Project measure / variable:   Graham3   mp_CD3_pos

ID, description, units MPD:113812   mp_CD3_pos   percentage of splenic lymphocytes that are CD3+ T cells (memory precursor panel)   [%]  
Data set, strains Graham3   CC RIX   92 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic lymphocytes that are CD3+ T cells (memory precursor panel)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested92 strains
Mean of the strain means35.682   %
Median of the strain means36.367   %
SD of the strain means± 9.7971
Coefficient of variation (CV)0.2746
Min–max range of strain means13.427   –   61.42   %
Mean sample size per strain3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 91 33964.7435 373.2389 9.7977 < 0.0001
Residuals 259 9866.4672 38.0945


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) m 50.63 1.5948   3 0.92075 0.0315 48.8, 51.7 1.53
RIX:CC(001 x 074) m 46.067 1.0693   3 0.61734 0.0232 45.4, 47.3 1.06
RIX:CC(002 x 011) m 26.45 8.3665   6 3.4156 0.3163 11.6, 34.2 -0.94
RIX:CC(002 x 021) m 38.567 4.4003   6 1.7964 0.1141 33.4, 42.8 0.29
RIX:CC(003 x 051) m 61.42 5.8895   6 2.4044 0.0959 52.0, 69.1 2.63
RIX:CC(003 x 062) m 42.0 0.87178   3 0.50332 0.0208 41.0, 42.6 0.64
RIX:CC(004 x 011) m 20.378 8.7783   6 3.5837 0.4308 6.57, 29.5 -1.56
RIX:CC(004 x 012) m 39.617 8.4353   6 3.4437 0.2129 27.9, 51.8 0.4
RIX:CC(005 x 001) m 39.35 2.6614   6 1.0865 0.0676 35.5, 42.6 0.37
RIX:CC(005 x 038) m 33.067 0.66583   3 0.38442 0.0201 32.3, 33.5 -0.27
RIX:CC(005 x 040) m 20.067 8.2501   3 4.7632 0.4111 14.2, 29.5 -1.59
RIX:CC(006 x 007) m 47.433 2.7301   3 1.5762 0.0576 44.3, 49.3 1.2
RIX:CC(006 x 039) m 14.0 1.7436   3 1.0066 0.1245 12.0, 15.2 -2.21
RIX:CC(007 x 070) m 40.367 7.7571   3 4.4786 0.1922 31.5, 45.9 0.48
RIX:CC(008 x 009) m 24.733 1.106   3 0.63857 0.0447 23.7, 25.9 -1.12
RIX:CC(008 x 018) m 39.1 1.249   3 0.72111 0.0319 38.1, 40.5 0.35
RIX:CC(009 x 040) m 21.483 8.0141   6 3.2717 0.373 10.6, 31.6 -1.45
RIX:CC(010 x 015) m 48.833 3.5921   3 2.0739 0.0736 44.7, 51.2 1.34
RIX:CC(010 x 060) m 40.033 13.495   3 7.7911 0.3371 25.0, 51.1 0.44
RIX:CC(011 x 032) m 21.202 10.835   6 4.4234 0.511 9.41, 34.0 -1.48
RIX:CC(011 x 042) m 22.933 1.919   6 0.78344 0.0837 20.1, 25.6 -1.3
RIX:CC(012 x 032) m 35.183 7.5967   6 3.1013 0.2159 20.7, 43.5 -0.05
RIX:CC(012 x 038) m 45.533 3.1565   3 1.8224 0.0693 43.1, 49.1 1.01
RIX:CC(013 x 041) m 33.9 1.5684   6 0.64031 0.0463 31.4, 35.7 -0.18
RIX:CC(014 x 059) m 51.47 0.50332   3 0.29059 0.0098 51.0, 52.0 1.61
RIX:CC(015 x 018) m 49.467 5.1013   3 2.9452 0.1031 44.3, 54.5 1.41
RIX:CC(015 x 059) m 47.3 4.4034   3 2.5423 0.0931 43.0, 51.8 1.19
RIX:CC(016 x 038) m 44.867 5.0053   3 2.8898 0.1116 40.0, 50.0 0.94
RIX:CC(017 x 004) m 36.717 6.9998   6 2.8577 0.1906 27.9, 45.1 0.11
RIX:CC(017 x 041) m 32.133 4.0038   6 1.6346 0.1246 28.1, 38.6 -0.36
RIX:CC(018 x 009) m 31.167 5.8244   3 3.3627 0.1869 24.7, 36.0 -0.46
RIX:CC(018 x 065) m 30.567 12.865   6 5.252 0.4209 20.3, 48.1 -0.52
RIX:CC(019 x 002) m 42.15 9.1531   8 3.2361 0.2172 30.4, 56.5 0.66
RIX:CC(019 x 004) m 37.667 9.029   3 5.2129 0.2397 27.7, 45.3 0.2
RIX:CC(019 x 027) m 34.433 2.4338   3 1.4051 0.0707 31.8, 36.6 -0.13
RIX:CC(022 x 044) m 37.9 8.3899   3 4.8439 0.2214 28.6, 44.9 0.23
RIX:CC(024 x 023) m 32.6 8.9938   6 3.6717 0.2759 17.1, 41.1 -0.31
RIX:CC(024 x 052) m 47.067 3.7541   3 2.1674 0.0798 43.0, 50.4 1.16
RIX:CC(025 x 028) m 29.8 5.8232   3 3.362 0.1954 23.7, 35.3 -0.6
RIX:CC(026 x 034) m 39.9 0.9   3 0.51962 0.0226 39.0, 40.8 0.43
RIX:CC(027 x 036) m 36.3 1.4526   3 0.83865 0.04 34.9, 37.8 0.06
RIX:CC(029 x 027) m 38.233 10.038   3 5.7955 0.2625 26.7, 45.0 0.26
RIX:CC(029 x 071) m 32.667 2.4111   3 1.392 0.0738 30.4, 35.2 -0.31
RIX:CC(030 x 061) m 32.717 2.711   6 1.1068 0.0829 29.0, 36.2 -0.3
RIX:CC(032 x 013) m 32.967 3.8474   6 1.5707 0.1167 26.8, 37.8 -0.28
RIX:CC(032 x 017) m 33.183 3.2152   6 1.3126 0.0969 28.9, 37.1 -0.26
RIX:CC(033 x 046) m 29.717 9.1077   6 3.7182 0.3065 19.4, 38.4 -0.61
RIX:CC(035 x 020) m 30.233 0.64291   3 0.37118 0.0213 29.5, 30.7 -0.56
RIX:CC(035 x 071) m 24.267 3.0039   3 1.7343 0.1238 20.8, 26.1 -1.17
RIX:CC(037 x 046) m 53.4 0.79373   3 0.45826 0.0149 52.5, 54.0 1.81
RIX:CC(037 x 057) m 42.967 3.1342   3 1.8095 0.0729 39.6, 45.8 0.74
RIX:CC(038 x 013) m 34.667 1.5308   3 0.8838 0.0442 32.9, 35.6 -0.1
RIX:CC(040 x 003) m 36.1 1.6093   3 0.92916 0.0446 34.4, 37.6 0.04
RIX:CC(040 x 015) m 36.6 0.8544   3 0.49329 0.0233 35.7, 37.4 0.09
RIX:CC(041 x 012) m 40.533 5.9621   6 2.434 0.1471 30.6, 46.0 0.5
RIX:CC(041 x 016) m 33.1 1.4799   3 0.8544 0.0447 32.1, 34.8 -0.26
RIX:CC(042 x 017) m 13.427 5.2926   6 2.1607 0.3942 7.02, 18.9 -2.27
RIX:CC(042 x 019) m 39.033 12.162   3 7.0215 0.3116 25.0, 46.5 0.34
RIX:CC(043 x 033) m 34.2 0.65574   3 0.37859 0.0192 33.5, 34.8 -0.15
RIX:CC(043 x 037) m 39.0 3.1796   3 1.8358 0.0815 35.6, 41.9 0.34
RIX:CC(045 x 044) m 35.9 0.55678   3 0.32146 0.0155 35.4, 36.5 0.02
RIX:CC(046 x 068) m 32.633 1.0214   3 0.58973 0.0313 31.9, 33.8 -0.31
RIX:CC(049 x 036) m 43.8 2.3065   3 1.3317 0.0527 41.4, 46.0 0.83
RIX:CC(051 x 005) m 50.84 5.3122   7 2.0078 0.1045 43.3, 59.1 1.55
RIX:CC(051 x 009) m 32.533 6.9816   3 4.0309 0.2146 24.7, 38.1 -0.32
RIX:CC(052 x 007) m 46.4 6.7357   3 3.8889 0.1452 40.1, 53.5 1.09
RIX:CC(052 x 014) m 50.17 3.8734   3 2.2363 0.0772 45.7, 52.6 1.48
RIX:CC(055 x 006) m 46.9 1.3892   3 0.80208 0.0296 46.0, 48.5 1.15
RIX:CC(056 x 033) m 30.167 9.2743   3 5.3545 0.3074 22.1, 40.3 -0.56
RIX:CC(057 x 052) m 25.933 5.9248   3 3.4207 0.2285 19.3, 30.7 -1.0
RIX:CC(058 x 022) m 38.267 3.9119   3 2.2586 0.1022 35.3, 42.7 0.26
RIX:CC(059 x 065) m 30.8 4.0731   3 2.3516 0.1322 26.5, 34.6 -0.5
RIX:CC(060 x 006) m 39.033 5.4537   3 3.1487 0.1397 33.7, 44.6 0.34
RIX:CC(060 x 037) m 46.133 2.2368   3 1.2914 0.0485 43.7, 48.1 1.07
RIX:CC(061 x 025) m 47.733 2.8006   3 1.6169 0.0587 44.5, 49.4 1.23
RIX:CC(061 x 026) m 36.433 0.90738   3 0.52387 0.0249 35.4, 37.1 0.08
RIX:CC(061 x 039) m 35.333 5.2501   3 3.0311 0.1486 30.1, 40.6 -0.04
RIX:CC(062 x 046) m 47.367 3.0567   3 1.7648 0.0645 44.2, 50.3 1.19
RIX:CC(062 x 072) m 26.767 9.8653   3 5.6957 0.3686 15.4, 33.1 -0.91
RIX:CC(063 x 001) m 46.033 2.8378   3 1.6384 0.0616 43.5, 49.1 1.06
RIX:CC(063 x 002) m 28.7 3.6166   3 2.0881 0.126 25.3, 32.5 -0.71
RIX:CC(065 x 010) m 37.55 9.088   6 3.7101 0.242 19.9, 44.1 0.19
RIX:CC(065 x 072) m 13.5 5.1118   3 2.9513 0.3786 10.4, 19.4 -2.26
RIX:CC(068 x 035) m 20.867 4.5004   3 2.5983 0.2157 17.6, 26.0 -1.51
RIX:CC(068 x 043) m 27.8 3.9154   3 2.2605 0.1408 24.7, 32.2 -0.8
RIX:CC(070 x 003) m 37.467 4.5281   3 2.6143 0.1209 33.5, 42.4 0.18
RIX:CC(072 x 063) m 19.367 8.2008   3 4.7347 0.4234 11.1, 27.5 -1.67
RIX:CC(072 x 075) m 22.567 3.3232   3 1.9186 0.1473 20.5, 26.4 -1.34
RIX:CC(074 x 058) m 17.733 4.1765   3 2.4113 0.2355 13.0, 20.9 -1.83
RIX:CC(074 x 062) m 39.267 2.248   3 1.2979 0.0572 36.8, 41.2 0.37
RIX:CC(075 x 021) m 37.467 4.6231   3 2.6692 0.1234 32.6, 41.8 0.18
RIX:CC(075 x 035) m 20.403 13.392   3 7.732 0.6564 6.41, 33.1 -1.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 50.6333333333 3.5634472009 57.6503508233 43.6163158433
RIX:CC(001 x 074) m 46.0666666667 3.5634472009 53.0836841567 39.0496491767
RIX:CC(002 x 011) m 26.45 2.5197376802 31.4117806509 21.4882193491
RIX:CC(002 x 021) m 38.5666666667 2.5197376802 43.5284473176 33.6048860158
RIX:CC(003 x 051) m 61.4166666667 2.5197376802 66.3784473175 56.4548860158
RIX:CC(003 x 062) m 42.0 3.5634472009 49.01701749 34.98298251
RIX:CC(004 x 011) m 20.3783333333 2.5197376802 25.3401139842 15.4165526824
RIX:CC(004 x 012) m 39.6166666667 2.5197376802 44.5784473176 34.6548860158
RIX:CC(005 x 001) m 39.35 2.5197376802 44.3117806509 34.3882193491
RIX:CC(005 x 038) m 33.0666666667 3.5634472009 40.0836841567 26.0496491767
RIX:CC(005 x 040) m 20.0666666667 3.5634472009 27.0836841567 13.0496491767
RIX:CC(006 x 007) m 47.4333333333 3.5634472009 54.4503508233 40.4163158433
RIX:CC(006 x 039) m 14.0 3.5634472009 21.01701749 6.98298251
RIX:CC(007 x 070) m 40.3666666667 3.5634472009 47.3836841567 33.3496491767
RIX:CC(008 x 009) m 24.7333333333 3.5634472009 31.7503508233 17.7163158433
RIX:CC(008 x 018) m 39.1 3.5634472009 46.11701749 32.08298251
RIX:CC(009 x 040) m 21.4833333333 2.5197376802 26.4451139842 16.5215526824
RIX:CC(010 x 015) m 48.8333333333 3.5634472009 55.8503508233 41.8163158433
RIX:CC(010 x 060) m 40.0333333333 3.5634472009 47.0503508233 33.0163158433
RIX:CC(011 x 032) m 21.2016666667 2.5197376802 26.1634473176 16.2398860158
RIX:CC(011 x 042) m 22.9333333333 2.5197376802 27.8951139842 17.9715526824
RIX:CC(012 x 032) m 35.1833333333 2.5197376802 40.1451139842 30.2215526824
RIX:CC(012 x 038) m 45.5333333333 3.5634472009 52.5503508233 38.5163158433
RIX:CC(013 x 041) m 33.9 2.5197376802 38.8617806509 28.9382193491
RIX:CC(014 x 059) m 51.4666666667 3.5634472009 58.4836841567 44.4496491767
RIX:CC(015 x 018) m 49.4666666667 3.5634472009 56.4836841567 42.4496491767
RIX:CC(015 x 059) m 47.3 3.5634472009 54.31701749 40.28298251
RIX:CC(016 x 038) m 44.8666666667 3.5634472009 51.8836841567 37.8496491767
RIX:CC(017 x 004) m 36.7166666667 2.5197376802 41.6784473176 31.7548860158
RIX:CC(017 x 041) m 32.1333333333 2.5197376802 37.0951139842 27.1715526824
RIX:CC(018 x 009) m 31.1666666667 3.5634472009 38.1836841567 24.1496491767
RIX:CC(018 x 065) m 30.5666666667 2.5197376802 35.5284473176 25.6048860158
RIX:CC(019 x 002) m 42.15 2.1821568419 46.4470280917 37.8529719083
RIX:CC(019 x 004) m 37.6666666667 3.5634472009 44.6836841567 30.6496491767
RIX:CC(019 x 027) m 34.4333333333 3.5634472009 41.4503508233 27.4163158433
RIX:CC(022 x 044) m 37.9 3.5634472009 44.91701749 30.88298251
RIX:CC(024 x 023) m 32.6 2.5197376802 37.5617806509 27.6382193491
RIX:CC(024 x 052) m 47.0666666667 3.5634472009 54.0836841567 40.0496491767
RIX:CC(025 x 028) m 29.8 3.5634472009 36.81701749 22.78298251
RIX:CC(026 x 034) m 39.9 3.5634472009 46.91701749 32.88298251
RIX:CC(027 x 036) m 36.3 3.5634472009 43.31701749 29.28298251
RIX:CC(029 x 027) m 38.2333333333 3.5634472009 45.2503508233 31.2163158433
RIX:CC(029 x 071) m 32.6666666667 3.5634472009 39.6836841567 25.6496491767
RIX:CC(030 x 061) m 32.7166666667 2.5197376802 37.6784473176 27.7548860158
RIX:CC(032 x 013) m 32.9666666667 2.5197376802 37.9284473176 28.0048860158
RIX:CC(032 x 017) m 33.1833333333 2.5197376802 38.1451139842 28.2215526824
RIX:CC(033 x 046) m 29.7166666667 2.5197376802 34.6784473176 24.7548860158
RIX:CC(035 x 020) m 30.2333333333 3.5634472009 37.2503508233 23.2163158433
RIX:CC(035 x 071) m 24.2666666667 3.5634472009 31.2836841567 17.2496491767
RIX:CC(037 x 046) m 53.4 3.5634472009 60.41701749 46.38298251
RIX:CC(037 x 057) m 42.9666666667 3.5634472009 49.9836841567 35.9496491767
RIX:CC(038 x 013) m 34.6666666667 3.5634472009 41.6836841567 27.6496491767
RIX:CC(040 x 003) m 36.1 3.5634472009 43.11701749 29.08298251
RIX:CC(040 x 015) m 36.6 3.5634472009 43.61701749 29.58298251
RIX:CC(041 x 012) m 40.5333333333 2.5197376802 45.4951139842 35.5715526824
RIX:CC(041 x 016) m 33.1 3.5634472009 40.11701749 26.08298251
RIX:CC(042 x 017) m 13.4266666667 2.5197376802 18.3884473176 8.4648860158
RIX:CC(042 x 019) m 39.0333333333 3.5634472009 46.0503508233 32.0163158433
RIX:CC(043 x 033) m 34.2 3.5634472009 41.21701749 27.18298251
RIX:CC(043 x 037) m 39.0 3.5634472009 46.01701749 31.98298251
RIX:CC(045 x 044) m 35.9 3.5634472009 42.91701749 28.88298251
RIX:CC(046 x 068) m 32.6333333333 3.5634472009 39.6503508233 25.6163158433
RIX:CC(049 x 036) m 43.8 3.5634472009 50.81701749 36.78298251
RIX:CC(051 x 005) m 50.8428571429 2.3328237905 55.4365734001 46.2491408856
RIX:CC(051 x 009) m 32.5333333333 3.5634472009 39.5503508233 25.5163158433
RIX:CC(052 x 007) m 46.4 3.5634472009 53.41701749 39.38298251
RIX:CC(052 x 014) m 50.1666666667 3.5634472009 57.1836841567 43.1496491767
RIX:CC(055 x 006) m 46.9 3.5634472009 53.91701749 39.88298251
RIX:CC(056 x 033) m 30.1666666667 3.5634472009 37.1836841567 23.1496491767
RIX:CC(057 x 052) m 25.9333333333 3.5634472009 32.9503508233 18.9163158433
RIX:CC(058 x 022) m 38.2666666667 3.5634472009 45.2836841567 31.2496491767
RIX:CC(059 x 065) m 30.8 3.5634472009 37.81701749 23.78298251
RIX:CC(060 x 006) m 39.0333333333 3.5634472009 46.0503508233 32.0163158433
RIX:CC(060 x 037) m 46.1333333333 3.5634472009 53.1503508233 39.1163158433
RIX:CC(061 x 025) m 47.7333333333 3.5634472009 54.7503508233 40.7163158433
RIX:CC(061 x 026) m 36.4333333333 3.5634472009 43.4503508233 29.4163158433
RIX:CC(061 x 039) m 35.3333333333 3.5634472009 42.3503508233 28.3163158433
RIX:CC(062 x 046) m 47.3666666667 3.5634472009 54.3836841567 40.3496491767
RIX:CC(062 x 072) m 26.7666666667 3.5634472009 33.7836841567 19.7496491767
RIX:CC(063 x 001) m 46.0333333333 3.5634472009 53.0503508233 39.0163158433
RIX:CC(063 x 002) m 28.7 3.5634472009 35.71701749 21.68298251
RIX:CC(065 x 010) m 37.55 2.5197376802 42.5117806509 32.5882193491
RIX:CC(065 x 072) m 13.5 3.5634472009 20.51701749 6.48298251
RIX:CC(068 x 035) m 20.8666666667 3.5634472009 27.8836841567 13.8496491767
RIX:CC(068 x 043) m 27.8 3.5634472009 34.81701749 20.78298251
RIX:CC(070 x 003) m 37.4666666667 3.5634472009 44.4836841567 30.4496491767
RIX:CC(072 x 063) m 19.3666666667 3.5634472009 26.3836841567 12.3496491767
RIX:CC(072 x 075) m 22.5666666667 3.5634472009 29.5836841567 15.5496491767
RIX:CC(074 x 058) m 17.7333333333 3.5634472009 24.7503508233 10.7163158433
RIX:CC(074 x 062) m 39.2666666667 3.5634472009 46.2836841567 32.2496491767
RIX:CC(075 x 021) m 37.4666666667 3.5634472009 44.4836841567 30.4496491767
RIX:CC(075 x 035) m 20.4033333333 3.5634472009 27.4203508233 13.3863158433




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA