Project measure / variable:   CSNA03   total_time_cc_rev_Binghamton

ID, description, units MPD:112902   total_time_cc_rev_Binghamton   total time for all trials (reversal learning assay), CC   [min]  reversal  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total time for all trials (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains18 strains
Mean of the strain means258.6   min 221.2   min
Median of the strain means245.2   min 203.8   min
SD of the strain means± 165.7 ± 117.0
Coefficient of variation (CV)0.6409 0.5292
Min–max range of strain means64.84   –   679.6   min 62.74   –   432.0   min
Mean sample size per strain4.6   mice 4.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 35285.0227 35285.0227 0.6195 0.4328
strain 16 1883758.217 117734.8886 2.0672 0.0143
sex:strain 16 967028.9718 60439.3107 1.0612 0.4001
Residuals 115 6549727.7565 56954.1544


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 245.2 186.8   7 70.59 0.7617 70.03, 595.9 -0.08
129S1/SvImJ m 406.5 255.4   5 114.2 0.6284 142.1, 805.9 1.58
A/J f 679.6 321.6   6 131.3 0.4733 230.4, 1199.0 2.54
A/J m 269.8 217.7   6 88.86 0.8067 43.78, 591.2 0.42
C57BL/6J f 261.6 240.8   6 98.3 0.9205 55.8, 710.3 0.02
C57BL/6J m 357.7 383.6   6 156.6 1.0724 113.8, 1126.0 1.17
CAST/EiJ f 162.7 152.2   7 57.52 0.9355 21.66, 436.8 -0.58
CAST/EiJ m 146.4 26.762   4 13.381 0.1828 106.8, 162.9 -0.64
CC002/UncJ f 564.0 603.8   2   427.0 1.0705 137.1, 991.0 1.84
CC002/UncJ m 270.0 319.9   2   226.2 1.1846 43.845, 496.2 0.42
CC004/TauUncJ f 94.59 148.9   4 74.43 1.5736 13.428, 317.7 -0.99
CC004/TauUncJ m 119.9 71.9   7 27.176 0.5996 16.13, 209.7 -0.87
CC006/TauUncJ f 94.35 62.87   3 36.295 0.6663 21.838, 133.6 -0.99
CC006/TauUncJ m 121.5 86.93   3 50.19 0.7154 45.923, 216.5 -0.85
CC011/UncJ f 299.3 248.8   3 143.7 0.8314 14.717, 475.9 0.25
CC011/UncJ m 86.09 70.72   2   50.01 0.8214 36.087, 136.1 -1.15
CC012/GeniUncJ f 388.2 287.2   3 165.8 0.7398 57.99, 579.8 0.78
CC012/GeniUncJ m 386.9 485.2   3 280.1 1.2541 48.498, 942.8 1.42
CC025/GeniUncJ m 82.72 33.34   2   23.575 0.403 59.15, 106.3 -1.18
CC028/GeniUncJ f 162.2 122.7   3 70.86 0.7567 53.11, 295.1 -0.58
CC028/GeniUncJ m 163.7 66.39   3 38.33 0.4055 92.51, 223.9 -0.49
CC032/GeniUncJ f 199.1 215.0   2   152.0 1.0801 47.032, 351.1 -0.36
CC032/GeniUncJ m 222.0 195.0   3 112.6 0.8783 54.83, 436.2 0.01
CC041/TauUncJ f 283.0 376.7   6 153.8 1.3314 35.895, 1017.0 0.15
CC041/TauUncJ m 216.5 234.1   5 104.7 1.081 38.322, 529.9 -0.04
CC061/GeniUncJ f 64.84 60.88   3 35.151 0.939 27.628, 135.1 -1.17
CC061/GeniUncJ m 295.9 319.2   3 184.3 1.0785 16.792, 643.9 0.64
NOD/ShiLtJ f 243.3 188.7   5 84.41 0.7757 83.38, 561.7 -0.09
NOD/ShiLtJ m 149.6 153.1   5 68.46 1.0229 17.548, 380.7 -0.61
NZO/HlLtJ f 252.0 182.3   7 68.9 0.7233 20.563, 438.1 -0.04
NZO/HlLtJ m 432.0 540.3   4 270.2 1.2506 105.8, 1235.0 1.8
PWK/PhJ f 79.83 69.14   6 28.227 0.8661 23.093, 206.3 -1.08
PWK/PhJ m 62.74 19.534   6 7.9748 0.3114 28.687, 82.96 -1.35
WSB/EiJ f 322.8 109.5   5 48.987 0.3393 225.0, 474.6 0.39
WSB/EiJ m 191.0 200.3   4 100.1 1.0486 87.81, 491.4 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 245.18 90.201484312 423.851780344 66.508219656
129S1/SvImJ m 406.46 106.7278355488 617.8673015007 195.0526984993
A/J f 679.6 97.4287384063 872.5875797554 486.6124202446
A/J m 269.795 97.4287384063 462.7825797554 76.8074202446
C57BL/6J f 261.5916666667 97.4287384063 454.579246422 68.6040869113
C57BL/6J m 357.6833333333 97.4287384063 550.6709130887 164.695753578
CAST/EiJ f 162.6731428571 90.201484312 341.3449232011 -15.9986374868
CAST/EiJ m 146.4 119.3253476892 382.7605485477 -89.9605485477
CC002/UncJ f 564.05 168.751525037 898.3142933661 229.7857066339
CC002/UncJ m 270.0225 168.751525037 604.2867933661 -64.2417933661
CC004/TauUncJ f 94.59075 119.3253476892 330.9512985477 -141.7697985477
CC004/TauUncJ m 119.9142857143 90.201484312 298.5860660583 -58.7574946297
CC006/TauUncJ f 94.346 137.7850432191 367.2716526596 -178.5796526596
CC006/TauUncJ m 121.5076666667 137.785043219 394.4333193263 -151.417985993
CC011/UncJ f 299.3056666667 137.7850432191 572.2313193263 26.380014007
CC011/UncJ m 86.0935 168.751525037 420.3577933661 -248.1707933661
CC012/GeniUncJ f 388.1633333333 137.785043219 661.088985993 115.2376806737
CC012/GeniUncJ m 386.8993333333 137.7850432191 659.824985993 113.9736806737
CC028/GeniUncJ f 162.2033333333 137.7850432191 435.128985993 -110.7223193263
CC028/GeniUncJ m 163.7366666667 137.7850432191 436.6623193263 -109.188985993
CC032/GeniUncJ f 199.066 168.751525037 533.3302933661 -135.1982933661
CC032/GeniUncJ m 222.01 137.7850432191 494.9356526596 -50.9156526596
CC041/TauUncJ f 282.9616666667 97.4287384063 475.9492464221 89.9740869113
CC041/TauUncJ m 216.549 106.7278355488 427.9563015007 5.1416984993
CC061/GeniUncJ f 64.8393333333 137.7850432191 337.764985993 -208.0863193263
CC061/GeniUncJ m 295.9306666667 137.7850432191 568.8563193263 23.005014007
NOD/ShiLtJ f 243.316 106.7278355488 454.7233015007 31.9086984993
NOD/ShiLtJ m 149.643 106.7278355488 361.0503015007 -61.7643015007
NZO/HlLtJ f 252.0318571429 90.201484312 430.7036374868 73.3600767989
NZO/HlLtJ m 432.025 119.3253476892 668.3855485477 195.6644514523
PWK/PhJ f 79.8306666667 97.4287384063 272.818246422 -113.1569130887
PWK/PhJ m 62.7395 97.4287384063 255.7270797554 -130.2480797554
WSB/EiJ f 322.84 106.7278355488 534.2473015007 111.4326984993
WSB/EiJ m 191.0025 119.3253476892 427.3630485477 -45.3580485477


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 325.82 69.8697693087 464.2185659419 187.4214340581
A/J both 474.6975 68.8925216095 611.1603263298 338.2346736702
C57BL/6J both 309.6375 68.8925216095 446.1003263298 173.1746736702
CAST/EiJ both 154.5365714286 74.791119749 302.683385435 6.3897574221
CC002/UncJ both 417.03625 119.3253476892 653.3967985477 180.6757014523
CC004/TauUncJ both 107.2525178571 74.791119749 255.3993318636 -40.8942961493
CC006/TauUncJ both 107.9268333333 97.4287384063 300.9144130887 -85.060746422
CC011/UncJ both 192.6995833333 108.9286410192 408.4662569064 -23.0670902398
CC012/GeniUncJ both 387.5313333333 97.4287384063 580.5189130887 194.5437535779
CC028/GeniUncJ both 162.97 97.4287384063 355.9575797554 -30.0175797554
CC032/GeniUncJ both 210.538 108.9286410192 426.3046735731 -5.2286735731
CC041/TauUncJ both 249.7553333333 72.2550862368 392.8787530343 106.6319136323
CC061/GeniUncJ both 180.385 97.4287384063 373.3725797554 -12.6025797554
NOD/ShiLtJ both 196.4795 75.4679762579 345.9670364835 46.9919635165
NZO/HlLtJ both 342.0284285714 74.791119749 490.1752425779 193.881614565
PWK/PhJ both 71.2850833333 68.8925216095 207.7479096631 -65.1777429965
WSB/EiJ both 256.92125 80.0458766616 415.4767261255 98.3657738745




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA