Project measure / variable:   Graham3   CD4_pos_tot

ID, description, units MPD:113800   CD4_pos_tot   percentage of splenic lymphocytes that are CD4+ T cells   [%]  
Data set, strains Graham3   CC RIX   102 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic lymphocytes that are CD4+ T cells



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested102 strains
Mean of the strain means21.185   %
Median of the strain means21.275   %
SD of the strain means± 5.5131
Coefficient of variation (CV)0.2602
Min–max range of strain means9.375   –   31.633   %
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 101 13525.2254 133.9131 6.1768 < 0.0001
Residuals 362 7848.135 21.6799


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) m 26.617 6.1623   6 2.5157 0.2315 17.7, 33.8 0.99
RIX:CC(001 x 074) m 25.567 1.9009   3 1.0975 0.0743 23.7, 27.5 0.79
RIX:CC(002 x 011) m 16.502 6.3328   6 2.5853 0.3838 5.51, 22.1 -0.85
RIX:CC(002 x 021) m 20.05 4.9565   6 2.0235 0.2472 16.0, 28.1 -0.21
RIX:CC(003 x 051) m 30.35 4.4185   6 1.8038 0.1456 23.5, 36.8 1.66
RIX:CC(003 x 062) m 26.183 2.1545   6 0.87955 0.0823 24.2, 30.0 0.91
RIX:CC(004 x 011) m 15.51 9.1509   6 3.7358 0.59 3.43, 25.2 -1.03
RIX:CC(004 x 012) m 21.867 3.4984   6 1.4282 0.16 15.7, 26.0 0.12
RIX:CC(005 x 001) m 24.15 1.378   6 0.56258 0.0571 22.3, 25.8 0.54
RIX:CC(005 x 038) m 28.433 2.2189   3 1.2811 0.078 26.6, 30.9 1.31
RIX:CC(005 x 040) m 18.15 5.0663   6 2.0683 0.2791 10.9, 22.7 -0.55
RIX:CC(006 x 007) m 25.7 3.4421   6 1.4052 0.1339 20.5, 30.0 0.82
RIX:CC(006 x 039) m 9.87 1.1622   3 0.67099 0.1178 8.61, 10.9 -2.05
RIX:CC(007 x 070) m 28.967 9.3152   3 5.3781 0.3216 18.3, 35.5 1.41
RIX:CC(007 x 075) m 22.567 11.163   3 6.4452 0.4947 11.1, 33.4 0.25
RIX:CC(008 x 009) m 14.067 0.85049   3 0.49103 0.0605 13.1, 14.7 -1.29
RIX:CC(008 x 010) m 10.637 5.8962   3 3.4042 0.5543 4.81, 16.6 -1.91
RIX:CC(008 x 018) m 18.067 2.2234   3 1.2837 0.1231 15.5, 19.4 -0.57
RIX:CC(009 x 040) m 14.878 5.2057   6 2.1252 0.3499 8.37, 22.0 -1.14
RIX:CC(010 x 015) m 30.9 3.8606   6 1.5761 0.1249 26.8, 36.0 1.76
RIX:CC(010 x 060) m 22.467 8.9673   3 5.1773 0.3991 12.4, 29.6 0.23
RIX:CC(011 x 032) m 15.603 8.5087   6 3.4737 0.5453 4.66, 25.0 -1.01
RIX:CC(011 x 042) m 14.05 2.1594   6 0.88157 0.1537 11.0, 16.6 -1.29
RIX:CC(012 x 032) m 21.7 4.9218   6 2.0093 0.2268 12.6, 25.6 0.09
RIX:CC(012 x 038) m 26.7 2.571   3 1.4844 0.0963 24.7, 29.6 1.0
RIX:CC(013 x 041) m 17.867 0.76158   9 0.25386 0.0426 16.9, 19.0 -0.6
RIX:CC(014 x 059) m 23.883 3.2615   6 1.3315 0.1366 17.6, 26.7 0.49
RIX:CC(015 x 018) m 31.083 2.7549   6 1.1247 0.0886 26.6, 34.2 1.8
RIX:CC(015 x 059) m 27.333 3.8786   3 2.2393 0.1419 22.9, 30.1 1.12
RIX:CC(016 x 038) m 26.033 7.1517   6 2.9197 0.2747 12.4, 31.8 0.88
RIX:CC(017 x 004) m 16.5 3.2187   6 1.314 0.1951 11.9, 20.6 -0.85
RIX:CC(017 x 041) m 17.533 1.9531   6 0.79736 0.1114 15.2, 20.1 -0.66
RIX:CC(018 x 009) m 20.233 1.8824   3 1.0868 0.093 19.0, 22.4 -0.17
RIX:CC(018 x 065) m 17.913 8.9396   6 3.6496 0.499 9.98, 29.6 -0.59
RIX:CC(019 x 002) m 25.482 3.3526   11 1.0108 0.1316 20.4, 31.1 0.78
RIX:CC(019 x 004) m 24.85 5.0997   6 2.0819 0.2052 15.7, 30.5 0.66
RIX:CC(019 x 027) m 22.267 2.318   3 1.3383 0.1041 19.6, 23.8 0.2
RIX:CC(022 x 024) m 23.0 2.4062   3 1.3892 0.1046 20.7, 25.5 0.33
RIX:CC(022 x 044) m 22.067 7.9739   3 4.6037 0.3614 12.9, 27.4 0.16
RIX:CC(023 x 025) m 18.333 3.3501   3 1.9342 0.1827 14.7, 21.3 -0.52
RIX:CC(024 x 023) m 18.318 5.6322   6 2.2993 0.3075 8.41, 24.8 -0.52
RIX:CC(024 x 052) m 25.3 3.9038   3 2.2539 0.1543 21.3, 29.1 0.75
RIX:CC(025 x 028) m 10.633 4.7067   6 1.9215 0.4426 5.96, 17.5 -1.91
RIX:CC(026 x 034) m 22.0 3.1382   6 1.2811 0.1426 16.8, 25.2 0.15
RIX:CC(027 x 036) m 24.367 1.6803   3 0.97011 0.069 22.9, 26.2 0.58
RIX:CC(027 x 045) m 25.467 2.3544   3 1.3593 0.0925 23.2, 27.9 0.78
RIX:CC(029 x 027) m 13.158 6.7683   6 2.7632 0.5144 4.22, 19.5 -1.46
RIX:CC(029 x 071) m 16.133 0.20817   3 0.12019 0.0129 15.9, 16.3 -0.92
RIX:CC(030 x 023) m 18.333 5.4446   3 3.1434 0.297 12.4, 23.1 -0.52
RIX:CC(030 x 061) m 20.767 4.4221   6 1.8053 0.2129 14.6, 25.4 -0.08
RIX:CC(032 x 013) m 21.517 2.4028   6 0.98096 0.1117 18.2, 24.4 0.06
RIX:CC(032 x 017) m 18.617 3.6141   6 1.4754 0.1941 12.3, 22.0 -0.47
RIX:CC(033 x 046) m 16.948 6.9576   6 2.8404 0.4105 9.59, 25.8 -0.77
RIX:CC(033 x 068) m 18.567 1.365   3 0.78811 0.0735 17.1, 19.8 -0.47
RIX:CC(035 x 020) m 17.767 1.2583   3 0.72648 0.0708 16.6, 19.1 -0.62
RIX:CC(035 x 071) m 13.1 1.6   3 0.92376 0.1221 11.5, 14.7 -1.47
RIX:CC(037 x 046) m 31.633 1.365   3 0.78811 0.0432 30.4, 33.1 1.9
RIX:CC(037 x 057) m 27.567 3.2272   6 1.3175 0.1171 22.2, 30.5 1.16
RIX:CC(038 x 013) m 23.1 1.467   6 0.59889 0.0635 21.1, 24.8 0.35
RIX:CC(039 x 020) m 15.167 2.4685   3 1.4252 0.1628 13.1, 17.9 -1.09
RIX:CC(040 x 003) m 25.467 1.8928   6 0.77273 0.0743 21.9, 27.6 0.78
RIX:CC(040 x 015) m 26.667 1.6921   3 0.97696 0.0635 24.8, 28.1 0.99
RIX:CC(041 x 012) m 18.7 3.8869   6 1.5868 0.2079 12.9, 22.8 -0.45
RIX:CC(041 x 016) m 15.1 1.821   6 0.74342 0.1206 12.5, 17.1 -1.1
RIX:CC(042 x 017) m 9.375 4.5771   6 1.8686 0.4882 4.3, 14.8 -2.14
RIX:CC(042 x 019) m 18.417 6.9993   6 2.8574 0.3801 9.3, 27.4 -0.5
RIX:CC(043 x 033) m 23.767 1.7098   3 0.98714 0.0719 21.8, 24.9 0.47
RIX:CC(043 x 037) m 27.667 2.2106   6 0.90247 0.0799 25.5, 30.2 1.18
RIX:CC(044 x 060) m 25.867 0.85049   3 0.49103 0.0329 24.9, 26.5 0.85
RIX:CC(045 x 044) m 18.95 4.3164   6 1.7621 0.2278 13.6, 25.6 -0.41
RIX:CC(046 x 068) m 19.867 3.2035   6 1.3078 0.1613 13.8, 22.6 -0.24
RIX:CC(049 x 036) m 26.8 0.9   3 0.51962 0.0336 25.9, 27.7 1.02
RIX:CC(051 x 005) m 26.943 2.8165   7 1.0645 0.1045 23.5, 31.9 1.04
RIX:CC(051 x 009) m 16.6 4.4855   6 1.8312 0.2702 10.3, 21.3 -0.83
RIX:CC(052 x 007) m 27.5 5.9908   3 3.4588 0.2178 22.2, 34.0 1.15
RIX:CC(052 x 014) m 29.98 1.8006   5 0.80523 0.0601 27.8, 32.8 1.6
RIX:CC(055 x 006) m 29.8 1.9313   3 1.115 0.0648 28.1, 31.9 1.56
RIX:CC(055 x 028) m 20.6 2.3302   3 1.3454 0.1131 18.0, 22.5 -0.11
RIX:CC(056 x 033) m 15.133 5.7492   3 3.3193 0.3799 10.6, 21.6 -1.1
RIX:CC(057 x 052) m 25.733 9.8254   6 4.0112 0.3818 11.5, 34.7 0.82
RIX:CC(058 x 022) m 28.567 3.7687   3 2.1759 0.1319 24.6, 32.1 1.34
RIX:CC(059 x 065) m 18.533 2.2474   6 0.91748 0.1213 16.7, 22.5 -0.48
RIX:CC(060 x 006) m 17.078 8.7002   6 3.5519 0.5094 8.57, 25.5 -0.74
RIX:CC(060 x 037) m 28.833 1.6862   3 0.97354 0.0585 26.9, 30.0 1.39
RIX:CC(061 x 025) m 23.7 1.3229   3 0.76376 0.0558 22.7, 25.2 0.46
RIX:CC(061 x 026) m 23.8 1.8248   3 1.0536 0.0767 21.7, 25.0 0.47
RIX:CC(061 x 039) m 14.4 1.9769   6 0.80705 0.1373 12.3, 17.8 -1.23
RIX:CC(062 x 046) m 26.867 4.236   3 2.4456 0.1577 22.1, 30.2 1.03
RIX:CC(062 x 072) m 14.763 4.8099   3 2.777 0.3258 9.59, 19.1 -1.16
RIX:CC(063 x 001) m 24.333 1.8903   3 1.0914 0.0777 22.2, 25.8 0.57
RIX:CC(063 x 002) m 21.033 2.8885   3 1.6677 0.1373 17.7, 22.8 -0.03
RIX:CC(065 x 010) m 24.683 6.7146   6 2.7412 0.272 11.6, 29.8 0.63
RIX:CC(065 x 072) m 11.737 4.863   3 2.8077 0.4143 6.31, 15.7 -1.71
RIX:CC(068 x 035) m 17.1 1.9079   3 1.1015 0.1116 15.9, 19.3 -0.74
RIX:CC(068 x 043) m 20.5 1.5875   3 0.91652 0.0774 18.7, 21.7 -0.12
RIX:CC(070 x 003) m 27.1 3.1765   3 1.8339 0.1172 24.4, 30.6 1.07
RIX:CC(072 x 063) m 10.89 5.0441   3 2.9122 0.4632 7.04, 16.6 -1.87
RIX:CC(072 x 075) m 18.3 2.3812   3 1.3748 0.1301 16.5, 21.0 -0.52
RIX:CC(074 x 058) m 20.167 7.7848   3 4.4946 0.386 11.2, 25.2 -0.18
RIX:CC(074 x 062) m 25.333 3.0089   3 1.7372 0.1188 23.4, 28.8 0.75
RIX:CC(075 x 021) m 20.933 2.9939   3 1.7285 0.143 17.5, 23.0 -0.05
RIX:CC(075 x 035) m 10.887 8.0361   3 4.6396 0.7382 3.16, 19.2 -1.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 26.6166666667 1.9008739577 30.3548090822 22.8785242511
RIX:CC(001 x 074) m 25.5666666667 2.6882417314 30.8531983688 20.2801349645
RIX:CC(002 x 011) m 16.5016666667 1.9008739577 20.2398090822 12.7635242511
RIX:CC(002 x 021) m 20.05 1.9008739577 23.7881424156 16.3118575844
RIX:CC(003 x 051) m 30.35 1.9008739577 34.0881424156 26.6118575844
RIX:CC(003 x 062) m 26.1833333333 1.9008739577 29.9214757489 22.4451909178
RIX:CC(004 x 011) m 15.51 1.9008739577 19.2481424156 11.7718575844
RIX:CC(004 x 012) m 21.8666666667 1.9008739577 25.6048090822 18.1285242511
RIX:CC(005 x 001) m 24.15 1.9008739577 27.8881424156 20.4118575844
RIX:CC(005 x 038) m 28.4333333333 2.6882417314 33.7198650355 23.1468016312
RIX:CC(005 x 040) m 18.15 1.9008739577 21.8881424156 14.4118575844
RIX:CC(006 x 007) m 25.7 1.9008739577 29.4381424156 21.9618575844
RIX:CC(006 x 039) m 9.87 2.6882417314 15.1565317022 4.5834682978
RIX:CC(007 x 070) m 28.9666666667 2.6882417314 34.2531983688 23.6801349645
RIX:CC(007 x 075) m 22.5666666667 2.6882417314 27.8531983688 17.2801349645
RIX:CC(008 x 009) m 14.0666666667 2.6882417314 19.3531983688 8.7801349645
RIX:CC(008 x 010) m 10.6366666667 2.6882417314 15.9231983688 5.3501349645
RIX:CC(008 x 018) m 18.0666666667 2.6882417314 23.3531983688 12.7801349645
RIX:CC(009 x 040) m 14.8783333333 1.9008739577 18.6164757489 11.1401909178
RIX:CC(010 x 015) m 30.9 1.9008739577 34.6381424156 27.1618575844
RIX:CC(010 x 060) m 22.4666666667 2.6882417314 27.7531983688 17.1801349645
RIX:CC(011 x 032) m 15.6033333333 1.9008739577 19.3414757489 11.8651909178
RIX:CC(011 x 042) m 14.05 1.9008739577 17.7881424156 10.3118575844
RIX:CC(012 x 032) m 21.7 1.9008739577 25.4381424156 17.9618575844
RIX:CC(012 x 038) m 26.7 2.6882417314 31.9865317022 21.4134682978
RIX:CC(013 x 041) m 17.8666666667 1.5520570873 20.918847168 14.8144861653
RIX:CC(014 x 059) m 23.8833333333 1.9008739577 27.6214757489 20.1451909178
RIX:CC(015 x 018) m 31.0833333333 1.9008739577 34.8214757489 27.3451909178
RIX:CC(015 x 059) m 27.3333333333 2.6882417314 32.6198650355 22.0468016312
RIX:CC(016 x 038) m 26.0333333333 1.9008739577 29.7714757489 22.2951909178
RIX:CC(017 x 004) m 16.5 1.9008739577 20.2381424156 12.7618575844
RIX:CC(017 x 041) m 17.5333333333 1.9008739577 21.2714757489 13.7951909178
RIX:CC(018 x 009) m 20.2333333333 2.6882417314 25.5198650355 14.9468016312
RIX:CC(018 x 065) m 17.9133333333 1.9008739577 21.6514757489 14.1751909178
RIX:CC(019 x 002) m 25.4818181818 1.4038884577 28.2426193224 22.7210170413
RIX:CC(019 x 004) m 24.85 1.9008739577 28.5881424156 21.1118575844
RIX:CC(019 x 027) m 22.2666666667 2.6882417314 27.5531983688 16.9801349645
RIX:CC(022 x 024) m 23.0 2.6882417314 28.2865317022 17.7134682978
RIX:CC(022 x 044) m 22.0666666667 2.6882417314 27.3531983688 16.7801349645
RIX:CC(023 x 025) m 18.3333333333 2.6882417314 23.6198650355 13.0468016312
RIX:CC(024 x 023) m 18.3183333333 1.9008739577 22.0564757489 14.5801909178
RIX:CC(024 x 052) m 25.3 2.6882417314 30.5865317022 20.0134682978
RIX:CC(025 x 028) m 10.6333333333 1.9008739577 14.3714757489 6.8951909178
RIX:CC(026 x 034) m 22.0 1.9008739577 25.7381424156 18.2618575844
RIX:CC(027 x 036) m 24.3666666667 2.6882417314 29.6531983688 19.0801349645
RIX:CC(027 x 045) m 25.4666666667 2.6882417314 30.7531983688 20.1801349645
RIX:CC(029 x 027) m 13.1583333333 1.9008739577 16.8964757489 9.4201909178
RIX:CC(029 x 071) m 16.1333333333 2.6882417314 21.4198650355 10.8468016312
RIX:CC(030 x 023) m 18.3333333333 2.6882417314 23.6198650355 13.0468016312
RIX:CC(030 x 061) m 20.7666666667 1.9008739577 24.5048090822 17.0285242511
RIX:CC(032 x 013) m 21.5166666667 1.9008739577 25.2548090822 17.7785242511
RIX:CC(032 x 017) m 18.6166666667 1.9008739577 22.3548090822 14.8785242511
RIX:CC(033 x 046) m 16.9483333333 1.9008739577 20.6864757489 13.2101909178
RIX:CC(033 x 068) m 18.5666666667 2.6882417314 23.8531983688 13.2801349645
RIX:CC(035 x 020) m 17.7666666667 2.6882417314 23.0531983688 12.4801349645
RIX:CC(035 x 071) m 13.1 2.6882417314 18.3865317022 7.8134682978
RIX:CC(037 x 046) m 31.6333333333 2.6882417314 36.9198650355 26.3468016312
RIX:CC(037 x 057) m 27.5666666667 1.9008739577 31.3048090822 23.8285242511
RIX:CC(038 x 013) m 23.1 1.9008739577 26.8381424156 19.3618575844
RIX:CC(039 x 020) m 15.1666666667 2.6882417314 20.4531983688 9.8801349645
RIX:CC(040 x 003) m 25.4666666667 1.9008739577 29.2048090822 21.7285242511
RIX:CC(040 x 015) m 26.6666666667 2.6882417314 31.9531983688 21.3801349645
RIX:CC(041 x 012) m 18.7 1.9008739577 22.4381424156 14.9618575844
RIX:CC(041 x 016) m 15.1 1.9008739577 18.8381424156 11.3618575844
RIX:CC(042 x 017) m 9.375 1.9008739577 13.1131424156 5.6368575844
RIX:CC(042 x 019) m 18.4166666667 1.9008739577 22.1548090822 14.6785242511
RIX:CC(043 x 033) m 23.7666666667 2.6882417314 29.0531983688 18.4801349645
RIX:CC(043 x 037) m 27.6666666667 1.9008739577 31.4048090822 23.9285242511
RIX:CC(044 x 060) m 25.8666666667 2.6882417314 31.1531983688 20.5801349645
RIX:CC(045 x 044) m 18.95 1.9008739577 22.6881424156 15.2118575844
RIX:CC(046 x 068) m 19.8666666667 1.9008739577 23.6048090822 16.1285242511
RIX:CC(049 x 036) m 26.8 2.6882417314 32.0865317022 21.5134682978
RIX:CC(051 x 005) m 26.9428571429 1.7598673172 30.403704527 23.4820097587
RIX:CC(051 x 009) m 16.6 1.9008739577 20.3381424156 12.8618575844
RIX:CC(052 x 007) m 27.5 2.6882417314 32.7865317022 22.2134682978
RIX:CC(052 x 014) m 29.98 2.0823030912 34.0749298483 25.8850701517
RIX:CC(055 x 006) m 29.8 2.6882417314 35.0865317022 24.5134682978
RIX:CC(055 x 028) m 20.6 2.6882417314 25.8865317022 15.3134682978
RIX:CC(056 x 033) m 15.1333333333 2.6882417314 20.4198650355 9.8468016312
RIX:CC(057 x 052) m 25.7333333333 1.9008739577 29.4714757489 21.9951909178
RIX:CC(058 x 022) m 28.5666666667 2.6882417314 33.8531983688 23.2801349645
RIX:CC(059 x 065) m 18.5333333333 1.9008739577 22.2714757489 14.7951909178
RIX:CC(060 x 006) m 17.0783333333 1.9008739577 20.8164757489 13.3401909178
RIX:CC(060 x 037) m 28.8333333333 2.6882417314 34.1198650355 23.5468016312
RIX:CC(061 x 025) m 23.7 2.6882417314 28.9865317022 18.4134682978
RIX:CC(061 x 026) m 23.8 2.6882417314 29.0865317022 18.5134682978
RIX:CC(061 x 039) m 14.4 1.9008739577 18.1381424156 10.6618575844
RIX:CC(062 x 046) m 26.8666666667 2.6882417314 32.1531983688 21.5801349645
RIX:CC(062 x 072) m 14.7633333333 2.6882417314 20.0498650355 9.4768016312
RIX:CC(063 x 001) m 24.3333333333 2.6882417314 29.6198650355 19.0468016312
RIX:CC(063 x 002) m 21.0333333333 2.6882417314 26.3198650355 15.7468016312
RIX:CC(065 x 010) m 24.6833333333 1.9008739577 28.4214757489 20.9451909178
RIX:CC(065 x 072) m 11.7366666667 2.6882417314 17.0231983688 6.4501349645
RIX:CC(068 x 035) m 17.1 2.6882417314 22.3865317022 11.8134682978
RIX:CC(068 x 043) m 20.5 2.6882417314 25.7865317022 15.2134682978
RIX:CC(070 x 003) m 27.1 2.6882417314 32.3865317022 21.8134682978
RIX:CC(072 x 063) m 10.89 2.6882417314 16.1765317022 5.6034682978
RIX:CC(072 x 075) m 18.3 2.6882417314 23.5865317022 13.0134682978
RIX:CC(074 x 058) m 20.1666666667 2.6882417314 25.4531983688 14.8801349645
RIX:CC(074 x 062) m 25.3333333333 2.6882417314 30.6198650355 20.0468016312
RIX:CC(075 x 021) m 20.9333333333 2.6882417314 26.2198650355 15.6468016312
RIX:CC(075 x 035) m 10.8866666667 2.6882417314 16.1731983688 5.6001349645




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA