Project measure / variable:   CSNA03   pct_omit_cc_acq_Binghamton

ID, description, units MPD:112899   pct_omit_cc_acq_Binghamton   percentage of responses considered omissions (reversal learning assay), CC   [%]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses considered omissions (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means46.731   % 43.234   %
Median of the strain means34.998   % 33.315   %
SD of the strain means± 34.436 ± 32.972
Coefficient of variation (CV)0.7369 0.7626
Min–max range of strain means10.581   –   123.7   % 4.0528   –   105.9   %
Mean sample size per strain4.3   mice 3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1060.2994 1060.2994 0.4964 0.4826
strain 15 114719.6581 7647.9772 3.5807 < 0.0001
sex:strain 15 35839.7188 2389.3146 1.1186 0.3488
Residuals 108 230676.5384 2135.8939


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 74.84 42.905   7 16.217 0.5733 18.605, 130.6 0.82
129S1/SvImJ m 90.0 52.24   5 23.362 0.5804 16.923, 147.7 1.42
A/J f 123.7 75.95   6 31.005 0.614 42.604, 196.9 2.24
A/J m 74.41 51.93   6 21.2 0.6979 18.072, 147.2 0.95
C57BL/6J f 41.058 34.8   6 14.207 0.8476 3.0769, 105.8 -0.16
C57BL/6J m 42.558 67.05   6 27.373 1.5755 4.3478, 178.6 -0.02
CAST/EiJ f 90.6 54.42   7 20.57 0.6007 30.435, 187.8 1.27
CAST/EiJ m 97.29 68.66   4 34.329 0.7057 45.946, 196.3 1.64
CC002/UncJ f 30.198 21.232   3 12.259 0.7031 14.754, 54.41 -0.48
CC002/UncJ m 6.3889 1.9642   2   1.3889 0.3074 5.0, 7.7778 -1.12
CC004/TauUncJ f 31.36 44.729   4 22.365 1.4263 2.6515, 97.14 -0.45
CC004/TauUncJ m 20.502 20.86   7 7.8844 1.0175 5.0, 57.76 -0.69
CC006/TauUncJ f 17.435 5.5235   3 3.189 0.3168 13.043, 23.636 -0.85
CC006/TauUncJ m 25.49 32.97   3 19.035 1.2934 0.83333, 62.94 -0.54
CC011/UncJ f 13.407 1.9905   2   1.4075 0.1485 12.0, 14.815 -0.97
CC011/UncJ m 105.9 87.3   3 50.4 0.8243 14.634, 188.6 1.9
CC012/GeniUncJ f 10.581 8.1097   3 4.6822 0.7664 2.7778, 18.966 -1.05
CC012/GeniUncJ m 53.31 54.29   3 31.345 1.0184 21.854, 116.0 0.31
CC025/GeniUncJ f 38.636 0.0   1   0.0 0.0 38.636, 38.636 -0.24
CC025/GeniUncJ m 17.717 22.437   2   15.865 1.2664 1.8519, 33.582 -0.77
CC028/GeniUncJ f 15.797 12.491   3 7.2115 0.7907 6.5217, 30.0 -0.9
CC028/GeniUncJ m 36.631 52.46   3 30.285 1.432 4.0161, 97.14 -0.2
CC032/GeniUncJ f 107.4 0.0   1   0.0 0.0 107.4, 107.4 1.76
CC032/GeniUncJ m 29.998 4.4654   3 2.5781 0.1489 26.316, 34.965 -0.4
CC041/TauUncJ f 54.2 68.22   6 27.851 1.2586 4.3478, 188.5 0.22
CC041/TauUncJ m 59.2 39.751   5 17.777 0.6715 11.189, 111.5 0.48
CC061/GeniUncJ f 50.6 49.245   3 28.432 0.9732 15.0, 106.8 0.11
CC061/GeniUncJ m 72.94 22.033   2   15.58 0.3021 57.36, 88.52 0.9
NOD/ShiLtJ f 21.4 15.763   5 7.0496 0.7366 9.0909, 49.0 -0.74
NOD/ShiLtJ m 13.193 10.41   4 5.2049 0.7891 3.2787, 27.2 -0.91
NZO/HlLtJ f 77.65 68.27   7 25.803 0.8791 6.9767, 159.2 0.9
NZO/HlLtJ m 8.6448 5.0257   4 2.5129 0.5814 5.0, 15.789 -1.05
PWK/PhJ f 17.84 15.038   5 6.7253 0.8429 5.1282, 35.0 -0.84
PWK/PhJ m 4.0528 4.8172   4 2.4086 1.1886 0.76336, 11.215 -1.19
WSB/EiJ f 24.448 16.221   5 7.2544 0.6635 10.465, 48.214 -0.65
WSB/EiJ m 19.978 16.268   4 8.1342 0.8143 1.0417, 39.831 -0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 74.8442857143 17.4679047491 109.4687033169 40.2198681117
129S1/SvImJ m 90.0006 20.6683036278 130.968763396 49.032436604
A/J f 123.6956666667 18.8674935372 161.0943120526 86.2970212807
A/J m 74.4053333333 18.8674935372 111.8039787193 37.0066879474
C57BL/6J f 41.0583166667 18.8674935372 78.4569620526 3.6596712807
C57BL/6J m 42.5576333333 18.8674935372 79.9562787193 5.1589879474
CAST/EiJ f 90.5961428571 17.4679047491 125.2205604597 55.9717252546
CAST/EiJ m 97.2915 23.1078659457 143.0952991334 51.4877008666
CC002/UncJ f 30.1976666667 26.6826652483 83.0873381859 -22.6920048525
CC002/UncJ m 6.3889 32.6794574179 71.1652539427 -58.3874539427
CC004/TauUncJ f 31.360025 23.1078659457 77.1638241334 -14.4437741334
CC004/TauUncJ m 20.5019142857 17.4679047491 55.1263318883 -14.1225033169
CC006/TauUncJ f 17.4346666667 26.6826652483 70.3243381859 -35.4550048525
CC006/TauUncJ m 25.4904433333 26.6826652483 78.3801148525 -27.3992281859
CC011/UncJ f 13.4075 32.6794574179 78.1838539427 -51.3688539427
CC011/UncJ m 105.9113333333 26.6826652483 158.8010048525 53.0216618141
CC012/GeniUncJ f 10.5812666667 26.6826652483 63.4709381859 -42.3084048525
CC012/GeniUncJ m 53.3106666667 26.6826652483 106.2003381859 0.4209951475
CC028/GeniUncJ f 15.7972333333 26.6826652483 68.6869048525 -37.0924381859
CC028/GeniUncJ m 36.6313333333 26.6826652483 89.5210048525 -16.2583381859
CC041/TauUncJ f 54.2036333333 18.8674935372 91.6022787193 16.8049879474
CC041/TauUncJ m 59.1962 20.6683036278 100.164363396 18.228036604
CC061/GeniUncJ f 50.6 26.6826652483 103.4896715192 -2.2896715192
CC061/GeniUncJ m 72.94 32.6794574179 137.7163539427 8.1636460573
NOD/ShiLtJ f 21.39978 20.6683036278 62.367943396 -19.568383396
NOD/ShiLtJ m 13.1928 23.1078659457 58.9965991334 -32.6109991334
NZO/HlLtJ f 77.6548142857 17.4679047491 112.2792318883 43.0303966831
NZO/HlLtJ m 8.644825 23.1078659457 54.4486241334 -37.1589741334
PWK/PhJ f 17.84024 20.6683036278 58.808403396 -23.127923396
PWK/PhJ m 4.05284 23.1078659457 49.8566391334 -41.7509591334
WSB/EiJ f 24.4478 20.6683036278 65.415963396 -16.520363396
WSB/EiJ m 19.977675 23.1078659457 65.7814741334 -25.8261241334


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 82.4224428571 13.5305808373 109.2424014065 55.6024843078
A/J both 99.0505 13.3413326242 125.4953357596 72.6056642404
C57BL/6J both 41.807975 13.3413326242 68.2528107596 15.3631392404
CAST/EiJ both 93.9438214286 14.4836214816 122.6528718717 65.2347709855
CC002/UncJ both 18.2932833333 21.0944990571 60.106240008 -23.5196733414
CC004/TauUncJ both 25.9309696429 14.4836214816 54.6400200859 -2.7780808002
CC006/TauUncJ both 21.462555 18.8674935372 58.861200386 -15.936090386
CC011/UncJ both 59.6594166667 21.0944990571 101.4723733414 17.846459992
CC012/GeniUncJ both 31.9459666667 18.8674935372 69.3446120526 -5.4526787193
CC028/GeniUncJ both 26.2142833333 18.8674935372 63.6129287193 -11.1843620526
CC041/TauUncJ both 56.6999166667 13.9925077026 84.4354943997 28.9643389336
CC061/GeniUncJ both 61.77 21.0944990571 103.5829566747 19.9570433253
NOD/ShiLtJ both 17.29629 15.5012277209 48.022412547 -13.429832547
NZO/HlLtJ both 43.1498196429 14.4836214816 71.8588700859 14.4407691998
PWK/PhJ both 10.94654 15.5012277209 41.672662547 -19.779582547
WSB/EiJ both 22.2127375 15.5012277209 52.938860047 -8.513385047




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA