Project measure / variable:   Graham2   log_titer_d4

ID, description, units MPD:113791   log_titer_d4   lung viral load titer (log10(x+1)), post infection   [log(n)]  day 4  
SARS-CoV study
Data set, strains Graham2   CC RIX   102 strains     sex: f     age: 8-10wks
Procedure in vitro assay
Availability note:Individual animal data were not submitted. Some functionality not available.
Ontology mappings

  STRAIN COMPARISON PLOT
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Graham2 - lung viral load titer (log10(x+1)), post infection day 4



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested102 strains
Mean of the strain means4.0698   log(n)
Median of the strain means4.495   log(n)
SD of the strain means± 1.5683
Coefficient of variation (CV)0.3854
Min–max range of strain means0.0   –   6.47   log(n)
Mean sample size per strainNone   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 074) f 5.84 None   None None 1.13
RIX:CC(002 x 011) f 4.44 None   None None 0.24
RIX:CC(003 x 051) f 4.31 None   None None 0.15
RIX:CC(003 x 062) f 3.04 None   None None -0.66
RIX:CC(004 x 011) f 6.0 None   None None 1.23
RIX:CC(004 x 012) f 3.0 None   None None -0.68
RIX:CC(005 x 001) f 4.89 None   None None 0.52
RIX:CC(005 x 038) f 4.77 None   None None 0.45
RIX:CC(005 x 040) f 4.2 None   None None 0.08
RIX:CC(006 x 007) f 3.04 None   None None -0.66
RIX:CC(006 x 039) f 5.32 None   None None 0.8
RIX:CC(007 x 070) f 2.82 None   None None -0.8
RIX:CC(007 x 075) f 5.04 None   None None 0.62
RIX:CC(008 x 009) f 0.0 None   None None -2.6
RIX:CC(008 x 010) f 1.54 None   None None -1.61
RIX:CC(008 x 018) f 1.61 None   None None -1.57
RIX:CC(009 x 040) f 3.73 None   None None -0.22
RIX:CC(010 x 015) f 4.85 None   None None 0.5
RIX:CC(011 x 032) f 0.0 None   None None -2.6
RIX:CC(011 x 042) f 3.88 None   None None -0.12
RIX:CC(012 x 032) f 2.37 None   None None -1.08
RIX:CC(012 x 038) f 2.66 None   None None -0.9
RIX:CC(013 x 041) f 5.24 None   None None 0.75
RIX:CC(014 x 059) f 0.0 None   None None -2.6
RIX:CC(015 x 018) f 5.23 None   None None 0.74
RIX:CC(015 x 059) f 4.9 None   None None 0.53
RIX:CC(016 x 038) f 5.06 None   None None 0.63
RIX:CC(016 x 061) f 5.51 None   None None 0.92
RIX:CC(017 x 004) f 5.82 None   None None 1.12
RIX:CC(017 x 041) f 6.16 None   None None 1.33
RIX:CC(018 x 065) f 3.92 None   None None -0.1
RIX:CC(019 x 002) f 3.05 None   None None -0.65
RIX:CC(019 x 004) f 4.43 None   None None 0.23
RIX:CC(019 x 027) f 5.17 None   None None 0.7
RIX:CC(020 x 008) f 2.0 None   None None -1.32
RIX:CC(021 x 023) f 1.54 None   None None -1.61
RIX:CC(022 x 024) f 5.47 None   None None 0.89
RIX:CC(022 x 044) f 4.52 None   None None 0.29
RIX:CC(023 x 025) f 3.71 None   None None -0.23
RIX:CC(024 x 023) f 2.23 None   None None -1.17
RIX:CC(024 x 052) f 5.32 None   None None 0.8
RIX:CC(025 x 028) f 5.81 None   None None 1.11
RIX:CC(026 x 034) f 5.24 None   None None 0.75
RIX:CC(027 x 036) f 3.65 None   None None -0.27
RIX:CC(027 x 045) f 5.08 None   None None 0.64
RIX:CC(028 x 024) f 6.47 None   None None 1.53
RIX:CC(029 x 027) f 4.7 None   None None 0.4
RIX:CC(029 x 071) f 5.76 None   None None 1.08
RIX:CC(030 x 023) f 0.0 None   None None -2.6
RIX:CC(030 x 061) f 2.52 None   None None -0.99
RIX:CC(032 x 013) f 1.83 None   None None -1.43
RIX:CC(032 x 017) f 1.04 None   None None -1.93
RIX:CC(033 x 046) f 5.61 None   None None 0.98
RIX:CC(034 x 016) f 5.13 None   None None 0.68
RIX:CC(035 x 020) f 4.93 None   None None 0.55
RIX:CC(035 x 071) f 6.1 None   None None 1.29
RIX:CC(036 x 051) f 3.51 None   None None -0.36
RIX:CC(037 x 046) f 6.01 None   None None 1.24
RIX:CC(037 x 057) f 3.07 None   None None -0.64
RIX:CC(038 x 013) f 3.75 None   None None -0.2
RIX:CC(039 x 020) f 3.15 None   None None -0.59
RIX:CC(040 x 003) f 4.47 None   None None 0.26
RIX:CC(040 x 015) f 5.78 None   None None 1.09
RIX:CC(041 x 012) f 5.47 None   None None 0.89
RIX:CC(041 x 016) f 5.08 None   None None 0.64
RIX:CC(042 x 017) f 4.85 None   None None 0.5
RIX:CC(042 x 019) f 2.93 None   None None -0.73
RIX:CC(043 x 033) f 5.12 None   None None 0.67
RIX:CC(043 x 037) f 5.04 None   None None 0.62
RIX:CC(044 x 060) f 4.3 None   None None 0.15
RIX:CC(045 x 044) f 4.75 None   None None 0.43
RIX:CC(046 x 068) f 4.47 None   None None 0.26
RIX:CC(049 x 036) f 0.0 None   None None -2.6
RIX:CC(051 x 005) f 4.47 None   None None 0.26
RIX:CC(051 x 009) f 2.43 None   None None -1.05
RIX:CC(052 x 014) f 2.37 None   None None -1.08
RIX:CC(055 x 028) f 1.54 None   None None -1.61
RIX:CC(056 x 033) f 5.48 None   None None 0.9
RIX:CC(057 x 052) f 4.45 None   None None 0.24
RIX:CC(058 x 022) f 5.69 None   None None 1.03
RIX:CC(059 x 065) f 4.47 None   None None 0.26
RIX:CC(060 x 006) f 4.19 None   None None 0.08
RIX:CC(060 x 037) f 4.16 None   None None 0.06
RIX:CC(061 x 025) f 5.28 None   None None 0.77
RIX:CC(061 x 026) f 4.95 None   None None 0.56
RIX:CC(061 x 039) f 4.52 None   None None 0.29
RIX:CC(062 x 046) f 5.06 None   None None 0.63
RIX:CC(062 x 072) f 3.98 None   None None -0.06
RIX:CC(063 x 001) f 4.72 None   None None 0.41
RIX:CC(063 x 002) f 3.0 None   None None -0.68
RIX:CC(065 x 010) f 5.52 None   None None 0.92
RIX:CC(065 x 072) f 4.76 None   None None 0.44
RIX:CC(068 x 035) f 4.74 None   None None 0.43
RIX:CC(068 x 043) f 5.02 None   None None 0.61
RIX:CC(070 x 003) f 1.41 None   None None -1.7
RIX:CC(071 x 053) f 4.94 None   None None 0.55
RIX:CC(071 x 058) f 5.45 None   None None 0.88
RIX:CC(072 x 063) f 3.42 None   None None -0.41
RIX:CC(072 x 075) f 4.35 None   None None 0.18
RIX:CC(074 x 058) f 5.11 None   None None 0.66
RIX:CC(075 x 021) f 2.31 None   None None -1.12
RIX:CC(075 x 035) f 5.08 None   None None 0.64


GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA