Project measure / variable:   CSNA03   antici_incorrect_cc_rev_Binghamton

ID, description, units MPD:112908   antici_incorrect_cc_rev_Binghamton   mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains18 strains
Mean of the strain means0.98974   n 0.91266   n
Median of the strain means0.95352   n 0.84496   n
SD of the strain means± 0.52856 ± 0.49327
Coefficient of variation (CV)0.534 0.5405
Min–max range of strain means0.26908   –   2.4018   n 0.22682   –   1.9389   n
Mean sample size per strain4.5   mice 4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.6496 1.6496 3.4027 0.0677
strain 16 27.4345 1.7147 3.5368 < 0.0001
sex:strain 16 9.3562 0.5848 1.2062 0.2744
Residuals 112 54.2978 0.4848


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.2426 0.69511   7 0.26273 0.5594 0.46, 2.5 0.48
129S1/SvImJ m 1.3784 0.92171   5 0.4122 0.6687 0.11194, 2.66 0.94
A/J f 1.4249 0.73681   6 0.3008 0.5171 0.50481, 2.2357 0.82
A/J m 1.1001 0.4098   6 0.1673 0.3725 0.5065, 1.615 0.38
C57BL/6J f 0.87946 0.33341   5 0.1491 0.3791 0.46309, 1.3295 -0.21
C57BL/6J m 0.85433 0.66657   6 0.27213 0.7802 0.245, 2.0989 -0.12
CAST/EiJ f 0.26908 0.16277   6 0.06645 0.6049 0.05, 0.414 -1.36
CAST/EiJ m 0.42642 0.12032   4 0.06016 0.2822 0.3529, 0.60625 -0.99
CC002/UncJ f 1.1954 0.1632   2   0.1154 0.1365 1.08, 1.3108 0.39
CC002/UncJ m 0.31265 0.15464   2   0.10935 0.4946 0.2033, 0.422 -1.22
CC004/TauUncJ f 0.60861 0.29737   4 0.14868 0.4886 0.36842, 1.0269 -0.72
CC004/TauUncJ m 0.55646 0.27744   6 0.11326 0.4986 0.2748, 0.927 -0.72
CC006/TauUncJ f 1.4323 1.3984   3 0.80738 0.9763 0.194, 2.949 0.84
CC006/TauUncJ m 0.87404 0.63986   3 0.36942 0.7321 0.487, 1.6126 -0.08
CC011/UncJ f 0.96129 1.1531   3 0.66572 1.1995 0.14286, 2.28 -0.05
CC011/UncJ m 1.6335 0.09405   2   0.0665 0.0576 1.567, 1.7 1.46
CC012/GeniUncJ f 0.88497 0.51157   3 0.29535 0.5781 0.3709, 1.394 -0.2
CC012/GeniUncJ m 0.8356 0.2858   3 0.16501 0.342 0.573, 1.14 -0.16
CC025/GeniUncJ m 1.9389 2.0436   2   1.445 1.054 0.4939, 3.384 2.08
CC028/GeniUncJ f 0.36467 0.10058   3 0.05807 0.2758 0.286, 0.478 -1.18
CC028/GeniUncJ m 0.73527 0.23375   3 0.13496 0.3179 0.5918, 1.005 -0.36
CC032/GeniUncJ f 0.888 0.17678   2   0.125 0.1991 0.763, 1.013 -0.19
CC032/GeniUncJ m 0.87307 0.38478   3 0.22215 0.4407 0.4303, 1.1264 -0.08
CC041/TauUncJ f 1.3571 0.9557   6 0.39016 0.7042 0.55, 3.0476 0.7
CC041/TauUncJ m 0.86536 0.57787   5 0.25843 0.6678 0.35593, 1.7791 -0.1
CC061/GeniUncJ f 1.1665 0.95917   3 0.55378 0.8223 0.4888, 2.264 0.33
CC061/GeniUncJ m 1.829 0.78437   3 0.45285 0.4289 1.133, 2.6789 1.86
NOD/ShiLtJ f 0.95352 0.52651   5 0.23546 0.5522 0.455, 1.6279 -0.07
NOD/ShiLtJ m 0.56308 0.34884   5 0.156 0.6195 0.17, 1.1162 -0.71
NZO/HlLtJ f 2.4018 1.8575   7 0.70207 0.7734 0.15, 5.33 2.67
NZO/HlLtJ m 0.83435 0.23609   4 0.11805 0.283 0.70245, 1.188 -0.16
PWK/PhJ f 0.28266 0.23093   6 0.09428 0.817 0.045, 0.6147 -1.34
PWK/PhJ m 0.22682 0.1108   6 0.04523 0.4885 0.08, 0.414 -1.39
WSB/EiJ f 0.51277 0.22316   5 0.0998 0.4352 0.26829, 0.75758 -0.9
WSB/EiJ m 0.59058 0.36372   4 0.18186 0.6159 0.19753, 1.0783 -0.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.2425857143 0.2631679009 1.7640191757 0.7211522529
129S1/SvImJ m 1.378388 0.3113844596 1.9953563919 0.7614196081
A/J f 1.4249183333 0.284253821 1.9881308425 0.8617058242
A/J m 1.1000833333 0.284253821 1.6632958425 0.5368708242
C57BL/6J f 0.879458 0.3113844596 1.4964263919 0.2624896081
C57BL/6J m 0.8543333333 0.284253821 1.4175458425 0.2911208242
CAST/EiJ f 0.2690833333 0.284253821 0.8322958425 -0.2941291758
CAST/EiJ m 0.426425 0.3481384094 1.1162166321 -0.2633666321
CC002/UncJ f 1.1954 0.4923420602 2.1709126813 0.2198873187
CC002/UncJ m 0.31265 0.4923420602 1.2881626813 -0.6628626813
CC004/TauUncJ f 0.6086075 0.3481384094 1.2983991321 -0.0811841321
CC004/TauUncJ m 0.5564583333 0.284253821 1.1196708425 -0.0067541758
CC006/TauUncJ f 1.4323333333 0.4019956088 2.2288361023 0.6358305644
CC006/TauUncJ m 0.87404 0.4019956088 1.6705427689 0.0775372311
CC011/UncJ f 0.9612866667 0.4019956088 1.7577894356 0.1647838977
CC011/UncJ m 1.6335 0.4923420602 2.6090126813 0.6579873187
CC012/GeniUncJ f 0.8849666667 0.4019956088 1.6814694356 0.0884638977
CC012/GeniUncJ m 0.8356 0.4019956088 1.6321027689 0.0390972311
CC028/GeniUncJ f 0.3646666667 0.4019956088 1.1611694356 -0.4318361023
CC028/GeniUncJ m 0.7352666667 0.4019956088 1.5317694356 -0.0612361023
CC032/GeniUncJ f 0.888 0.4923420602 1.8635126813 -0.0875126813
CC032/GeniUncJ m 0.8730666667 0.4019956088 1.6695694356 0.0765638977
CC041/TauUncJ f 1.35711 0.284253821 1.9203225091 0.7938974909
CC041/TauUncJ m 0.86536 0.3113844596 1.4823283919 0.2483916081
CC061/GeniUncJ f 1.1665 0.4019956088 1.9630027689 0.3699972311
CC061/GeniUncJ m 1.8289666667 0.4019956088 2.6254694356 1.0324638977
NOD/ShiLtJ f 0.95352 0.3113844596 1.5704883919 0.3365516081
NOD/ShiLtJ m 0.56308 0.3113844596 1.1800483919 -0.0538883919
NZO/HlLtJ f 2.4017557143 0.2631679009 2.9231891757 1.8803222529
NZO/HlLtJ m 0.8343525 0.3481384094 1.5241441321 0.1445608679
PWK/PhJ f 0.2826616667 0.284253821 0.8458741758 -0.2805508425
PWK/PhJ m 0.22682 0.284253821 0.7900325091 -0.3363925091
WSB/EiJ f 0.512774 0.3113844596 1.1297423919 -0.1041943919
WSB/EiJ m 0.590575 0.3481384094 1.2803666321 -0.0992166321


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.3104868571 0.2038489795 1.7143874796 0.9065862347
A/J both 1.2625008333 0.2009978044 1.6607522178 0.8642494489
C57BL/6J both 0.8668956667 0.2108082757 1.2845852425 0.4492060908
CAST/EiJ both 0.3477541667 0.224722377 0.7930127506 -0.0975044172
CC002/UncJ both 0.754025 0.3481384094 1.4438166321 0.0642333679
CC004/TauUncJ both 0.5825329167 0.224722377 1.0277915006 0.1372743328
CC006/TauUncJ both 1.1531866667 0.284253821 1.7163991758 0.5899741575
CC011/UncJ both 1.2973933333 0.3178054333 1.9270840614 0.6677026052
CC012/GeniUncJ both 0.8602833333 0.284253821 1.4234958425 0.2970708242
CC028/GeniUncJ both 0.5499666667 0.284253821 1.1131791758 -0.0132458425
CC032/GeniUncJ both 0.8805333333 0.3178054333 1.5102240614 0.2508426052
CC041/TauUncJ both 1.111235 0.2108082757 1.5289245758 0.6935454242
CC061/GeniUncJ both 1.4977333333 0.284253821 2.0609458425 0.9345208242
NOD/ShiLtJ both 0.7583 0.2201820629 1.1945625337 0.3220374663
NZO/HlLtJ both 1.6180541071 0.218207296 2.0504038933 1.185704321
PWK/PhJ both 0.2547408333 0.2009978044 0.6529922178 -0.1435105511
WSB/EiJ both 0.5516745 0.2335383447 1.0144007939 0.0889482061




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA