Project measure / variable:   CSNA03   antici_correct_cc_acq_Binghamton

ID, description, units MPD:112905   antici_correct_cc_acq_Binghamton   mean number of anticipatory nose pokes made in correct flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in correct flanking hole without prior successful nose poke in central hole (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means0.49836   n 0.59843   n
Median of the strain means0.42819   n 0.50602   n
SD of the strain means± 0.34317 ± 0.36938
Coefficient of variation (CV)0.6886 0.6173
Min–max range of strain means0.0764   –   1.1109   n 0.15792   –   1.501   n
Mean sample size per strain4.1   mice 3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0457 0.0457 0.2234 0.6374
strain 16 11.5675 0.723 3.5312 < 0.0001
sex:strain 16 2.0793 0.13 0.6347 0.8492
Residuals 107 21.9069 0.2047


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.56988 0.5929   7 0.22409 1.0404 0.116, 1.8167 0.21
129S1/SvImJ m 0.87891 0.7522   5 0.33639 0.8558 0.14754, 2.014 0.76
A/J f 0.9991 0.63424   6 0.25893 0.6348 0.41379, 2.193 1.46
A/J m 1.0258 0.54471   6 0.22238 0.531 0.45, 1.75 1.16
C57BL/6J f 0.45409 0.17936   5 0.08021 0.395 0.2, 0.63115 -0.13
C57BL/6J m 0.34176 0.24728   6 0.10095 0.7236 0.04167, 0.6428 -0.69
CAST/EiJ f 0.16607 0.05364   7 0.02027 0.323 0.1, 0.2476 -0.97
CAST/EiJ m 0.15792 0.11174   4 0.05587 0.7076 0.0123, 0.25 -1.19
CC002/UncJ f 0.2156 0.16826   3 0.09714 0.7804 0.058, 0.3928 -0.82
CC002/UncJ m 0.4025 0.49851   2   0.3525 1.2385 0.05, 0.755 -0.53
CC004/TauUncJ f 0.43521 0.26636   4 0.13318 0.612 0.188, 0.7272 -0.18
CC004/TauUncJ m 0.59645 0.29306   6 0.11964 0.4913 0.289, 1.0573 -0.01
CC006/TauUncJ f 0.0764 0.09702   2   0.0686 1.2698 0.0078, 0.145 -1.23
CC006/TauUncJ m 0.24893 0.16995   3 0.09812 0.6827 0.1328, 0.444 -0.95
CC011/UncJ f 0.36667 0.20429   3 0.11795 0.5571 0.22, 0.6 -0.38
CC011/UncJ m 0.71845 0.60465   2   0.42755 0.8416 0.2909, 1.146 0.32
CC012/GeniUncJ f 0.42117 0.10428   3 0.06021 0.2476 0.3055, 0.508 -0.22
CC012/GeniUncJ m 0.64833 0.55   3 0.31754 0.8483 0.311, 1.283 0.14
CC025/GeniUncJ f 1.09 0.0   1   0.0 0.0 1.09, 1.09 1.72
CC025/GeniUncJ m 1.501 1.8088   2   1.279 1.205 0.222, 2.78 2.44
CC028/GeniUncJ f 0.1303 0.09235   2   0.0653 0.7087 0.065, 0.1956 -1.07
CC028/GeniUncJ m 0.2599 0.14709   3 0.08492 0.5659 0.1067, 0.4 -0.92
CC032/GeniUncJ f 0.2025 0.07425   2   0.0525 0.3666 0.15, 0.255 -0.86
CC032/GeniUncJ m 0.3785 0.3738   3 0.21582 0.9876 0.069, 0.7938 -0.6
CC041/TauUncJ f 1.1109 0.97254   6 0.39704 0.8755 0.0909, 2.5394 1.78
CC041/TauUncJ m 0.84722 0.30075   5 0.1345 0.355 0.5254, 1.2901 0.67
CC061/GeniUncJ f 0.5911 0.66664   3 0.38489 1.1278 0.1, 1.35 0.27
CC061/GeniUncJ m 1.1696 0.75111   3 0.43365 0.6422 0.3023, 1.6065 1.55
NOD/ShiLtJ f 0.66642 0.4562   5 0.20402 0.6845 0.24, 1.1611 0.49
NOD/ShiLtJ m 0.61843 0.42789   4 0.21394 0.6919 0.1746, 1.0751 0.05
NZO/HlLtJ f 0.97792 0.70025   5 0.31316 0.7161 0.2168, 1.8478 1.4
NZO/HlLtJ m 0.41559 0.23676   4 0.11838 0.5697 0.18571, 0.7 -0.49
PWK/PhJ f 0.18303 0.16886   5 0.07551 0.9226 0.03, 0.42 -0.92
PWK/PhJ m 0.18113 0.09349   5 0.04181 0.5162 0.09, 0.31297 -1.13
WSB/EiJ f 0.31408 0.20752   5 0.0928 0.6607 0.09, 0.6315 -0.54
WSB/EiJ m 0.38132 0.2468   4 0.1234 0.6472 0.02174, 0.576 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.5698771429 0.1710210643 0.9089064567 0.230847829
129S1/SvImJ m 0.878908 0.2023548522 1.280052894 0.477763106
A/J f 0.9990983333 0.184723862 1.3652918454 0.6329048213
A/J m 1.0258333333 0.184723862 1.3920268454 0.6596398213
C57BL/6J f 0.454088 0.2023548522 0.855232894 0.052943106
C57BL/6J m 0.3417616667 0.184723862 0.7079551787 -0.0244318454
CAST/EiJ f 0.1660714286 0.1710210643 0.5051007425 -0.1729578853
CAST/EiJ m 0.1579175 0.2262396026 0.6064111259 -0.2905761259
CC002/UncJ f 0.2156 0.2612389909 0.7334758312 -0.3022758312
CC002/UncJ m 0.4025 0.3199511143 1.0367657683 -0.2317657683
CC004/TauUncJ f 0.4352075 0.2262396026 0.8837011259 -0.0132861259
CC004/TauUncJ m 0.5964483333 0.184723862 0.9626418454 0.2302548213
CC006/TauUncJ f 0.0764 0.3199511143 0.7106657683 -0.5578657683
CC006/TauUncJ m 0.2489333333 0.2612389909 0.7668091646 -0.2689424979
CC011/UncJ f 0.3666666667 0.2612389909 0.8845424979 -0.1512091646
CC011/UncJ m 0.71845 0.3199511143 1.3527157683 0.0841842317
CC012/GeniUncJ f 0.4211666667 0.2612389909 0.9390424979 -0.0967091646
CC012/GeniUncJ m 0.64833 0.2612389909 1.1662058312 0.1304541688
CC028/GeniUncJ f 0.1303 0.3199511143 0.7645657683 -0.5039657683
CC028/GeniUncJ m 0.2599 0.2612389909 0.7777758312 -0.2579758312
CC032/GeniUncJ f 0.2025 0.3199511143 0.8367657683 -0.4317657683
CC032/GeniUncJ m 0.3785 0.2612389909 0.8963758312 -0.1393758312
CC041/TauUncJ f 1.1108766667 0.184723862 1.4770701787 0.7446831546
CC041/TauUncJ m 0.847218 0.2023548522 1.248362894 0.446073106
CC061/GeniUncJ f 0.5911 0.2612389909 1.1089758312 0.0732241688
CC061/GeniUncJ m 1.1696 0.2612389909 1.6874758312 0.6517241688
NOD/ShiLtJ f 0.66642 0.2023548522 1.067564894 0.265275106
NOD/ShiLtJ m 0.618425 0.2262396026 1.0669186259 0.1699313741
NZO/HlLtJ f 0.97792 0.2023548522 1.379064894 0.576775106
NZO/HlLtJ m 0.415595 0.2262396026 0.8640886259 -0.0328986259
PWK/PhJ f 0.183026 0.2023548522 0.584170894 -0.218118894
PWK/PhJ m 0.181126 0.2023548522 0.582270894 -0.220018894
WSB/EiJ f 0.31408 0.2023548522 0.715224894 -0.087064894
WSB/EiJ m 0.38132 0.2262396026 0.8298136259 -0.0671736259


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.7243925714 0.1324723468 0.9870035487 0.4617815941
A/J both 1.0124658333 0.1306194955 1.271403749 0.7535279177
C57BL/6J both 0.3979248333 0.1369948826 0.6695012104 0.1263484563
CAST/EiJ both 0.1619944643 0.1418031754 0.4431027211 -0.1191137925
CC002/UncJ both 0.30905 0.2065275562 0.718466793 -0.100366793
CC004/TauUncJ both 0.5158279167 0.1460370355 0.8053293073 0.226326526
CC006/TauUncJ both 0.1626666667 0.2065275562 0.5720834596 -0.2467501263
CC011/UncJ both 0.5425583333 0.2065275562 0.9519751263 0.1331415404
CC012/GeniUncJ both 0.5347483333 0.184723862 0.9009418454 0.1685548213
CC028/GeniUncJ both 0.1951 0.2065275562 0.604516793 -0.214316793
CC032/GeniUncJ both 0.2905 0.2065275562 0.699916793 -0.118916793
CC041/TauUncJ both 0.9790473333 0.1369948826 1.2506237104 0.7074709563
CC061/GeniUncJ both 0.88035 0.184723862 1.2465435121 0.5141564879
NOD/ShiLtJ both 0.6424225 0.1517661392 0.9432811705 0.3415638295
NZO/HlLtJ both 0.6967575 0.1517661392 0.9976161705 0.3958988295
PWK/PhJ both 0.182076 0.1430864882 0.4657282748 -0.1015762748
WSB/EiJ both 0.3477 0.1517661392 0.6485586705 0.0468413295




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA