Project measure / variable:   CSNA03   antici_incorrect_cc_acq_Binghamton

ID, description, units MPD:112907   antici_incorrect_cc_acq_Binghamton   mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC acquisition

CC025/GeniUncJCC032/GeniUncJA/JCC041/TauUncJNZO/HlLtJNOD/ShiLtJCC012/GeniUncJCC061/GeniUncJCC004/TauUncJ129S1/SvImJCC028/GeniUncJWSB/EiJCC011/UncJPWK/PhJCC002/UncJC57BL/6JCC006/TauUncJCAST/EiJ n 0.00.51.01.52.02.53.03.54.0femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means0.40247   n 0.53768   n
Median of the strain means0.33413   n 0.41304   n
SD of the strain means± 0.22143 ± 0.36568
Coefficient of variation (CV)0.5502 0.6801
Min–max range of strain means0.14308   –   0.93696   n 0.08495   –   1.3919   n
Mean sample size per strain3.9   mice 3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2213 0.2213 0.8313 0.3641
strain 15 6.4524 0.4302 1.6156 0.0825
sex:strain 15 3.597 0.2398 0.9007 0.5656
Residuals 101 26.8914 0.2663


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 0.37094 0.3531   7 0.13346 0.9519 0.05882, 1.0 -0.14
129S1/SvImJ m 0.51472 0.55096   4 0.27548 1.0704 0.08197, 1.2769 -0.06
A/J f 0.59849 0.58092   5 0.2598 0.9706 0.06897, 1.4675 0.89
A/J m 0.8865 0.82274   6 0.33588 0.9281 0.277, 2.42 0.95
C57BL/6J f 0.26075 0.08719   5 0.03899 0.3344 0.1346, 0.38 -0.64
C57BL/6J m 0.15852 0.04082   5 0.01825 0.2575 0.107, 0.22 -1.04
CAST/EiJ f 0.18925 0.15577   6 0.06359 0.8231 0.0869, 0.484 -0.96
CAST/EiJ m 0.08495 0.06986   4 0.03493 0.8224 0.0123, 0.18 -1.24
CC002/UncJ f 0.2478 0.28164   3 0.16261 1.1366 0.058, 0.5714 -0.7
CC002/UncJ m 0.1889 0.0   1   0.0 0.0 0.1889, 0.1889 -0.95
CC004/TauUncJ f 0.58374 0.67448   4 0.33724 1.1555 0.09375, 1.534 0.82
CC004/TauUncJ m 0.41858 0.30648   6 0.12512 0.7322 0.108, 0.87898 -0.33
CC006/TauUncJ f 0.14308 0.11869   3 0.06853 0.8295 0.02344, 0.2608 -1.17
CC006/TauUncJ m 0.27467 0.11143   3 0.06434 0.4057 0.158, 0.38 -0.72
CC011/UncJ f 0.1678 0.15867   2   0.1122 0.9456 0.0556, 0.28 -1.06
CC011/UncJ m 0.40525 0.49604   2   0.35075 1.224 0.0545, 0.756 -0.36
CC012/GeniUncJ f 0.51359 0.40669   3 0.2348 0.7918 0.1, 0.913 0.5
CC012/GeniUncJ m 0.67177 0.69278   3 0.39998 1.0313 0.2597, 1.4716 0.37
CC025/GeniUncJ f 0.6818 0.0   1   0.0 0.0 0.6818, 0.6818 1.26
CC025/GeniUncJ m 1.2005 0.83368   2   0.5895 0.6944 0.611, 1.79 1.81
CC028/GeniUncJ f 0.28255 0.09228   2   0.06525 0.3266 0.2173, 0.3478 -0.54
CC028/GeniUncJ m 0.35377 0.11424   3 0.06596 0.3229 0.26, 0.481 -0.5
CC032/GeniUncJ f 0.181 0.04384   2   0.031 0.2422 0.15, 0.212 -1.0
CC032/GeniUncJ m 1.3919 2.126   3 1.2274 1.5274 0.1118, 3.846 2.34
CC041/TauUncJ f 0.45144 0.39199   6 0.16003 0.8683 0.04166, 1.0492 0.22
CC041/TauUncJ m 0.95879 0.57026   5 0.25503 0.5948 0.40677, 1.8626 1.15
CC061/GeniUncJ f 0.42627 0.1788   3 0.10323 0.4195 0.2428, 0.6 0.11
CC061/GeniUncJ m 0.68267 0.89847   3 0.51873 1.3161 0.15, 1.72 0.4
NOD/ShiLtJ f 0.66822 0.45   5 0.20125 0.6734 0.25, 1.3611 1.2
NOD/ShiLtJ m 0.52816 0.23332   5 0.10434 0.4418 0.2, 0.808 -0.03
NZO/HlLtJ f 0.93696 0.70062   6 0.28603 0.7478 0.27, 2.28 2.41
NZO/HlLtJ m 0.4075 0.20222   4 0.10111 0.4962 0.13, 0.6 -0.36
PWK/PhJ f 0.24345 0.21439   4 0.1072 0.8806 0.0613, 0.48 -0.72
PWK/PhJ m 0.22023 0.12958   6 0.0529 0.5884 0.07216, 0.41463 -0.87
WSB/EiJ f 0.29731 0.18873   4 0.09437 0.6348 0.1, 0.54737 -0.47
WSB/EiJ m 0.33079 0.19883   4 0.09942 0.6011 0.13043, 0.60577 -0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.37094 0.1950279468 0.7578229845 -0.0159429845
129S1/SvImJ m 0.5147175 0.257997723 1.0265155818 0.0029194182
A/J f 0.598494 0.2307601787 1.0562601207 0.1407278793
A/J m 0.8865 0.2106542587 1.3043813839 0.4686186161
C57BL/6J f 0.26075 0.2307601787 0.7185161207 -0.1970161207
C57BL/6J m 0.158522 0.2307601787 0.6162881207 -0.2992441207
CAST/EiJ f 0.18925 0.2106542587 0.6071313839 -0.2286313839
CAST/EiJ m 0.08495 0.257997723 0.5967480818 -0.4268480818
CC004/TauUncJ f 0.5837375 0.257997723 1.0955355818 0.0719394182
CC004/TauUncJ m 0.4185816667 0.2106542587 0.8364630506 0.0007002828
CC006/TauUncJ f 0.14308 0.2979101096 0.7340535206 -0.4478935206
CC006/TauUncJ m 0.2746666667 0.2979101096 0.8656401872 -0.3163068539
CC011/UncJ f 0.1678 0.3648638789 0.8915917885 -0.5559917885
CC011/UncJ m 0.40525 0.3648638789 1.1290417885 -0.3185417885
CC012/GeniUncJ f 0.5135933333 0.2979101096 1.1045668539 -0.0773801872
CC012/GeniUncJ m 0.6717666667 0.2979101096 1.2627401872 0.0807931461
CC028/GeniUncJ f 0.28255 0.3648638789 1.0063417885 -0.4412417885
CC028/GeniUncJ m 0.3537666667 0.2979101096 0.9447401872 -0.2372068539
CC032/GeniUncJ f 0.181 0.3648638789 0.9047917885 -0.5427917885
CC032/GeniUncJ m 1.3918666667 0.2979101096 1.9828401872 0.8008931461
CC041/TauUncJ f 0.4514433333 0.2106542587 0.8693247172 0.0335619494
CC041/TauUncJ m 0.958794 0.2307601787 1.4165601207 0.5010278793
CC061/GeniUncJ f 0.4262666667 0.2979101096 1.0172401872 -0.1647068539
CC061/GeniUncJ m 0.6826666667 0.2979101096 1.2736401872 0.0916931461
NOD/ShiLtJ f 0.66822 0.2307601787 1.1259861207 0.2104538793
NOD/ShiLtJ m 0.528156 0.2307601787 0.9859221207 0.0703898793
NZO/HlLtJ f 0.9369633333 0.2106542587 1.3548447172 0.5190819494
NZO/HlLtJ m 0.4075 0.257997723 0.9192980818 -0.1042980818
PWK/PhJ f 0.24345 0.257997723 0.7552480818 -0.2683480818
PWK/PhJ m 0.2202266667 0.2106542587 0.6381080506 -0.1976547172
WSB/EiJ f 0.297315 0.257997723 0.8091130818 -0.2144830818
WSB/EiJ m 0.3307925 0.257997723 0.8425905818 -0.1810055818


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.44282875 0.1617086308 0.7636151744 0.1220423256
A/J both 0.742497 0.1562253795 1.0524061287 0.4325878713
C57BL/6J both 0.209636 0.1631720872 0.5333255281 -0.1140535281
CAST/EiJ both 0.1371 0.1665368141 0.4674642412 -0.1932642412
CC004/TauUncJ both 0.5011595833 0.1665368141 0.8315238246 0.1707953421
CC006/TauUncJ both 0.2088733333 0.2106542587 0.6267547172 -0.2090080506
CC011/UncJ both 0.286525 0.257997723 0.7983230818 -0.2252730818
CC012/GeniUncJ both 0.59268 0.2106542587 1.0105613839 0.1747986161
CC028/GeniUncJ both 0.3181583333 0.2355186211 0.7853639238 -0.1490472571
CC032/GeniUncJ both 0.7864333333 0.2355186211 1.2536389238 0.3192277429
CC041/TauUncJ both 0.7051186667 0.1562253795 1.0150277954 0.395209538
CC061/GeniUncJ both 0.5544666667 0.2106542587 0.9723480506 0.1365852828
NOD/ShiLtJ both 0.598188 0.1631720872 0.9218775281 0.2744984719
NZO/HlLtJ both 0.6722316667 0.1665368141 1.0025959079 0.3418674254
PWK/PhJ both 0.2318383333 0.1665368141 0.5622025746 -0.0985259079
WSB/EiJ both 0.31405375 0.1824319395 0.6759496442 -0.0478421442




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA