(063 x 001) m 47.9333333333 4.8328621275 57.4875706534 38.3790960132
RIX:CC(063 x 002) m 31.9 4.8328621275 41.4542373201 22.3457626799
RIX:CC(065 x 072) m 16.6333333333 4.8328621275 26.1875706534 7.0790960132
RIX:CC(068 x 035) m 26.0333333333 4.8328621275 35.5875706534 16.4790960132
RIX:CC(068 x 043) m 30.4333333333 4.8328621275 39.9875706534 20.8790960132
RIX:CC(070 x 003) m 39.4 4.8328621275 48.9542373201 29.8457626799
RIX:CC(072 x 063) m 20.4666666667 4.8328621275 30.0209039868 10.9124293466
RIX:CC(072 x 075) m 30.1666666667 4.8328621275 39.7209039868 20.6124293466
RIX:CC(074 x 058) m 27.7 4.8328621275 37.2542373201 18.1457626799
RIX:CC(074 x 062) m 29.9 4.8328621275 39.4542373201 20.3457626799
RIX:CC(075 x 021) m 36.6333333333 4.8328621275 46.1875706534 27.0790960132
RIX:CC(075 x 035) m 17.25 4.8328621275 26.8042373201 7.6957626799




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA