Project measure / variable:   Graham3   mp_CD3_pos_CD4_pos

ID, description, units MPD:113817   mp_CD3_pos_CD4_pos   percentage of splenic CD3+ T cells that are CD4+ (memory precursor panel)   [%]  
Data set, strains Graham3   CC RIX   92 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic CD3+ T cells that are CD4+ (memory precursor panel)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested92 strains
Mean of the strain means55.08   %
Median of the strain means56.23   %
SD of the strain means± 8.5033
Coefficient of variation (CV)0.1544
Min–max range of strain means31.633   –   69.73   %
Mean sample size per strain3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 91 21419.7353 235.3817 8.6205 < 0.0001
Residuals 259 7071.9873 27.305


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) m 60.47 3.371   3 1.9462 0.0557 56.7, 63.2 0.63
RIX:CC(001 x 074) m 57.43 3.1214   3 1.8022 0.0543 55.2, 61.0 0.28
RIX:CC(002 x 011) m 59.72 6.9329   6 2.8304 0.1161 45.9, 65.4 0.55
RIX:CC(002 x 021) m 46.8 9.3987   6 3.837 0.2008 37.9, 63.7 -0.97
RIX:CC(003 x 051) m 50.5 2.4265   6 0.99062 0.048 46.6, 52.6 -0.54
RIX:CC(003 x 062) m 58.8 0.96437   3 0.55678 0.0164 58.1, 59.9 0.44
RIX:CC(004 x 011) m 60.4 11.124   6 4.5414 0.1842 42.8, 73.1 0.63
RIX:CC(004 x 012) m 52.93 3.6914   6 1.507 0.0697 47.7, 56.9 -0.25
RIX:CC(005 x 001) m 55.03 1.7603   6 0.71864 0.032 52.7, 57.6 -0.01
RIX:CC(005 x 038) m 47.833 4.4859   3 2.5899 0.0938 42.7, 51.0 -0.85
RIX:CC(005 x 040) m 68.4 0.8544   3 0.49329 0.0125 67.6, 69.3 1.57
RIX:CC(006 x 007) m 61.43 3.5119   3 2.0276 0.0572 58.1, 65.1 0.75
RIX:CC(006 x 039) m 55.17 3.8004   3 2.1942 0.0689 51.4, 59.0 0.01
RIX:CC(007 x 070) m 62.9 11.458   3 6.6154 0.1822 50.1, 72.2 0.92
RIX:CC(008 x 009) m 31.633 1.4295   3 0.82529 0.0452 30.4, 33.2 -2.76
RIX:CC(008 x 018) m 47.833 0.83865   3 0.48419 0.0175 47.3, 48.8 -0.85
RIX:CC(009 x 040) m 62.15 7.8258   6 3.1949 0.1259 50.7, 70.4 0.83
RIX:CC(010 x 015) m 63.5 2.8618   3 1.6523 0.0451 60.2, 65.3 0.99
RIX:CC(010 x 060) m 32.1 3.2741   3 1.8903 0.102 28.5, 34.9 -2.7
RIX:CC(011 x 032) m 51.6 16.958   6 6.9232 0.3286 30.3, 69.7 -0.41
RIX:CC(011 x 042) m 58.1 5.4666   6 2.2317 0.0941 47.4, 62.3 0.35
RIX:CC(012 x 032) m 62.18 1.9894   6 0.81216 0.032 60.2, 65.3 0.83
RIX:CC(012 x 038) m 63.97 1.914   3 1.105 0.0299 62.4, 66.1 1.05
RIX:CC(013 x 041) m 51.87 1.9222   6 0.78472 0.0371 49.4, 54.1 -0.38
RIX:CC(014 x 059) m 43.9 2.506   3 1.4468 0.0571 41.3, 46.3 -1.31
RIX:CC(015 x 018) m 60.5 1.2   3 0.69282 0.0198 59.3, 61.7 0.64
RIX:CC(015 x 059) m 61.0 1.0   3 0.57735 0.0164 60.0, 62.0 0.7
RIX:CC(016 x 038) m 60.47 3.2563   3 1.88 0.0539 57.1, 63.6 0.63
RIX:CC(017 x 004) m 60.08 1.4878   6 0.60741 0.0248 59.0, 62.9 0.59
RIX:CC(017 x 041) m 51.22 1.8691   6 0.76307 0.0365 48.8, 53.3 -0.45
RIX:CC(018 x 009) m 53.67 2.7025   3 1.5603 0.0504 50.9, 56.3 -0.17
RIX:CC(018 x 065) m 49.7 5.0291   6 2.0531 0.1012 43.0, 56.9 -0.63
RIX:CC(019 x 002) m 61.19 2.186   8 0.77285 0.0357 58.5, 64.3 0.72
RIX:CC(019 x 004) m 52.17 10.808   3 6.2397 0.2072 39.8, 59.8 -0.34
RIX:CC(019 x 027) m 61.87 1.6289   3 0.94045 0.0263 60.0, 63.0 0.8
RIX:CC(022 x 044) m 38.733 5.5139   3 3.1835 0.1424 32.8, 43.7 -1.92
RIX:CC(024 x 023) m 54.65 3.6391   6 1.4857 0.0666 49.7, 60.6 -0.05
RIX:CC(024 x 052) m 51.33 3.8812   3 2.2408 0.0756 47.2, 54.9 -0.44
RIX:CC(025 x 028) m 42.867 6.501   3 3.7534 0.1517 36.3, 49.3 -1.44
RIX:CC(026 x 034) m 58.7 0.45826   3 0.26458 0.0078 58.3, 59.2 0.43
RIX:CC(027 x 036) m 39.667 0.61101   3 0.35277 0.0154 39.0, 40.2 -1.81
RIX:CC(029 x 027) m 40.533 6.309   3 3.6425 0.1556 33.3, 44.9 -1.71
RIX:CC(029 x 071) m 45.833 4.8232   3 2.7847 0.1052 42.9, 51.4 -1.09
RIX:CC(030 x 061) m 55.57 7.398   6 3.0202 0.1331 46.6, 63.5 0.06
RIX:CC(032 x 013) m 61.45 1.4349   6 0.5858 0.0234 59.3, 63.5 0.75
RIX:CC(032 x 017) m 54.02 5.9948   6 2.4474 0.111 43.9, 59.3 -0.12
RIX:CC(033 x 046) m 53.9 11.17   6 4.5602 0.2072 39.6, 65.3 -0.14
RIX:CC(035 x 020) m 69.73 1.5503   3 0.89505 0.0222 68.6, 71.5 1.72
RIX:CC(035 x 071) m 54.47 3.3501   3 1.9342 0.0615 50.6, 56.5 -0.07
RIX:CC(037 x 046) m 67.63 1.893   3 1.0929 0.028 66.3, 69.8 1.48
RIX:CC(037 x 057) m 66.37 0.85049   3 0.49103 0.0128 65.5, 67.2 1.33
RIX:CC(038 x 013) m 61.57 0.37859   3 0.21858 0.0061 61.3, 62.0 0.76
RIX:CC(040 x 003) m 68.83 4.1187   3 2.3779 0.0598 64.1, 71.6 1.62
RIX:CC(040 x 015) m 67.17 1.6563   3 0.95627 0.0247 65.6, 68.9 1.42
RIX:CC(041 x 012) m 46.717 3.3671   6 1.3746 0.0721 42.4, 51.6 -0.98
RIX:CC(041 x 016) m 47.733 1.2662   3 0.73106 0.0265 46.3, 48.7 -0.86
RIX:CC(042 x 017) m 58.18 5.6951   6 2.325 0.0979 49.2, 65.1 0.36
RIX:CC(042 x 019) m 57.47 1.3577   3 0.78387 0.0236 56.2, 58.9 0.28
RIX:CC(043 x 033) m 63.03 0.68069   3 0.39299 0.0108 62.5, 63.8 0.93
RIX:CC(043 x 037) m 67.2 0.36056   3 0.20817 0.0054 66.8, 67.5 1.43
RIX:CC(045 x 044) m 41.2 4.7843   3 2.7622 0.1161 38.0, 46.7 -1.63
RIX:CC(046 x 068) m 61.93 3.1005   3 1.7901 0.0501 58.8, 65.0 0.81
RIX:CC(049 x 036) m 62.5 0.78102   3 0.45092 0.0125 61.6, 63.0 0.87
RIX:CC(051 x 005) m 54.41 2.9969   7 1.1327 0.0551 49.7, 57.7 -0.08
RIX:CC(051 x 009) m 48.933 4.4959   3 2.5957 0.0919 44.0, 52.8 -0.72
RIX:CC(052 x 007) m 64.07 2.9687   3 1.714 0.0463 60.8, 66.6 1.06
RIX:CC(052 x 014) m 59.37 2.8361   3 1.6374 0.0478 56.1, 61.2 0.5
RIX:CC(055 x 006) m 62.4 1.9157   3 1.106 0.0307 60.2, 63.7 0.86
RIX:CC(056 x 033) m 50.17 4.0154   3 2.3183 0.08 47.7, 54.8 -0.58
RIX:CC(057 x 052) m 56.9 2.0421   3 1.179 0.0359 55.3, 59.2 0.21
RIX:CC(058 x 022) m 64.4 3.6428   3 2.1032 0.0566 60.2, 66.7 1.1
RIX:CC(059 x 065) m 58.03 0.90738   3 0.52387 0.0156 57.2, 59.0 0.35
RIX:CC(060 x 006) m 37.433 6.1906   3 3.5741 0.1654 30.3, 41.4 -2.08
RIX:CC(060 x 037) m 45.5 0.60828   3 0.35119 0.0134 44.8, 45.9 -1.13
RIX:CC(061 x 025) m 47.333 2.558   3 1.4769 0.054 44.9, 50.0 -0.91
RIX:CC(061 x 026) m 59.03 1.7786   3 1.0269 0.0301 57.0, 60.3 0.46
RIX:CC(061 x 039) m 34.6 6.6573   3 3.8436 0.1924 27.0, 39.4 -2.41
RIX:CC(062 x 046) m 50.83 1.159   3 0.66916 0.0228 49.6, 51.9 -0.5
RIX:CC(062 x 072) m 53.43 3.7634   3 2.1728 0.0704 49.2, 56.4 -0.19
RIX:CC(063 x 001) m 48.4 3.5171   3 2.0306 0.0727 44.7, 51.7 -0.79
RIX:CC(063 x 002) m 61.77 2.1595   3 1.2468 0.035 59.5, 63.8 0.79
RIX:CC(065 x 010) m 60.67 5.2812   6 2.156 0.0871 52.4, 67.3 0.66
RIX:CC(065 x 072) m 54.37 7.4769   3 4.3168 0.1375 50.0, 63.0 -0.08
RIX:CC(068 x 035) m 48.333 2.0599   3 1.1893 0.0426 46.4, 50.5 -0.79
RIX:CC(068 x 043) m 60.83 4.8686   3 2.8109 0.08 56.7, 66.2 0.68
RIX:CC(070 x 003) m 68.23 2.0502   3 1.1837 0.03 66.2, 70.3 1.55
RIX:CC(072 x 063) m 53.77 5.154   3 2.9756 0.0959 48.5, 58.8 -0.15
RIX:CC(072 x 075) m 59.3 3.9154   3 2.2605 0.066 56.2, 63.7 0.5
RIX:CC(074 x 058) m 47.0 5.6347   3 3.2532 0.1199 40.5, 50.5 -0.95
RIX:CC(074 x 062) m 52.87 0.45092   3 0.26034 0.0085 52.4, 53.3 -0.26
RIX:CC(075 x 021) m 50.57 0.32146   3 0.18559 0.0064 50.2, 50.8 -0.53
RIX:CC(075 x 035) m 57.03 4.9943   3 2.8835 0.0876 51.7, 61.6 0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 60.4666666667 3.0168952226 66.4074328262 54.5259005071
RIX:CC(001 x 074) m 57.4333333333 3.0168952226 63.3740994929 51.4925671738
RIX:CC(002 x 011) m 59.7166666667 2.1332670701 63.9174227035 55.5159106298
RIX:CC(002 x 021) m 46.8 2.1332670701 51.0007560369 42.5992439631
RIX:CC(003 x 051) m 50.5 2.1332670701 54.7007560369 46.2992439631
RIX:CC(003 x 062) m 58.8 3.0168952226 64.7407661595 52.8592338405
RIX:CC(004 x 011) m 60.4 2.1332670701 64.6007560369 56.1992439631
RIX:CC(004 x 012) m 52.9333333333 2.1332670701 57.1340893702 48.7325772965
RIX:CC(005 x 001) m 55.0333333333 2.1332670701 59.2340893702 50.8325772965
RIX:CC(005 x 038) m 47.8333333333 3.0168952226 53.7740994929 41.8925671738
RIX:CC(005 x 040) m 68.4 3.0168952226 74.3407661595 62.4592338405
RIX:CC(006 x 007) m 61.4333333333 3.0168952226 67.3740994929 55.4925671738
RIX:CC(006 x 039) m 55.1666666667 3.0168952226 61.1074328262 49.2259005071
RIX:CC(007 x 070) m 62.9 3.0168952226 68.8407661595 56.9592338405
RIX:CC(008 x 009) m 31.6333333333 3.0168952226 37.5740994929 25.6925671738
RIX:CC(008 x 018) m 47.8333333333 3.0168952226 53.7740994929 41.8925671738
RIX:CC(009 x 040) m 62.15 2.1332670701 66.3507560369 57.9492439631
RIX:CC(010 x 015) m 63.5 3.0168952226 69.4407661595 57.5592338405
RIX:CC(010 x 060) m 32.1 3.0168952226 38.0407661595 26.1592338405
RIX:CC(011 x 032) m 51.6 2.1332670701 55.8007560369 47.3992439631
RIX:CC(011 x 042) m 58.1 2.1332670701 62.3007560369 53.8992439631
RIX:CC(012 x 032) m 62.1833333333 2.1332670701 66.3840893702 57.9825772965
RIX:CC(012 x 038) m 63.9666666667 3.0168952226 69.9074328262 58.0259005071
RIX:CC(013 x 041) m 51.8666666667 2.1332670701 56.0674227035 47.6659106298
RIX:CC(014 x 059) m 43.9 3.0168952226 49.8407661595 37.9592338405
RIX:CC(015 x 018) m 60.5 3.0168952226 66.4407661595 54.5592338405
RIX:CC(015 x 059) m 61.0 3.0168952226 66.9407661595 55.0592338405
RIX:CC(016 x 038) m 60.4666666667 3.0168952226 66.4074328262 54.5259005071
RIX:CC(017 x 004) m 60.0833333333 2.1332670701 64.2840893702 55.8825772965
RIX:CC(017 x 041) m 51.2166666667 2.1332670701 55.4174227035 47.0159106298
RIX:CC(018 x 009) m 53.6666666667 3.0168952226 59.6074328262 47.7259005071
RIX:CC(018 x 065) m 49.7 2.1332670701 53.9007560369 45.4992439631
RIX:CC(019 x 002) m 61.1875 1.8474634757 64.825461443 57.549538557
RIX:CC(019 x 004) m 52.1666666667 3.0168952226 58.1074328262 46.2259005071
RIX:CC(019 x 027) m 61.8666666667 3.0168952226 67.8074328262 55.9259005071
RIX:CC(022 x 044) m 38.7333333333 3.0168952226 44.6740994929 32.7925671738
RIX:CC(024 x 023) m 54.65 2.1332670701 58.8507560369 50.4492439631
RIX:CC(024 x 052) m 51.3333333333 3.0168952226 57.2740994929 45.3925671738
RIX:CC(025 x 028) m 42.8666666667 3.0168952226 48.8074328262 36.9259005071
RIX:CC(026 x 034) m 58.7 3.0168952226 64.6407661595 52.7592338405
RIX:CC(027 x 036) m 39.6666666667 3.0168952226 45.6074328262 33.7259005071
RIX:CC(029 x 027) m 40.5333333333 3.0168952226 46.4740994929 34.5925671738
RIX:CC(029 x 071) m 45.8333333333 3.0168952226 51.7740994929 39.8925671738
RIX:CC(030 x 061) m 55.5666666667 2.1332670701 59.7674227035 51.3659106298
RIX:CC(032 x 013) m 61.45 2.1332670701 65.6507560369 57.2492439631
RIX:CC(032 x 017) m 54.0166666667 2.1332670701 58.2174227035 49.8159106298
RIX:CC(033 x 046) m 53.9 2.1332670701 58.1007560369 49.6992439631
RIX:CC(035 x 020) m 69.7333333333 3.0168952226 75.6740994929 63.7925671738
RIX:CC(035 x 071) m 54.4666666667 3.0168952226 60.4074328262 48.5259005071
RIX:CC(037 x 046) m 67.6333333333 3.0168952226 73.5740994929 61.6925671738
RIX:CC(037 x 057) m 66.3666666667 3.0168952226 72.3074328262 60.4259005071
RIX:CC(038 x 013) m 61.5666666667 3.0168952226 67.5074328262 55.6259005071
RIX:CC(040 x 003) m 68.8333333333 3.0168952226 74.7740994929 62.8925671738
RIX:CC(040 x 015) m 67.1666666667 3.0168952226 73.1074328262 61.2259005071
RIX:CC(041 x 012) m 46.7166666667 2.1332670701 50.9174227035 42.5159106298
RIX:CC(041 x 016) m 47.7333333333 3.0168952226 53.6740994929 41.7925671738
RIX:CC(042 x 017) m 58.1833333333 2.1332670701 62.3840893702 53.9825772965
RIX:CC(042 x 019) m 57.4666666667 3.0168952226 63.4074328262 51.5259005071
RIX:CC(043 x 033) m 63.0333333333 3.0168952226 68.9740994929 57.0925671738
RIX:CC(043 x 037) m 67.2 3.0168952226 73.1407661595 61.2592338405
RIX:CC(045 x 044) m 41.2 3.0168952226 47.1407661595 35.2592338405
RIX:CC(046 x 068) m 61.9333333333 3.0168952226 67.8740994929 55.9925671738
RIX:CC(049 x 036) m 62.5 3.0168952226 68.4407661595 56.5592338405
RIX:CC(051 x 005) m 54.4142857143 1.9750215316 58.3034300875 50.5251413411
RIX:CC(051 x 009) m 48.9333333333 3.0168952226 54.8740994929 42.9925671738
RIX:CC(052 x 007) m 64.0666666667 3.0168952226 70.0074328262 58.1259005071
RIX:CC(052 x 014) m 59.3666666667 3.0168952226 65.3074328262 53.4259005071
RIX:CC(055 x 006) m 62.4 3.0168952226 68.3407661595 56.4592338405
RIX:CC(056 x 033) m 50.1666666667 3.0168952226 56.1074328262 44.2259005071
RIX:CC(057 x 052) m 56.9 3.0168952226 62.8407661595 50.9592338405
RIX:CC(058 x 022) m 64.4 3.0168952226 70.3407661595 58.4592338405
RIX:CC(059 x 065) m 58.0333333333 3.0168952226 63.9740994929 52.0925671738
RIX:CC(060 x 006) m 37.4333333333 3.0168952226 43.3740994929 31.4925671738
RIX:CC(060 x 037) m 45.5 3.0168952226 51.4407661595 39.5592338405
RIX:CC(061 x 025) m 47.3333333333 3.0168952226 53.2740994929 41.3925671738
RIX:CC(061 x 026) m 59.0333333333 3.0168952226 64.9740994929 53.0925671738
RIX:CC(061 x 039) m 34.6 3.0168952226 40.5407661595 28.6592338405
RIX:CC(062 x 046) m 50.8333333333 3.0168952226 56.7740994929 44.8925671738
RIX:CC(062 x 072) m 53.4333333333 3.0168952226 59.3740994929 47.4925671738
RIX:CC(063 x 001) m 48.4 3.0168952226 54.3407661595 42.4592338405
RIX:CC(063 x 002) m 61.7666666667 3.0168952226 67.7074328262 55.8259005071
RIX:CC(065 x 010) m 60.6666666667 2.1332670701 64.8674227035 56.4659106298
RIX:CC(065 x 072) m 54.3666666667 3.0168952226 60.3074328262 48.4259005071
RIX:CC(068 x 035) m 48.3333333333 3.0168952226 54.2740994929 42.3925671738
RIX:CC(068 x 043) m 60.8333333333 3.0168952226 66.7740994929 54.8925671738
RIX:CC(070 x 003) m 68.2333333333 3.0168952226 74.1740994929 62.2925671738
RIX:CC(072 x 063) m 53.7666666667 3.0168952226 59.7074328262 47.8259005071
RIX:CC(072 x 075) m 59.3 3.0168952226 65.2407661595 53.3592338405
RIX:CC(074 x 058) m 47.0 3.0168952226 52.9407661595 41.0592338405
RIX:CC(074 x 062) m 52.8666666667 3.0168952226 58.8074328262 46.9259005071
RIX:CC(075 x 021) m 50.5666666667 3.0168952226 56.5074328262 44.6259005071
RIX:CC(075 x 035) m 57.0333333333 3.0168952226 62.9740994929 51.0925671738




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA